CV712854

Overview
NameCV712854
Unique NameCV712854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.342e-75
Identity = 136/176 (77.27%), Postives = 148/176 (84.09%), Query Frame = 2
Query:    2 MPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAKQ 529
            +PVY+SLLPIIGGCALAA+TELNFN+ GFMGAMISNLAFVFRNIF             NYYACLSMMSL+ILTPF+IAVE PQMWAAGWQ A++Q+GPNFVWWV AQS+FYHLYNQVSYMSLDQISPLTFSIGNTMKR          FHTP+QPVNALGAAIAI GTF+YSQAKQ
Sbjct:  213 LPVYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQAKQ 388          
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.063e-72
Identity = 133/173 (76.88%), Postives = 143/173 (82.66%), Query Frame = 2
Query:    8 VYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 526
            VY+SL+PIIGGCAL+A+TELNFNMIGFMGAMISNLAFVFRNIF             NYYACLSM+SLLILTPFAIAVEGPQMW  GWQ A+A +GP FVWWV AQS+FYHLYNQVSYMSLDQISPLTFS+GNTMKR          F TPVQPVNALGAAIAILGTF+YSQAK
Sbjct:  215 VYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVGPQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQAK 387          
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.109e-28
Identity = 66/177 (37.29%), Postives = 109/177 (61.58%), Query Frame = 2
Query:    8 VYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 526
            +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+I+             N YA +S++SLL   P AI +EGPQ+   G+  AIA++G     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +    A+G +IAI G  +YS  K
Sbjct:  224 LWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDST--NLYAYISIISLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTKFISDLFWVG---MFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIK 395          
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.042e-27
Identity = 66/177 (37.29%), Postives = 107/177 (60.45%), Query Frame = 2
Query:    8 VYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 526
            +++SL P++ G A+A++TEL+FN +GF+ AMISN++F +R+IF             N YA +S+++L +  P AI VEGPQ+   G+  AIA++G     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +     +G  IAI G  +YS  K
Sbjct:  223 LWLSLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIF--SKKAMTDMDSTNVYAYISIIALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLFWV---GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIK 394          
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.777e-27
Identity = 65/177 (36.72%), Postives = 108/177 (61.02%), Query Frame = 2
Query:    8 VYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 526
            +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+I+             N YA +S+++LL   P A+  EGPQ+   G+  AIA++G     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +    A+G +IAI G  IYS  K
Sbjct:  223 LWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDST--NLYAYISIIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVG---MFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIK 394          
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.321e-27
Identity = 65/177 (36.72%), Postives = 109/177 (61.58%), Query Frame = 2
Query:    8 VYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFV---WWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 526
            +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+++             N YA +S+++L +  P AI VEGPQ+   G+  AIA++G   F+   +WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +    A+G +IAI G  +YS  K
Sbjct:  220 LWLSLAPVVIGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKKAMTDMDST--NIYAYISIIALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWVG---MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIK 391          
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.960e-27
Identity = 65/176 (36.93%), Postives = 105/176 (59.66%), Query Frame = 2
Query:    2 MPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 526
            + +++SL P++ G ++A++TEL+FN +GF  AMISN++F +R+I+             N YA +S+++L+   P AI +EGPQ+   G+  AIA++G   FV  +    +FYHLYNQV+  +L++++PLT ++GN +KR          F   +     +G  IAI G  IYS  K
Sbjct:  228 LALWLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAMTDMDST--NVYAYISIIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIK 401          
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.152e-26
Identity = 62/177 (35.03%), Postives = 107/177 (60.45%), Query Frame = 2
Query:    8 VYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG----PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 526
            +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+I+             N YA +S+++L++  P A+ +EGP +   G+  AIA++G     + ++WV    +FYHLYNQV+  +L++++PLT ++GN +KR          F   +     +G  IAI G  +YS  K
Sbjct:  218 LWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDST--NIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVG---MFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIK 389          
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.965e-26
Identity = 61/174 (35.06%), Postives = 105/174 (60.34%), Query Frame = 2
Query:    8 VYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 526
            +++SL P++ G ++A++TEL+FN  GF+ AMISN++F +R+I+             N YA +S+++L++  P A+  EGP++   G+  AIA++G   FV  +    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +     +G +IAI G  +YS  K
Sbjct:  226 LWLSLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKKAMTDMDST--NVYAYISIIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIK 397          
BLAST of CV712854 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.322e-25
Identity = 64/173 (36.99%), Postives = 96/173 (55.49%), Query Frame = 2
Query:   17 SLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNY--YACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAKQ 529
            S++PI+GG ALA+VTE++FN  GF+ AM SNL    RN+              N   ++ +++MSL ++ P     EG +   +  Q A   +   +   + A ++ +H Y QVSYM L ++SP+T S+GN +KR          F TPV PVNA G  IA+ G F+YS+ K+
Sbjct:  223 SIIPIVGGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKVMVKKDDSLDNITLFSIITLMSLFLMAPVTFFSEGIKFTPSYIQSAGVNVQQIYTKSLIA-ALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYSRVKR 394          
The following BLAST results are available for this feature:
BLAST of CV712854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GPT2_ARATH1.342e-7577.27Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH1.063e-7276.88Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_FLAPR6.109e-2837.29Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB1.042e-2737.29Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR1.777e-2736.72Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL2.321e-2736.72Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU3.960e-2736.93Triose phosphate/phosphate translocator, chloropla... [more]
TPT_PEA1.152e-2635.03Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE1.965e-2635.06Triose phosphate/phosphate translocator, chloropla... [more]
TPT2_BRAOB6.322e-2536.99Triose phosphate/phosphate translocator, non-green... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001P20_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001P20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712854 ID=CV712854; Name=CV712854; organism=Citrus sinensis; type=EST; length=625bp
CATGCCGGTTTATATGTCACTCCTGCCGATTATTGGAGGCTGTGCCCTTG
CTGCTGTTACAGAGCTCAACTTCAACATGATTGGATTTATGGGAGCTATG
ATATCGAATTTGGCATTCGTGTTTCGGAACATTTTCTCCAAGAAAGGGAT
GAAGGGAAAGTCTGTTGGTGGGATGAACTATTATGCTTGTTTGTCTATGA
TGTCTCTTTTGATTCTCACACCATTTGCAATTGCTGTGGAGGGCCCTCAG
ATGTGGGCTGCTGGCTGGCAAAAGGCTATTGCTCAAATTGGTCCCAACTT
CGTGTGGTGGGTAGCGGCACAGAGTATCTTCTATCACTTGTACAACCAAG
TTTCATACATGTCTCTCGATCAAATTTCTCCATTGACATTCAGCATTGGC
AACACAATGAAGCGAATCTCTGTCATAGTCTCCTCCATCATCATCTTCCA
CACGCCAGTTCAACCCGTCAATGCTCTTGGAGCCGCCATTGCAATACTCG
GCACCTTCATCTATTCACAGGCAAAGCAGTGAAGGATTTTGAGGTGGTTT
TGCCGCATAGTCTATGAGTTCTGCTGGAACTATTCGCATCGAAGTCTGAC
AGAAGATTGATTAAAAAAAAAAAAA
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