CV712816

Overview
NameCV712816
Unique NameCV712816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13654 contig Csv1_Contig13654:223..971. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: M2OM_NEUCR (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa GN=NCU10732 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.631e-58
Identity = 126/259 (48.65%), Postives = 159/259 (61.39%), Query Frame = 1
Query:    1 PIDMIKVRIQL-GQGSAGT-------VTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNK--AIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            PIDMIKVRIQL G+G AG        VT+ ++ +      Y GLSAGLLRQA YTTAR+G F    ++  A     G+ +   ++A  GL AG + A +G+PADLALIRMQ+D   P A+R+NY +   AL  I  +EGV ALW GA PTVVRAMALN G LA + ++    +     S     + AS ++GFFAS  SLPFD+VKT++QK      GK PY G +DC  K  K  G F+FY GF  Y VRIAPH M+T
Sbjct:   61 PIDMIKVRIQLAGEGKAGGPKPTPLGVTRDIIASGKAMDLYTGLSAGLLRQAVYTTARIGCFDTFMSRLSARAKEKGQSVGFKERASAGLAAGGLAAMIGNPADLALIRMQSDGLKPVAERKNYKSVIDALGGIARNEGVAALWAGAAPTVVRAMALNFGQLAFFSEAKAQLKARTQWSSKVQTLSASAIAGFFASFFSLPFDFVKTRLQKQTRGPDGKLPYNGMVDCFAKVAKQEGVFRFYRGFGTYYVRIAPHAMVT 319          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.226e-52
Identity = 114/263 (43.35%), Postives = 157/263 (59.70%), Query Frame = 1
Query:    1 PIDMIKVRIQL-GQGSAGTVTKTMLK-------NEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVE------FFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            PID +KVR+QL G+G+     +  LK        EGF   YKGLSA LLRQATYTT R G + ++  K I A D KPLP  QK + G+ +GA GA VG+PADL ++RMQAD  LP   RRNY N F  ++RI  +EG+++LWKG  P ++RAM +  G ++SYDQ+ +      +F D     ++ T + AST + F A+  + P D +KT+I        G+  Y G+ DC  KTL+A G   FY GF  Y +R+ P  ++T
Sbjct:   44 PIDSLKVRMQLQGEGTGVGPKRGALKMLVHINQTEGFFTLYKGLSASLLRQATYTTTRFGLYDLI--KDIVAKDDKPLPFTQKIMVGMLSGAGGAIVGTPADLTMVRMQADGKLPFNLRRNYKNVFDGIFRISKEEGIISLWKGCSPNLIRAMFMTAGQVSSYDQTKQLMLASGYFHD-----DIKTHLIASTTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQYKGTFDCLSKTLRAEGFKAFYKGFNPYFMRLGPQTILT 299          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 1.885e-51
Identity = 119/258 (46.12%), Postives = 155/258 (60.08%), Query Frame = 1
Query:    1 PIDMIKVRIQL-GQGSAGTVTKT-------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P+D++K R+QL G+G+     KT       +LK EG    Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KAL G+TAGA GA VG+PA++ALIRM AD  LPA QRR Y N F AL RI  +EGV  LW+G  PT+ RA+ +N   LASY QS +F  D+   S+ +     AS +SG   +A S+P D VKT+IQ M+    GK  Y   +D  +K ++  G F  + GF  Y  R+ PH ++T
Sbjct:   41 PLDLVKNRMQLSGEGAKTREYKTSFHALTSILKTEGLKGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALVRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRM-IDGKPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLT 296          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 5.483e-51
Identity = 118/258 (45.74%), Postives = 154/258 (59.69%), Query Frame = 1
Query:    1 PIDMIKVRIQL-GQGSAGTVTKT-------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P+D++K R+QL G+G+     KT       +LK EG    Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KA+ G+TAGA GA VG+PA++ALIRM AD  LPA QRR Y N F AL RI  +EGVL LW+G  PT+ RA+ +N   LASY QS +F  D+   S+ +     AS +SG   +A S+P D  KT+IQ M+    GK  Y   +D   K ++  G F  + GF  Y  R+ PH ++T
Sbjct:   41 PLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRM-IDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLT 296          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 7.162e-51
Identity = 117/258 (45.35%), Postives = 156/258 (60.47%), Query Frame = 1
Query:    1 PIDMIKVRIQL-GQGSAGTVTKT-------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P+D++K R+QL G+G+     KT       +L+ EG    Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KA+ G+TAGA GA VG+PA++ALIRM AD  LP  QRR Y N F AL+RIV +EGV  LW+G  PT+ RA+ +N   LASY QS +F  D+   S+ +     AS +SG   +A S+P D VKT+IQ M+    GK  Y   +D  +K ++  G F  + GF  Y  R+ PH ++T
Sbjct:   41 PLDLVKNRMQLSGEGAKTREYKTSFHALISILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPVDQRRGYKNVFNALFRIVQEEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRM-IDGKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLT 296          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: M2OM_RAT (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus GN=Slc25a11 PE=2 SV=3)

HSP 1 Score: 193.356 bits (490), Expect = 1.143e-48
Identity = 116/258 (44.96%), Postives = 151/258 (58.53%), Query Frame = 1
Query:    1 PIDMIKVRIQL-GQGSAGTVTKT-------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P+D++  R+QL G+G+     KT       +LK EG    Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KAL G+TAGA GA VG PA++ALIRM AD  LPA QRR Y N F AL RI  +EGV  LW+G  PT+ RA+ +N   LASY QS +F  D+   S+ +     A  +SG   +A S+P D VKT+IQ M+     K  Y   +D  +K ++  G F  + GF  Y  R+ PH ++T
Sbjct:   41 PLDLVXNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKALIGMTAGATGAFVGPPAEVALIRMTADGRLPADQRRGYKNVFNALIRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCAIMISGLVTTAASMPVDIVKTRIQNMRM-IDEKPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLT 296          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.227e-34
Identity = 98/259 (37.84%), Postives = 135/259 (52.12%), Query Frame = 1
Query:    1 PIDMIKVRIQL-GQG----SAGTVTKTM--LKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRD--ACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQG-KYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P+D++K R Q+ G+G    S G V  T+  +KNEG  A YKGL+  LLR+ATY+T R+G + ++ N  I++N GK   L  K   G  +GA+GA + SP DL  +RMQA     +++   Y +   A   I+A EG+  LWKG GPT  RA  L    + SYD       D     +  L   I +S  +G  AS  + P D VKT+I     D+ G    Y  S DC  KT ++ G    Y GF     RI PH ++T
Sbjct:   27 PVDVLKTRFQIHGEGIDSKSLGLVNGTIKIIKNEGISAMYKGLTPSLLREATYSTLRMGGYDVIKNYFIDSN-GK-TNLLSKVTSGALSGALGACITSPTDLIKVRMQA-----SSKGVKYDSISSAFKEIIAKEGIKGLWKGVGPTTQRAALLTASQIPSYDHIKHMILDHGIIQVDGLQVHIVSSIFAGLIASITTSPVDLVKTRIMNQPFDSNGVGLIYKSSYDCFKKTFQSEGISGLYKGFLPNWFRIGPHTIVT 278          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.734e-34
Identity = 89/253 (35.18%), Postives = 132/253 (52.17%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTMLK---NEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P+D++KV +Q  Q     +T   L+    +G  A Y GLSA L RQ TY+  R   +  + ++  + + G PLP ++K L G  +G  G  VG+PADL  +RMQ D  LP  QRRNY +A   LYR+  +EG+  L+ GA     R   + +G L+ YDQ+ +       LS+ + T   AS ++G  A+    P D +KT++         K  Y G   CA++T K  GP  FY G     +R+ PH ++T
Sbjct:   26 PLDLLKVHLQTQQEVKLRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQG-PLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLM------NSKGEYQGVFHCAVETAKL-GPLAFYKGLVPAGIRLIPHTVLT 270          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: DIC_MOUSE (Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.734e-33
Identity = 91/256 (35.55%), Postives = 130/256 (50.78%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTML---KNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIGASTVSGFFASACSL----PFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P+D++KV +Q  Q     +T   L   + +GF A Y GLSA L RQ TY+  R   +  + +   + + G PLP Y K L G  +G  G  VG+PADL  +RMQ D  LP +QRRNY++A   LYR+  +E +  L+ GA     R   + +G L+ YDQ+ +       LS+    I    VS F A  C+     P D +KT++         K  Y G   CAM+T K  GP  F+ G     +R+ PH ++T
Sbjct:   25 PLDLLKVHLQTQQEVKLRMTGMALQVVRTDGFLALYNGLSASLCRQMTYSLTRFAIYETMRDYMTKDSQG-PLPFYNKVLLGGISGLTGGFVGTPADLVNVRMQNDMKLPPSQRRNYSHALDGLYRVAREESLRKLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSD---NIFTHFVSSFIAGGCATFLCQPLDVLKTRLM------NSKGEYQGVFHCAMETAKL-GPQAFFKGLFPAGIRLIPHTVLT 269          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: DIC1_CANGA (Mitochondrial dicarboxylate transporter OS=Candida glabrata GN=DIC1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.607e-26
Identity = 81/254 (31.89%), Postives = 125/254 (49.21%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVT---KTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALW-KGAGPTVVRAMALNMGMLASYDQSVEFFRDACGL--SELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMM 744
            P+D+ KVR+Q       T+    +++LKNEG    Y GLSA LLRQ TYTTAR G +  L    I  +  K   ++      + +GA+G   G+ ADL  IRMQ D+ LP  +RRNY NA   + +I   EG  +L+  G  P +VR + +    + +YD    F      +   +  T + +S ++GF A+    P D +KT +  M    +  + +  S    M+ +   GP   + G+     R+AP  M+
Sbjct:   26 PLDLTKVRLQAAPIPKPTIVQMLRSILKNEGIVGLYAGLSASLLRQCTYTTARFGMYDALKEHVIPRD--KLTNMWYLLGASMVSGALGGLAGNFADLINIRMQNDSALPLDKRRNYKNAIDGMVKIYKAEGAKSLFLTGWKPNMVRGVLMTASQVVTYDMFKNFLVTKYNMDPKKNSTHLTSSLLAGFVATTVCSPADVIKTIV--MNAHKKPGHNHDSSFKILMEAINKEGPSFMFRGWVPSFTRLAPFTML 275          
The following BLAST results are available for this feature:
BLAST of CV712816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
M2OM_NEUCR4.631e-5848.65Putative mitochondrial 2-oxoglutarate/malate carri... [more]
M2OM_DICDI2.226e-5243.35Probable mitochondrial 2-oxoglutarate/malate carri... [more]
M2OM_MOUSE1.885e-5146.12Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_HUMAN5.483e-5145.74Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_BOVIN7.162e-5145.35Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_RAT1.143e-4844.96Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
UCPB_DICDI1.227e-3437.84Mitochondrial substrate carrier family protein ucp... [more]
DIC_HUMAN2.734e-3435.18Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
DIC_MOUSE6.734e-3335.55Mitochondrial dicarboxylate carrier OS=Mus musculu... [more]
DIC1_CANGA1.607e-2631.89Mitochondrial dicarboxylate transporter OS=Candida... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001O23_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712816 ID=CV712816; Name=CV712816; organism=Citrus sinensis; type=EST; length=749bp
CCCATCGATATGATCAAGGTGAGAATTCAGCTGGGCCAGGGATCCGCCGG
TACTGTGACAAAGACTATGCTTAAGAATGAGGGTTTTGGTGCCTTTTACA
AGGGGTTGTCTGCTGGACTGCTCAGGCAAGCTACATATACTACTGCTCGT
CTTGGATCATTTAGGATCTTGACAAACAAAGCAATTGAAGCCAATGACGG
GAAGCCTCTTCCATTGTATCAGAAAGCCTTGTGTGGGCTAACTGCTGGTG
CTATTGGAGCTTCTGTTGGTAGTCCAGCAGATTTGGCACTTATCCGTATG
CAGGCTGATGCCACACTACCTGCTGCTCAACGCCGCAATTACACTAATGC
CTTCCAAGCTCTTTATCGTATTGTTGCAGATGAAGGGGTCTTAGCACTTT
GGAAAGGTGCAGGTCCTACTGTTGTGAGAGCTATGGCATTGAACATGGGC
ATGCTTGCCTCCTACGATCAAAGTGTTGAGTTTTTCAGAGATGCGTGTGG
CTTGTCTGAACTTCCTACAGTAATCGGGGCGAGTACAGTGTCAGGGTTCT
TTGCTTCAGCTTGCAGTTTACCCTTTGATTATGTCAAAACACAAATTCAG
AAAATGCAACCAGATGCTCAAGGAAAGTATCCATACACAGGCTCTATGGA
CTGTGCCATGAAAACCCTCAAGGCTGGTGGACCATTCAAATTTTACACTG
GTTTCCCTGTGTACTGTGTTCGGATTGCTCCTCATGTCATGATGACTTG
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