CV712869

Overview
NameCV712869
Unique NameCV712869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.327e-63
Identity = 126/169 (74.56%), Postives = 132/169 (78.11%), Query Frame = -1
Query:  281 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGEEVVA 787
            DCEA INEQINVEYNVSYVYHAMFAYFDRDNVALKGL               EKLMEYQNKRGGKVKLQSI+MPLSEFDH EKGDALYAME               LH VA+KN+DVQLADF+ESE+L EQVEAIKKISEYVAQLRRVG+GHGVWHFDQMLLH E V A
Sbjct:   88 DCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVAA 256          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.389e-62
Identity = 124/168 (73.81%), Postives = 131/168 (77.98%), Query Frame = -1
Query:  281 CEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGEEVVA 784
            CEAA+NEQINVEYNVSYVYH M+AYFDRDNVALKGL               EKLMEYQNKRGGKVKLQSILMPLSEFDHAE+GDALYAME               LH VA +N+DVQLADFVES+YL EQVEAIK ISEYVAQLRRVG+GHGVWHFDQMLL  EEVVA
Sbjct:   92 CEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKGHGVWHFDQMLLQEEEVVA 259          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 4.542e-59
Identity = 117/163 (71.78%), Postives = 128/163 (78.53%), Query Frame = -1
Query:  299 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 787
            + E+A+NEQINVEYNVSYVYHAMFAYFDRDNVAL+GL               EKLMEYQNKRGGKVKLQSI+MPLS+FDHA+KGDAL+AME               LH VA KN DVQLADFVE+EYL EQVEAIK+ISEYVAQLRRVG+GHGVWHFDQMLLH
Sbjct:   79 ESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLH 241          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.322e-58
Identity = 116/163 (71.17%), Postives = 128/163 (78.53%), Query Frame = -1
Query:  299 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 787
            + EAA+NEQINVEYNVSYVYHA+FAYFDRDNVAL+GL               EKLMEYQN+RGGKVKLQSI+MPLSEFDHA+KGDAL+AME               LH VA KN DVQLADFVESE+L EQVE+IK+ISEYVAQLRRVG+GHGVWHFDQMLLH
Sbjct:   82 ESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLH 244          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.119e-57
Identity = 113/164 (68.90%), Postives = 126/164 (76.83%), Query Frame = -1
Query:  296 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHG 787
            +CEAAINEQINVEYNVSYVYHAM+AYFDRDN+ALKGL               EKLMEYQNKRGG+VKLQSI+MPLSEF+H +KGDALY ME               LH VA+KN+DV LADF+ESE+L EQVEAIK ISEYVAQLRRVG+GHG WHF+QMLL G
Sbjct:   96 ECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGHGTWHFNQMLLEG 259          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.864e-55
Identity = 108/162 (66.67%), Postives = 123/162 (75.93%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLL 787
            +CEAA+NEQINVEYNVSYVYHA++AYFDRDNVALKGL               E LMEYQNKRGG+VKLQ +++P SEFDH EKGDALYAME               LH VA+KN DVQLADF+ES +L+EQVEAIKKISEYV+QLRR+G+GHG WHFDQ LL
Sbjct:   94 ECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGHGTWHFDQELL 255          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.864e-55
Identity = 112/163 (68.71%), Postives = 123/163 (75.46%), Query Frame = -1
Query:  299 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 787
            DCEAAINEQINVEYN SYVYHAMFAYFDRDNVALKGL               EKLME+QNKRGG+VKL SI  P +EFDH EKGDALYAME               LH VA++++DV LADF+ESE+L EQV+AIKKISEYVAQLRRVGQGHGVW FDQMLL+
Sbjct:   84 DCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQGHGVWQFDQMLLN 246          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.512e-54
Identity = 110/165 (66.67%), Postives = 122/165 (73.94%), Query Frame = -1
Query:  293 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGE 787
            D E+AIN+QINVEYNVSYVYHA++AYFDRDNV LKG                E  MEYQNKRGG+VKLQSILMP+SEFDH EKGDAL+AME               L  V  KN+DVQL DFVESE+L EQVEAIKKISEYVAQLRR+G+GHGVWHFDQMLL+ E
Sbjct:   88 DSESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGHGVWHFDQMLLNDE 252          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.280e-53
Identity = 107/165 (64.85%), Postives = 120/165 (72.73%), Query Frame = -1
Query:  293 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGE 787
            DCEAA+NEQINVEYN SY YH++FAYFDRDNVALKG                EKLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME               LH VA + +D QL DF+ESE+L EQ EAI KIS+YVAQLRRVG+GHGVWHFDQMLL  E
Sbjct:   89 DCEAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKGHGVWHFDQMLLEEE 253          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.852e-53
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = -1
Query:  299 EAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 781
            EA INEQINVEYNVSYVYH+M+AYFDRDNVA+KGL               EK MEYQN+RGG+VKL  I+ P+SEF+HAEKGDALYAME               +HKVA++N+D QLADFVESE+L EQ+EAIKKIS+Y+ QLR +G+GHGVWHFDQMLL+
Sbjct:   95 EAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
The following BLAST results are available for this feature:
BLAST of CV712869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRI3_SOYBN2.327e-6374.56Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI2_TOBAC4.389e-6273.81Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI4_SOYBN4.542e-5971.78Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI2_VIGUN1.322e-5871.17Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_ARATH1.119e-5768.90Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH8.864e-5566.67Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_TOBAC8.864e-5568.71Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_ARATH1.512e-5466.67Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_MAIZE1.280e-5364.85Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI1_ARATH2.852e-5363.98Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002A04_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712869 ID=CV712869; Name=CV712869; organism=Citrus sinensis; type=EST; length=787bp
TTTTTTTTTTTTTTTTTAAAATCAAGCAACAATTATATATTATATAATTC
ACCCAAATTGCAAGATTGAACTTCAGAGGACTCCTACAGAGAAAGAAAGT
CAGATAAGCCTGATGTACCCCATATGCCATTCATCTATCAACACAATGTA
AAAGTTTCTGCACTAATTGCATGCCTGAAAGTTTCTAAATTAAGAACTAG
TGAACAAAAAAACAAAAACAACATAAAGATCAAGCCTTAGTAGGGATAGT
CAGGTGACAAGCAAGATGTGTCCACCATCATGCGACGACTTCCTCCCCAT
GGAGCAGCATTTGATCAAAGTGCCAGACACCATGCCCCTGGCCAACTCTT
CTCAGCTGAGCAACATATTCAGATATCTTTTTGATGGCTTCTACCTGCTC
ATGTAAATACTCGCTTTCAACGAAATCTGCCAACTGCACATCATGGTTCT
TGTTGGCCACCTTGTGCAAGTTGAGGAGTTTCTCATTTGTTAGCTTCTCC
AGAGACAGCGTAAGCTCCATGGCATACAAAGCATCTCCTTTCTCAGCATG
ATCAAACTCAGAGAGAGGCATCAATATTGATTGCAGCTTCACTTTACCTC
CTCGTTTGTTCTGATATTCCATCAATTTCTCAGCATGCTCTCTTTCCTCT
TCACTTGATTCCTTGAAAAACTTGGCGAGACCCTTGAGCGCGACATTGTC
TCTGTCAAAGTAAGCAAACATGGCATGATACACATAGGAGACATTGTATT
CCACATTGATCTGCTCGTTGATTGCGGCCTCACAATC
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