CV712870

Overview
NameCV712870
Unique NameCV712870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60
Identity = 124/196 (63.27%), Postives = 140/196 (71.43%), Query Frame = 2
Query:  140 EALNPLFSSVSSAFPPNPSLRFSSPKNDNGV-VVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQ 724
            E L+P+ S+ S  F     L+  S K+ NG+ VVCASK +N  PLTGV+F PFEEVKKEL LVPTVPQ+SLARHK++D CEAA+NEQINVEYNVSYVYH M+AYFDRDNVALKGL                KLMEYQNKRGGKVKLQSILMPLSEFDHAE+GDALYAME                H VA +N+DVQ
Sbjct:   17 ENLSPMLSTSSQGFV----LKNFSTKSRNGLLVVCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQ 208          
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.079e-60
Identity = 124/191 (64.92%), Postives = 135/191 (70.68%), Query Frame = 2
Query:  152 PLFSSVSSAFPPNPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQ 724
            PL +S SS       +R+S     N +V CA+K+ NN PLTGV+F PFEEVKKELDLVPTVPQ SLAR K+TDDCEA INEQINVEYNVSYVYHAMFAYFDRDNVALKGL                KLMEYQNKRGGKVKLQSI+MPLSEFDH EKGDALYAME                H VA+KN+DVQ
Sbjct:   21 PLPNSSSSGI-----IRYSQSLGKN-LVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQ 205          
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.111e-53
Identity = 116/189 (61.38%), Postives = 130/189 (68.78%), Query Frame = 2
Query:  161 SSVSSAFPPNPSLRFSSPKNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQ 724
            +S  S F PN     S P    G+VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ E+A+NEQINVEYNVSYVYHAMFAYFDRDNVAL+GL                KLMEYQNKRGGKVKLQSI+MPLS+FDHA+KGDAL+AME                H VA KN DVQ
Sbjct:   10 ASSLSLFSPNAEPPRSVPAR--GLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQ 196          
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.111e-53
Identity = 115/196 (58.67%), Postives = 128/196 (65.31%), Query Frame = 2
Query:  134 QKEALNPLFSSVSSAFPPNPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDV 721
            Q E L+PLFSS  S           SPKN N  VV ASK  N+ PLTGV+F PFEE+KKEL LVP VP  SL R K++DDCEAAINEQINVEYN SYVYHAMFAYFDRDNVALKGL                KLME+QNKRGG+VKL SI  P +EFDH EKGDALYAME                H VA++++DV
Sbjct:   15 QGENLSPLFSSSKSF----------SPKNGNRFVVSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDV 200          
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.474e-53
Identity = 116/192 (60.42%), Postives = 131/192 (68.23%), Query Frame = 2
Query:  161 SSVSSAFPPNPSLRFSSP---KNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQ 724
            +S  S F PN     S P    N + +VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ EAA+NEQINVEYNVSYVYHA+FAYFDRDNVAL+GL                KLMEYQN+RGGKVKLQSI+MPLSEFDHA+KGDAL+AME                H VA KN DVQ
Sbjct:    8 ASSLSLFNPNAEPSRSVPVLANNASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQ 199          
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.401e-53
Identity = 112/196 (57.14%), Postives = 134/196 (68.37%), Query Frame = 2
Query:  137 KEALNPLFSSVSSAFPPNPSLRFSSPKNDNGVVVC-ASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDV 721
            K+ ++PL  S+SS      +LR SS K+ N      ASK++    L+GV+F PF+EVKKELDLVPT   LSLAR K++D+CEAAINEQINVEYNVSYVYHAM+AYFDRDN+ALKGL                KLMEYQNKRGG+VKLQSI+MPLSEF+H +KGDALY ME                H VA+KN+DV
Sbjct:   23 KKDVSPLLPSISS------NLRVSSGKSGNLTFSFRASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDV 212          
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.960e-50
Identity = 111/200 (55.50%), Postives = 134/200 (67.00%), Query Frame = 2
Query:  134 QKEALNPLFSSVSSAFPPNPSLRFSSPKNDN-GVVVCASKNANN--SPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQ 724
            +K+ ++PLFSS SS   P      SS K+ N    + ASK++    S L+GV+F PFEEVKKE+DLVP+  QLSLARH ++ +CEAA+NEQINVEYNVSYVYHA++AYFDRDNVALKGL                 LMEYQNKRGG+VKLQ +++P SEFDH EKGDALYAME                H VA+KN DVQ
Sbjct:   17 EKKDISPLFSSSSSISSP-----VSSGKSGNLSFPLRASKSSTTTTSTLSGVVFEPFEEVKKEMDLVPSGQQLSLARHLYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQ 211          
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.167e-49
Identity = 107/200 (53.50%), Postives = 125/200 (62.50%), Query Frame = 2
Query:  131 PQKEALNPLFSSVSSAFPP--NPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQ 724
            P    L+  ++   + FPP  N S    SP       V A+K  N   LTGV+F PFEEVKKE++LVPT P +SLARHKF+DD E+AIN+QINVEYNVSYVYHA++AYFDRDNV LKG                   MEYQNKRGG+VKLQSILMP+SEFDH EKGDAL+AME                  V  KN+DVQ
Sbjct:    7 PALSLLSSGYTGGGNLFPPSRNSSNLLFSPSGSR-FSVQAAKGTNTKSLTGVVFEPFEEVKKEMELVPTTPFVSLARHKFSDDSESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQ 205          
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.717e-46
Identity = 96/183 (52.46%), Postives = 115/183 (62.84%), Query Frame = 2
Query:  185 PNPSLRFSSPK---NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQ 724
            P P +R ++P+   + +    C +       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAA+NEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + +D Q
Sbjct:   24 PAPVVRVAAPRGVASPSAGAACRAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDKSLARHKFVDDCEAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQ 206          
BLAST of CV712870 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.899e-45
Identity = 94/175 (53.71%), Postives = 111/175 (63.43%), Query Frame = 2
Query:  200 RFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQ 724
            R ++ ++   +   A+       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAAINEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + +D Q
Sbjct:   29 RVTAQRSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQ 203          
The following BLAST results are available for this feature:
BLAST of CV712870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
FRI2_TOBAC1.600e-6063.27Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI3_SOYBN6.079e-6064.92Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI4_SOYBN1.111e-5361.38Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI1_TOBAC1.111e-5358.67Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_VIGUN2.474e-5360.42Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_ARATH9.401e-5357.14Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH1.960e-5055.50Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_ARATH2.167e-4953.50Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_MAIZE1.717e-4652.46Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI2_MAIZE1.899e-4553.71Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002A04_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712870 ID=CV712870; Name=CV712870; organism=Citrus sinensis; type=EST; length=726bp
GCAGCCACCGTTGCGTTTCACTTCATTTGCTCCTCTTTTCAAATCTTTTT
GTCCTTGAAATCCGTAAACAAAAACATTTGAAAAAAAAAAAATGTTGCTC
GAAGCATCTTCAGCTTTATCCCTCGTGAGCCCCCAAAAGGAGGCTCTAAA
TCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCGAACCCGAGTCTCC
GTTTTTCTTCACCGAAAAATGATAACGGCGTGGTGGTTTGCGCCTCTAAA
AATGCTAACAACAGCCCCTTAACCGGCGTCATTTTTGCTCCCTTTGAAGA
GGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCTCAACTGTCTCTTG
CCAGACACAAGTTCACTGACGATTGTGAGGCCGCAATCAACGAGCAGATC
AATGTGGAATACAATGTCTCCTATGTGTATCATGCCATGTTTGCTTACTT
TGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCAAGGAAT
CAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATATCAGAAC
AAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCTCTCTGA
GTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGCTTACGC
TGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCACAAGGTG
GCCAACAAGAACCATGATGTGCAGTT
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