CX043360

Overview
NameCX043360
Unique NameCX043360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:814..1457. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.941e-48
Identity = 93/119 (78.15%), Postives = 105/119 (88.24%), Query Frame = 1
Query:    1 LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 357
            +Q AMGTLDGIIDTVSA HP+LPLLGLLKSQGK+++VG PDKPLELPV  L+ GRK ++GS  GGMKETQEMIDFAAKH+I +DIEV+ MDYVNTAMERL K DVRYRFVID+ANTL A
Sbjct:  242 MQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.647e-48
Identity = 93/117 (79.49%), Postives = 105/117 (89.74%), Query Frame = 1
Query:    1 LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 351
            +Q A+GT+DGIIDTVSA HP+LPL+GLL S GKLV+VGAP+KPLELPV  L+MGRK V+GS  GGMKETQEMIDFAA+HNITADIEVI +DY+NTAMERL KADVRYRFVIDI NTL
Sbjct:  239 MQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTL 355          
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.391e-46
Identity = 88/117 (75.21%), Postives = 106/117 (90.60%), Query Frame = 1
Query:    1 LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 351
            +Q A GTL GIIDTVSA+HP++PLLGLLK  GKLV+VGAP+KPLELPV  L+MGRK ++GS+ GG+KETQEM+DFAA+HNITAD+EVI +DYVNTAMERL K+DVRYRFVID+ANT+
Sbjct:  218 MQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTI 334          
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.391e-46
Identity = 91/120 (75.83%), Postives = 105/120 (87.50%), Query Frame = 1
Query:    1 LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 360
            ++ AMGT+DGIIDTVSA HP+LPLLGLLK++GKLV+VGAP +PLELPV  LI GRK V GS  GG+KETQEM+D A KHNITADIE+IS DYVNTAMERLAKADV+YRFVID+ANT+  T
Sbjct:  237 MKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356          
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.623e-45
Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 1
Query:    1 LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 351
            ++ AMGT+DGIIDTVSA H +LPLLGLLK +GKLV+VGAP+KPLELPV+ LI  RK V GS  GG+KETQEMID A KHNITADIE+IS DYVNTAMERL KADVRYRFVID+ANTL
Sbjct:  237 IKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTL 353          
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.302e-44
Identity = 87/121 (71.90%), Postives = 106/121 (87.60%), Query Frame = 1
Query:    1 LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 363
            ++ AMGT+DGIIDTVSA H I PL+GLLKS GKLVL+GA +KP ++   SLI+GRK+++GS  GGM+ETQEMIDFAA+H I A+IE+ISMDYVNTAM+RLAK DVRYRFVIDI+NTLAAT+
Sbjct:  242 MKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAATR 362          
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.469e-43
Identity = 84/117 (71.79%), Postives = 98/117 (83.76%), Query Frame = 1
Query:    1 LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 351
            ++GA  +LDGIIDTV   HP+ PL  LLK  GKLV+VGAP+KP ELPV SL+ GRK + G+  GG+KETQEM+DFAAKHNITAD+EVI MDYVNTAMERL K+DVRYRFVIDIANT+
Sbjct:  241 MKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTM 357          
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.469e-43
Identity = 82/117 (70.09%), Postives = 101/117 (86.32%), Query Frame = 1
Query:    1 LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 351
            +Q A+GTLDGIIDTVSA HPI+PLL LLK  GKL++VG PDKPL+LPV  LI GR+T++GS  GG+KETQEMIDFAAK+NI AD+EVI +DY+NTAM+RL K+DV+YRFVID+  +L
Sbjct:  241 MQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSL 357          
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 7.143e-43
Identity = 82/118 (69.49%), Postives = 101/118 (85.59%), Query Frame = 1
Query:    1 LQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLA 354
            ++ A+GT+D IIDT+SAVH + PLLGLLK  GKL+ +G P+KPLELP+  L++GRK V GS  GGMKETQEM+DF AKHNITADIE+I MD +NTAMERLAK+DVRYRFVID+AN+L+
Sbjct:  241 MKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSLS 358          
BLAST of CX043360 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.732e-41
Identity = 82/114 (71.93%), Postives = 96/114 (84.21%), Query Frame = 1
Query:   19 TLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 360
            TLDGIIDTVSA H I+PL+GLLKS GKLVL+GA +KPLELP   LI+GRK V G+  GG+KETQEMIDF+ KHN+  +IEV+ MDYVN AM+RLAKADV+YRFVID+ANTL  T
Sbjct:  249 TLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
The following BLAST results are available for this feature:
BLAST of CX043360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MTDH_MESCR1.941e-4878.15Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_FRAAN5.647e-4879.49Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_PETCR1.391e-4675.21Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ARATH1.391e-4675.83Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH8_ARATH2.623e-4577.78Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH6_ARATH1.302e-4471.90Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
MTDH_APIGR5.469e-4371.79Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
GEDH1_OCIBA5.469e-4370.09Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH9_ARATH7.143e-4369.49Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH3_STYHU8.732e-4171.93Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10E10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10E10-J20-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043360 ID=CX043360; Name=CX043360; organism=Citrus sinensis; type=EST; length=644bp
TTGCAGGGTGCCATGGGCACATTGGATGGTATTATTGACACGGTGTCCGC
TGTGCACCCCATTTTGCCATTGCTCGGTCTATTAAAGTCCCAGGGCAAGC
TTGTTCTGGTTGGTGCTCCGGACAAGCCACTCGAGCTACCTGTGATTTCC
TTAATTATGGGGAGGAAGACGGTGTCAGGGAGCAGCACTGGGGGAATGAA
AGAGACGCAAGAGATGATTGATTTTGCAGCAAAACACAATATAACAGCTG
ACATTGAGGTTATTTCGATGGATTATGTCAATACGGCAATGGAGCGGCTC
GCCAAGGCTGATGTTCGGTATCGATTTGTCATTGATATTGCAAACACCTT
GGCCGCCACCAAACCTTGAAGAATCAGAATCAGAATCAGATTGGTGTCTT
CAATTCACAACTTTGTTCCATGATCCACTTTGCTATATGTAATGCTCCCT
CGATCATTACACTCTTTTAGCGCTTAAATTACTTTTAATTTCCAGTTACA
TCACCCTAATTATGTCGTGATTGCCAAAAAACTATAAATGTTAATGAAAT
AAAACATTGTTCATATAAAATATTTAGCATATGTACCTTTCACCAATTGT
CCAGTTGAAAAGTTTGTTTTGTTCTAAATCAAAAAAAAAAAAAA
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