FC871734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD1_DANRE (Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18 Identity = 49/111 (44.14%), Postives = 60/111 (54.05%), Query Frame = 3 Query: 216 QSKADGTVKKIRKPKP-WKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 Q K G + ++K KP WK P+T+ QL RDEFWDTAP + GRKEIWD IVD A + + LT CYDE G +Y+LP Y L+ P NLI E Sbjct: 20 QRKRGGRNEPLKKDKPKWKSDYPMTEGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYCLAPPVNLISE 130
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD1_XENTR (Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis GN=ubtd1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17 Identity = 48/111 (43.24%), Postives = 59/111 (53.15%), Query Frame = 3 Query: 216 QSKADGTVKKIRKPKP-WKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 Q K G + ++K +P WK P+T QL RDEFWDTAP + GRKEIWD IVD A + + LT CYDE G +Y+LP Y L+ P NLI E Sbjct: 23 QRKRAGRNEPLKKERPRWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAFAVEANDHELAQAIVDGASITLPHGSLTECYDELGTRYQLPVYCLAPPVNLIME 133
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD2_DANRE (Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16 Identity = 46/101 (45.54%), Postives = 54/101 (53.47%), Query Frame = 3 Query: 243 KIRKPKPWKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 K KPK WK P+T QL RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G +Y+LP Y LS P N+I E Sbjct: 33 KREKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAQAFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLSPPVNMIEE 132
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD2_MOUSE (Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 45/106 (42.45%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 231 GTVKKIRKPKP-WKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 G + ++K KP WK P+T QL RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G +Y+LP Y L+ P N+I E Sbjct: 27 GRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIEE 132
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD2_HUMAN (Ubiquitin domain-containing protein 2 OS=Homo sapiens GN=UBTD2 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 45/106 (42.45%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 231 GTVKKIRKPKP-WKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 G + ++K KP WK P+T QL RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G +Y+LP Y L+ P N+I E Sbjct: 27 GRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIEE 132
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD2_BOVIN (Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 45/106 (42.45%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 231 GTVKKIRKPKP-WKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 G + ++K KP WK P+T QL RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G +Y+LP Y L+ P N+I E Sbjct: 27 GRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIEE 132
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD1_XENLA (Ubiquitin domain-containing protein 1 OS=Xenopus laevis GN=ubtd1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 45/106 (42.45%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 231 GTVKKIRKPKP-WKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 G + ++K KP WK P+T QL RDEFWDTAP + GRKEIWD I+D A + + LT CYDE G +Y+LP Y L+ P N+I E Sbjct: 27 GRNQPLKKDKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLAPPINMIEE 132
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD1_RAT (Ubiquitin domain-containing protein 1 OS=Rattus norvegicus GN=Ubtd1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14 Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 3 Query: 222 KADGTVKKIRKPK-PWKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 K G + ++K + WK P+T QL RDEFWDTAP + GRKEIWD I+D A + + L CYDE G +Y+LP Y LS P NL+ E Sbjct: 21 KRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQLPIYCLSPPVNLLLE 129
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD1_MOUSE (Ubiquitin domain-containing protein 1 OS=Mus musculus GN=Ubtd1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14 Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 3 Query: 222 KADGTVKKIRKPK-PWKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 K G + ++K + WK P+T QL RDEFWDTAP + GRKEIWD I+D A + + L CYDE G +Y+LP Y LS P NL+ E Sbjct: 21 KRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQLPIYCLSPPVNLLLE 129
BLAST of FC871734 vs. ExPASy Swiss-Prot
Match: UBTD1_HUMAN (Ubiquitin domain-containing protein 1 OS=Homo sapiens GN=UBTD1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14 Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 3 Query: 222 KADGTVKKIRKPK-PWKHPQPITKSQLMQLRDEFWDTAPHYGGRKEIWD----XXXXXXXXXXXXXXXIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLIRE 533 K G + ++K + WK P+T QL RDEFWDTAP + GRKEIWD I+D A + + L CYDE G +Y+LP Y LS P NL+ E Sbjct: 21 KRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQLPIYCLSPPVNLLLE 129 The following BLAST results are available for this feature:
BLAST of FC871734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871734 ID=FC871734; Name=FC871734; organism=Citrus sinensis; type=EST; length=703bpback to top |