CV712757

Overview
NameCV712757
Unique NameCV712757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712757 vs. ExPASy Swiss-Prot
Match: ARI2_ARATH (Probable E3 ubiquitin-protein ligase ARI2 OS=Arabidopsis thaliana GN=ARI2 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.943e-55
Identity = 106/241 (43.98%), Postives = 149/241 (61.83%), Query Frame = -2
Query:   89 PCPKCCKPIEKNGGCNMVRCKCGITFNWISGLEYSNGYI-------------EVSEKRPEHGKWRLESYYHCHKLYKAHTESFRLEYEMKEDIQDKIKILGEKDTSSKDFGWIKDGLNKLFRARRILSFSYPFAFYMFADDLLKNEMTREERKIKXXXXXXXXXXXETNIERLSLILEENFEKYSEHQLKDFRMRVITQSVTADYLCRNLYEWIEADLLGSLKHSVHKIAPFNSAAVEKAS 772
            PCPKC KP+EKNGGCN+V C C  +F W+ G      +              E  EK+ E  K  L+ Y H H  YKAH +S +LE ++  +I  K+ I  +++   KDF W  +GL++LFR+RR+LS+SYPFAFYMF D+L K+EM+ EER+IK           E N+E+LS  LEE F+++++ ++   R++VI  SV  D LC N+YE IE DLLGSL+  +H I P+ S  +E+AS
Sbjct:  283 PCPKCHKPVEKNGGCNLVTCLCRQSFCWLCGEATGRDHTWARISGHSCGRFQEDKEKQMERAKRDLKRYMHYHNRYKAHIDSSKLEAKLSNNISKKVSISEKRELQLKDFSWATNGLHRLFRSRRVLSYSYPFAFYMFGDELFKDEMSSEEREIKQNLFEDQQQQLEANVEKLSKFLEEPFDQFADDKVMQIRIQVINLSVAVDTLCENMYECIENDLLGSLQLGIHNITPYRSNGIERAS 523          
BLAST of CV712757 vs. ExPASy Swiss-Prot
Match: ARI1_ARATH (Probable E3 ubiquitin-protein ligase ARI1 OS=Arabidopsis thaliana GN=ARI1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.254e-54
Identity = 104/241 (43.15%), Postives = 155/241 (64.32%), Query Frame = -2
Query:   86 CPKCCKPIEKNGGCNMVRCKCGITFNWISG------------LEYSNG-YIEVSEKRPEHGKWRLESYYHCHKLYKAHTESFRLEYEMKEDIQDKIKILGEKDTSSKDFGWIKDGLNKLFRARRILSFSYPFAFYMFADDLLKNEMTREERKIKXXXXXXXXXXXETNIERLSLILEENFEKYSEHQLKDFRMRVITQSVTADYLCRNLYEWIEADLLGSLKHSVHKIAPFNSAAVEKASK 769
            CPKC KP+EKNGGCN+VRC CG  F W+ G              +S G Y +  EK+ E  K  L  Y H H  YKAHT+S +LE ++++ I +K+    +++   KDF W+ +GL++LFR+RR+LS+SY FA+YMF +++ K+EMT EER+IK           E+N+E+LS  LEE F+++S  ++   R+++I  SV  D LC+ +YE IE DLLGSL+  +H I+P+ S  +E+A++
Sbjct:  283 CPKCYKPVEKNGGCNLVRCICGQCFCWLCGGATGSDHTYRSIAGHSCGRYQDDKEKQMERAKRDLNRYTHYHHRYKAHTDSSKLEDKLRDTIHEKVSKSEKRELKLKDFSWVTNGLDRLFRSRRVLSYSYAFAYYMFGEEMFKDEMTPEEREIKKNLFEDQQQQLESNVEKLSQFLEEPFDEFSNDKVMAIRIQIINLSVAVDTLCKKMYECIENDLLGSLQLGIHNISPYRSKGIEQAAQ 523          
BLAST of CV712757 vs. ExPASy Swiss-Prot
Match: ARI4_ARATH (Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana GN=ARI4 PE=5 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.606e-45
Identity = 97/243 (39.92%), Postives = 138/243 (56.79%), Query Frame = -2
Query:   86 CPKCCKPIEKNGGCNMVRCKCGITFNWISGL------EYSN-------GYIEVSEKRPEHGKWRLESYYHCHKLYKAHTESFRLEYEMKEDIQDKIKILGEKDTSS--KDFGWIKDGLNKLFRARRILSFSYPFAFYMFADDLLKNEMTREERKIKXXXXXXXXXXXETNIERLSLILEENFEKYSEHQLKDFRMRVITQSVTADYLCRNLYEWIEADLLGSLKHSVHKIAPFNSAAVEKASK 769
            CPKC KPI+K  GCN + CKCG  F W+ G        YS+        Y E   ++ E  +  L+ Y H H  YKAH +S +LE ++K+ I  K  +  E       K++ WI D +N+LFR+RRILS+SYPF FYMF  +L K++M+ EER IK           E N+ERLS ILEE F++Y   ++ +    +   +   D LC+ +YE IE +LLG L   +H IAP+ S  +E+A++
Sbjct:  277 CPKCSKPIQKRDGCNHMTCKCGQHFCWLCGQATGRDHSYSSIAGHSCGRYKEEKVRQLERAQRDLDRYTHYHYRYKAHIDSLKLEDKLKKSILKKAVLNSETKDQKVFKEYSWIIDAVNRLFRSRRILSYSYPFVFYMFGKELFKDDMSDEERNIKKNLFEDQQQQLEGNVERLSKILEEPFDEYDHEKVVEMMRHLTNLTAVVDNLCKEMYECIENELLGPLISGIHNIAPYRSKGIEQAAE 519          
BLAST of CV712757 vs. ExPASy Swiss-Prot
Match: ARI3_ARATH (Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana GN=ARI3 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.584e-43
Identity = 90/243 (37.04%), Postives = 137/243 (56.38%), Query Frame = -2
Query:   86 CPKCCKPIEKNGGCNMVRCKCGITFNWISGLEYSNGYIEVSEKRPEHGKWR-------------LESYYHCHKLYKAHTESFRLEYEMKEDIQDKIKILGEKDTSS--KDFGWIKDGLNKLFRARRILSFSYPFAFYMFADDLLKNEMTREERKIKXXXXXXXXXXXETNIERLSLILEENFEKYSEHQLKDFRMRVITQSVTADYLCRNLYEWIEADLLGSLKHSVHKIAPFNSAAVEKASK 769
            CPKC KPI+K  GCN++ CKCG  F W+ G      +   S      G+++             L+ Y H H  YKAH +S +LE ++++ I +K     E       K++ W+ D +N+LF +RRILS SYPFAFYMF ++L K+EM+ +ER+IK           E N+E+LS ILEE F++Y   ++ +    +   +   D LC+ +YE IE +LLG ++   H IAP+ S  +E+A++
Sbjct:  281 CPKCSKPIQKRDGCNLMTCKCGQHFCWLCGQATGRDHTYTSIAGHSCGRYKDEKVRQLERAQRDLDRYTHYHYRYKAHIDSLKLEDKLRKSILEKAVSNSETKDQKVFKEYSWVTDAVNRLFISRRILSQSYPFAFYMFGEELFKDEMSEKEREIKKNLFEDQQQQLEGNVEKLSKILEEPFDEYDHEKVVEMMRHLTNLTAVVDNLCKEMYECIENELLGPIQFGNHNIAPYRSKGIEQATE 523          
BLAST of CV712757 vs. ExPASy Swiss-Prot
Match: AKIB1_DANRE (Ankyrin repeat and IBR domain-containing protein 1 OS=Danio rerio GN=ankib1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.108e-13
Identity = 47/153 (30.72%), Postives = 78/153 (50.98%), Query Frame = -2
Query:  401 PCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLEY------SNGYI-----EVSEKRPEHGK-------------WRLESYYHCHKLYKAHTESFRLEYEMKEDIQDKIKILGE----KDTSSKDFGWIKDGLNKLFRARRILSFSYPFAFYM 772
            PC  C  PI+KN GCN ++C KC   F WI   E+      + GY      EV ++  E  K               L+ + H +  YK H  S++LE  + +  ++K++ L +    +D +  D  +I+DG+++L + RRIL  SYP++F++
Sbjct:  517 PCANCKSPIQKNEGCNHMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEMTVEAEKKHKSFQELDRFMHYYTRYKNHEHSYQLEERLLKTAKEKMEQLSKAFIGRDGAPPDTTFIEDGVHELLKTRRILKCSYPYSFFL 669          
BLAST of CV712757 vs. ExPASy Swiss-Prot
Match: AKIB1_MOUSE (Ankyrin repeat and IBR domain-containing protein 1 OS=Mus musculus GN=Ankib1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11
Identity = 45/153 (29.41%), Postives = 73/153 (47.71%), Query Frame = -2
Query:  401 PCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLEY------SNGYIEVS-----------------EKRPEHGKWR-LESYYHCHKLYKAHTESFRLEYEM----KEDIQDKIKILGEKDTSSKDFGWIKDGLNKLFRARRILSFSYPFAFYM 772
            PC  C  PI+KN GCN ++C KC   F WI   E+      + GY   +                 E   +H +++ L+ + H +  YK H  S++LE  +    KE ++   + L E +    D  +I+D ++ L + RRIL  SYP+ F++
Sbjct:  519 PCANCKSPIQKNEGCNHMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMHYYTRYKNHEHSYQLEQRLLKTAKEKMEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRILKCSYPYGFFL 671          
BLAST of CV712757 vs. ExPASy Swiss-Prot
Match: AKIB1_HUMAN (Ankyrin repeat and IBR domain-containing protein 1 OS=Homo sapiens GN=ANKIB1 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.406e-11
Identity = 44/153 (28.76%), Postives = 73/153 (47.71%), Query Frame = -2
Query:  401 PCPKCCKPIEKNGGCNMVRC-KCGITFNWISGLEY------SNGYIEVS-----------------EKRPEHGKWR-LESYYHCHKLYKAHTESFRLEYEM----KEDIQDKIKILGEKDTSSKDFGWIKDGLNKLFRARRILSFSYPFAFYM 772
            PC  C  PI+KN GCN ++C KC   F WI   E+      + GY   +                 E   +H +++ L+ + H +  +K H  S++LE  +    KE ++   + L E +    D  +I+D ++ L + RRIL  SYP+ F++
Sbjct:  518 PCANCKSPIQKNEGCNHMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMHYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRILKCSYPYGFFL 670          
BLAST of CV712757 vs. ExPASy Swiss-Prot
Match: YKX2_SCHPO (Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces pombe GN=SPAC328.02 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 41/138 (29.71%), Postives = 71/138 (51.45%), Query Frame = -2
Query:  401 CPKCCKPIEKNGGCNMVRC-KCGITFNWI---SGLEYSNGYI--------EVSEKRPEHGKWR--LESYYHCHKLYKAHTESFRLEYEMKEDIQDKI-KILGEKDTSSKDFGWIKDGLNKLFRARRILSFSYPFAFYM 769
            CPKC   IEKNGGCN + C KC   F W+      E+ N +           +  R    K R  LE Y H +  +  H +S +L++E+ E    ++ ++  + + S  +  ++K+ ++ LF+ R+ L ++Y FA+Y+
Sbjct:  291 CPKCSTTIEKNGGCNHMTCKKCKYEFCWVCLGPWTEHGNNWYTCNRYEEKSSTSARDSQSKSRASLERYLHYYNRFANHEQSAKLDHELYEHTHKRMTQMQVDSNLSWVEVQFLKNAVDILFQCRQTLKWTYAFAYYL 428          
The following BLAST results are available for this feature:
BLAST of CV712757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
ARI2_ARATH2.943e-5543.98Probable E3 ubiquitin-protein ligase ARI2 OS=Arabi... [more]
ARI1_ARATH3.254e-5443.15Probable E3 ubiquitin-protein ligase ARI1 OS=Arabi... [more]
ARI4_ARATH3.606e-4539.92Putative E3 ubiquitin-protein ligase ARI4 OS=Arabi... [more]
ARI3_ARATH2.584e-4337.04Probable E3 ubiquitin-protein ligase ARI3 OS=Arabi... [more]
AKIB1_DANRE8.108e-1330.72Ankyrin repeat and IBR domain-containing protein 1... [more]
AKIB1_MOUSE1.171e-1129.41Ankyrin repeat and IBR domain-containing protein 1... [more]
AKIB1_HUMAN3.406e-1128.76Ankyrin repeat and IBR domain-containing protein 1... [more]
YKX2_SCHPO9.911e-1129.71Uncharacterized RING finger protein C328.02 OS=Sch... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N17_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712757 ID=CV712757; Name=CV712757; organism=Citrus sinensis; type=EST; length=773bp
AAAATGGATTCCCGTTCTCCTTTGTCCCCAAATAGGTTTGTGTGTGTAGA
GCTTTTTTATTATCTAAGTGTCAACAATAAGGAATTTTTGAAGCTTTCTC
TACAGCTGCTGAGTTGAAAGGAGCTATTTTATGAACCGAATGCTTGAGAG
AACCCAGTAGATCCGCTTCAATCCATTCGTACAAATTCCGGCAGAGATAA
TCAGCGGTGACTGATTGAGTAATGACCCTCATTCTGAAATCCTTAAGTTG
GTGCTCGGAATATTTCTCAAAATTTTCTTCTAAAATCAATGAAAGCCTCT
CAATGTTGGTCTCAAACTGCTGCTGTTGGTCCTCAAAAAAGTTTTGCTTT
ATTTTCCTTTCCTCTCTTGTCATCTCATTTTTCAACAGGTCATCGGCAAA
CATGTAAAATGCAAATGGGTACGAAAATGAAAGGATCCGCCTTGCTCTAA
AGAGCTTATTCAGTCCATCCTTTATCCAGCCAAAGTCCTTGGATGATGTG
TCCTTTTCACCCAGTATTTTTATTTTATCCTGTATGTCTTCCTTCATCTC
ATACTCAAGCCTAAAAGATTCTGTATGAGCTTTGTACAGTTTGTGGCAGT
GATAATAGCTTTCAAGCCTCCACTTCCCATGCTCAGGTCTCTTTTCCGAA
ACTTCTATATATCCGTTTGAATATTCCAAACCGGAAATCCAATTGAATGT
GATCCCACACTTGCAGCGCACCATGTTGCAACCCCCATTCTTTTCAATTG
GCTTGCAACATTTTGGGCAAGGT
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