CX043355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 9.198e-83 Identity = 149/171 (87.13%), Postives = 162/171 (94.74%), Query Frame = -2 Query: 233 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 745 MLGSWNKN GGKH+GS+L QRV INEIAES+MAFNTNYKDTGLFGVYAVAK DCLDDL+YAIMYE TKLAYRVS+ADVTRARNQLKSSLLLH+DGTSP+AEDIGRQLLTYGRRIP AELFARID+VDASTVKRVAN++IYD+DIAI+A+GPIQ LPDYN FRRRTYWNRY Sbjct: 361 MLGSWNKNVGGGKHVGSDLTQRVAINEIAESIMAFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAYRVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKFRRRTYWNRY 531
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.659e-39 Identity = 76/170 (44.71%), Postives = 117/170 (68.82%), Query Frame = -2 Query: 236 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 745 ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V + + D+ + + E +L V+E++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA TV+RV ++I+D+ AIAA+GPI+ LPD+N W R Sbjct: 319 LIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHVVQNEWKRLCTDVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSPAIAALGPIERLPDFNQICSNMRWIR 488
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: MPPB_PONAB (Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.779e-39 Identity = 75/170 (44.12%), Postives = 116/170 (68.24%), Query Frame = -2 Query: 236 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 745 ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V +P + D+ + + E +L V+E++V RARN LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A T++ V ++IY+R AIAA+GPI+ LPD+ W R Sbjct: 319 LIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEPSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIEQLPDFKQICSNMCWLR 488
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: MPPB_RAT (Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 6.242e-39 Identity = 76/170 (44.71%), Postives = 115/170 (67.65%), Query Frame = -2 Query: 236 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 745 ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V + + D+ +A+ E +L VSE++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA V+ V ++IY + AIAA+GPI+ LPD+N W R Sbjct: 319 LIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHAVQKEWMRLCTAVSESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSPAIAALGPIERLPDFNQICSNMRWTR 488
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: MPPB_HUMAN (Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 6.242e-39 Identity = 75/170 (44.12%), Postives = 116/170 (68.24%), Query Frame = -2 Query: 236 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 745 ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V + + D+ + + E +L V+E++V RARN LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A T++ V ++IY+R AIAA+GPI+ LPD+ R W R Sbjct: 319 LIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLPDFKQIRSNMCWLR 488
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: MPPB_BOVIN (Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.391e-38 Identity = 72/168 (42.86%), Postives = 115/168 (68.45%), Query Frame = -2 Query: 242 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYW 745 ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V +P + D+ + + E +L V+E++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A ++ V ++IYD+ A+AA+GPI+ LPD+N W Sbjct: 320 LIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCTSVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSPAVAAVGPIEQLPDFNQICSNMRW 487
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: MPPB_BLAEM (Mitochondrial-processing peptidase subunit beta OS=Blastocladiella emersonii GN=MPP1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.046e-38 Identity = 86/172 (50.00%), Postives = 116/172 (67.44%), Query Frame = -2 Query: 233 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKP-DCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 745 M+GS+++ + G H S+LAQ V + +A S +FNT Y DTGL+G+Y + D LDDLA+ + E +LA SE +V A+ QLK+SLLL +DGT+PVAE+IGRQ+L YGRR+ E+ +D+V VKRVAN FIYDRD+AI A+GP++ LPDYN R RY Sbjct: 295 MIGSYDR-AAGNAHPSSKLAQIVAKHNLANSFTSFNTTYSDTGLWGIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAIAKQQLKTSLLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLAIVAVGPVECLPDYNRIRSAMNLLRY 465
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: QCR1_MOUSE (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.455e-35 Identity = 70/171 (40.94%), Postives = 108/171 (63.16%), Query Frame = -2 Query: 233 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 745 ++G ++ GG H+ S LA N++ +S FN +Y DTGL G + V +DD+ + + + +L +E++VTR +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA ++ + +++ YD+ A+A GPI+ LPDYN R +W R+ Sbjct: 310 IIGHYDCTCGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVCDAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.187e-35 Identity = 71/171 (41.52%), Postives = 106/171 (61.99%), Query Frame = -2 Query: 233 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 745 ++G ++ GG H+ S LA N++ +S FN Y DTGL G + V +DD+ + + + +L +E++V R +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA V+ V +++ YD+ A+A GPI+ LPDYN R +W R+ Sbjct: 310 IIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF 480
BLAST of CX043355 vs. ExPASy Swiss-Prot
Match: QCR1_RAT (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.327e-35 Identity = 70/171 (40.94%), Postives = 108/171 (63.16%), Query Frame = -2 Query: 233 MLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 745 ++G ++ GG H+ S LA N++ +S FN +Y +TGL G + V +DD+ + + + +L +E++VTR +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI+ VDA V+ V +++ YD+ A+A GPI+ L DYN R +W R+ Sbjct: 310 IIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSETGLLGAHFVCDAMSIDDMIFFLQGQWMRLCTSATESEVTRGKNILRNALISHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIEEVDAQMVREVCSKYFYDQCPAVAGYGPIEQLSDYNRIRSGMFWLRF 480 The following BLAST results are available for this feature:
BLAST of CX043355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043355 ID=CX043355; Name=CX043355; organism=Citrus sinensis; type=EST; length=746bpback to top |