CV712873
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.080e-76 Identity = 137/226 (60.62%), Postives = 159/226 (70.35%), Query Frame = -1 Query: 46 KQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 723 K QDL N MG MY AV FLGV N SSVQPVV +ER+VFYRE+ AGMYS + YAF QV IEIPYIFVQ+ Y +IVYAMIGFEW K +GMM VA TPN ++ASIV+ FYG+WN+ SGFIIPR R+PVWWRW YWANP+AWTLYG ASQFGD+Q +L ETV+QFLR Y+GFKHDFLG + +FAF FA I+ NFQ+R Sbjct: 1209 KSQDLLNAMGSMYAAVLFLGVQNASSVQPVVAIERTVFYRERAAGMYSAIPYAFGQVSIEIPYIFVQSVFYGIIVYAMIGFEWDVGKFFWYLFIMFFTLLYFTFYGMMGVAVTPNQNVASIVAAFFYGVWNLFSGFIIPRPRMPVWWRWYYWANPVAWTLYGLVASQFGDIQTKLSDNETVEQFLRRYFGFKHDFLGVVAAVLTAYVFMFAFTFAFAIKAFNFQRR 1434
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.080e-76 Identity = 142/227 (62.56%), Postives = 163/227 (71.81%), Query Frame = -1 Query: 46 KQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRL-ESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 723 + QDL N MG MY AV FLGV N SSVQPVV +ER+VFYREK AGMYS + YAFAQVLIEIPYIFVQA Y LIVY+MIGFEWT AK FGMM VA TPN ++ASIV+ FY +WN+ SGFI+PR RIP+WWRW YW PIAWTLYG ASQFGD+QD L + +TV+QFLRS +GFKHDFLG + +FAF FALGI+ NFQ+R Sbjct: 1210 RNQDLVNAMGSMYAAVLFLGVQNSSSVQPVVSVERTVFYREKAAGMYSAIPYAFAQVLIEIPYIFVQATVYGLIVYSMIGFEWTVAKFFWDFFFMFFTFLYFTFFGMMTVAVTPNQNVASIVAGFFYTVWNLFSGFIVPRPRIPIWWRWYYWGCPIAWTLYGLVASQFGDLQDPLTDQNQTVEQFLRSNFGFKHDFLGVVAAVIVAFAVVFAFTFALGIKAFNFQRR 1436
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.947e-74 Identity = 132/226 (58.41%), Postives = 161/226 (71.24%), Query Frame = -1 Query: 46 QQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRL-ESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 720 +QDL N MG MY AV FLG+ N +SVQPVV++ER+VFYRE+ AGMYS M YAFAQV IEIPY+ VQA Y LIVYAMIGFEWTA K +GMM VA TPNHHIAS+VS+ FYG+WN+ SGF+IPR +PVWW W YW P+AWTLYG ASQFGD+ + + +S +VKQF+R +YG++ FLG + P LFA +FA+GI+ NFQKR Sbjct: 1198 RQDLSNAMGSMYTAVLFLGLQNAASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGDITEPMADSNMSVKQFIREFYGYREGFLGVVAAMNVIFPLLFAVIFAIGIKSFNFQKR 1423
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 9.042e-72 Identity = 129/226 (57.08%), Postives = 154/226 (68.14%), Query Frame = -1 Query: 46 KQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 723 K QDLFN MG MY AV F+GV+N +SVQPVV +ER+VFYRE+ AGMYS YAF QV+IEIPY VQA Y +IVYAMIGFEWTAAK +GMM V TPN+HIASIVS+ FY +WN+ SGF+IPR R+P+WWRW WA P+AWTLYG SQFGD++ +E G VK F+ +Y+GFKH +LG V LFA +F I NFQKR Sbjct: 1232 KSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPMEDGTPVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 9.042e-72 Identity = 129/226 (57.08%), Postives = 154/226 (68.14%), Query Frame = -1 Query: 46 KQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 723 K QDLFN MG MY AV F+GV+N +SVQPVV +ER+VFYRE+ AGMYS YAF QV+IEIPY VQA Y +IVYAMIGFEWTAAK +GMM V TPN+HIASIVS+ FY +WN+ SGF+IPR R+P+WWRW WA P+AWTLYG SQFGD++ +E G VK F+ +Y+GFKH +LG V LFA +F I NFQKR Sbjct: 1232 KSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPMEDGTPVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.014e-71 Identity = 128/227 (56.39%), Postives = 161/227 (70.93%), Query Frame = -1 Query: 46 KQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDV-QDRLESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 723 K+ DLFN++G MY AV F+G+ N +VQP+VD+ER+VFYREK AGMYS + YAFAQVLIEIP+IF+Q Y LIVY++IGF+WT K +GMM VA TPN IA+IVST FY +WNI +GF+IPR RIP+WWRW WA P+AWTLYG ASQ+GD+ LE GE V+ ++R Y+GF+HD+LG V +LFAFVFA I+V NFQ+R Sbjct: 1218 KRLDLFNSLGSMYAAVLFIGIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLIGFDWTVEKFFWYMFFMFFTFMYFTFYGMMAVAMTPNSDIAAIVSTAFYCIWNIFAGFLIPRPRIPIWWRWYSWACPVAWTLYGLVASQYGDITNSTLEDGEVVQDYIRRYFGFRHDYLGYVATAVVGFAALFAFVFAFSIKVFNFQRR 1444
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.885e-69 Identity = 124/226 (54.87%), Postives = 152/226 (67.26%), Query Frame = -1 Query: 46 KQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 723 K QDLFN MG MY AV F+GVLN SVQPVV +ER+VFYRE+ AGMYS YAF QV IE PY VQ+ Y +IVY+MIGF+WTAAK +GMM V TP++H+ASIVS+ FYG+WN+ SGFIIPR ++P+WWRW W P+AWTLYG ASQFGD+ ++ G VK F+ +Y+ FKH +LG + LFAF+F I LNFQKR Sbjct: 1239 KSQDLFNAMGSMYSAVLFIGVLNSQSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVAIEFPYTLVQSIIYGIIVYSMIGFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGLTPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFGDIMTPMDDGTPVKIFVENYFDFKHSWLGVVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1464
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.200e-69 Identity = 126/224 (56.25%), Postives = 154/224 (68.75%), Query Frame = -1 Query: 46 DLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRL-ESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 714 DL N MG MY AV F+G+ N +VQP+VD+ER+VFYREK AGMYS + YA+AQVLIE+P+I VQ Y L+VY+MIGF+WTAAK +GMM VA TPN IA+IV+ FY +WNI +GFIIPR RIP+WWRW YWA P+AWTLYG SQFG+ D + + ETVK FLR + GF+HDFL V V LFA +FA I+ LNFQ+R Sbjct: 1218 DLINAMGSMYAAVLFIGIQNAQTVQPIVDVERTVFYREKAAGMYSALPYAYAQVLIEVPHILVQTLLYGLLVYSMIGFDWTAAKFLWYMFFMFFTFLYFTYYGMMAVAMTPNSDIAAIVAAAFYAIWNIFAGFIIPRPRIPIWWRWYYWACPVAWTLYGLVVSQFGEYTDTMSDVDETVKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.265e-65 Identity = 122/227 (53.74%), Postives = 148/227 (65.20%), Query Frame = -1 Query: 46 KQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLESG-ETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 723 KQQDLFN MG MY AV ++GV N SVQPVV +ER+VFYRE+ AGMYS YAF QV IE+PYI VQ Y ++VY+MIGFEWT AK +GMM V TPN IA+I+S+ FY +WN+ SG++IPR +IPVWWRW W P+AWTLYG ASQFGD+Q LE TV QF+ Y+GF H+FL V FAF+F+ I NFQ+R Sbjct: 1224 KQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLEGDTRTVAQFVTDYFGFHHNFLWVVAVVHVVFAVTFAFLFSFAIMKFNFQRR 1450
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.680e-65 Identity = 117/226 (51.77%), Postives = 147/226 (65.04%), Query Frame = -1 Query: 46 KQQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 723 + QDLFN MG MY AV F+GVLN SVQPVV +ER+VFYRE+ AGMYS + YAF QV IE PY VQ+ YS+IVY+MIGF+WT AK +GMM V TP++H+ASIVS+ FY +WN+ +GF+I R PVWWRW W P+AWTLYG SQ+GD+ ++ G V F+ +Y+ FKH +LG + LFAF+F I LNFQKR Sbjct: 1243 QSQDLFNAMGSMYAAVLFIGVLNGQSVQPVVSVERTVFYRERAAGMYSALPYAFGQVAIEFPYTLVQSVIYSIIVYSMIGFQWTVAKFFWYLFFMFFTLLYFTFYGMMAVGLTPSYHVASIVSSAFYAIWNLFTGFVISRPATPVWWRWYCWICPVAWTLYGLIVSQYGDIVTPMDDGIPVNVFVENYFDFKHSWLGFVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1468 The following BLAST results are available for this feature:
BLAST of CV712873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712873 ID=CV712873; Name=CV712873; organism=Citrus sinensis; type=EST; length=723bpback to top |