CV712752
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712752 vs. ExPASy Swiss-Prot
Match: BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica GN=BRXL1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 281 SQTEASHCEATTKNKNRTMKAEPA--QGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 523 S +S E +++ ++ A Q EWVE+DE GVYIT+ ALPGG+++L+RVRFSR+KFSE A WW NRAR++ QY Sbjct: 314 SMRSSSSPEEVDRSRELSVSVSNASDQEREWVEEDEPGVYITIRALPGGIRELRRVRFSREKFSEMHARLWWEENRARIHDQY 396 HSP 2 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 59/182 (32.42%), Postives = 85/182 (46.70%), Query Frame = 2 Query: 41 AAKDVIKSLTAQLKDMAEMLPVGAVRNSN--SFHSSPTPAWDVSSAAIEQPSSPLTFQG----------AIPXXXXXXXXXXXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSS 550 + + IK+LTAQ+KDMA + GA R+ + SS +PA + A P G A DF + E E TT + +E + EWV Q E GV IT ++LP G DLKR+RFSR+ F++ QA++WWA N +V + YNV ++ + Sbjct: 41 STRQAIKALTAQIKDMA-LKASGAYRHCKPCAGSSSSSPA---AGARRHHPYHAYADSGSDRFHYAYRRAGSGGDATPSVSARTDFLAGDEEEEEEEEEEEGTTAD-----GSEDDEAKEWVAQVEPGVLITFLSLPEGGNDLKRIRFSREIFNKWQAQRWWAENYEKVMELYNVQRFNQQT 213
BLAST of CV712752 vs. ExPASy Swiss-Prot
Match: BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana GN=BRXL4 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 275 SPSQTEASHCEATTKN-------KNRTMKAEPAQG--DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 523 S ++TE S +A+ ++ ++ M A +EWVEQDE GVYIT+ LPGG ++L+RVRFSR++F E A WW NRAR+++QY Sbjct: 292 SVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPGGKRELRRVRFSRERFGEMHARLWWEENRARIHEQY 383 HSP 2 Score: 75.485 bits (184), Expect = 3.127e-13 Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 305 EATTKNKNRTMKAEPA------QGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSISI 559 EAT K+ + + +P + EWV Q E GV IT V+LPGG DLKR+RFSR F++ QA++WWA N +V + YNV + + + + Sbjct: 126 EATPKSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQAFPL 216
BLAST of CV712752 vs. ExPASy Swiss-Prot
Match: BRXL2_ARATH (Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15 Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 362 EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 523 EWVEQDE GVYIT+ ALP G ++L+RVRFSR+KF E A WW NRAR+ QQY Sbjct: 320 EWVEQDEAGVYITIRALPDGTRELRRVRFSREKFGETNARLWWEQNRARIQQQY 373 HSP 2 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 55/177 (31.07%), Postives = 82/177 (46.33%), Query Frame = 2 Query: 56 IKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAI---------PXXXXXXXXXXXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSISI 559 IKSLT+Q+KDMA + GA ++ S + S A + S+ F+ A P F ++ + E+T E + EWV Q E GV IT V+LP G D+KR+RFSR+ F + QA++WWA N +V + YNV ++ S+ + Sbjct: 40 IKSLTSQIKDMA-VKASGAYKSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSSTPKILGKEMESRLKGFLSGEGTPESMSGRTESTV------FMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFNQQSVPL 209
BLAST of CV712752 vs. ExPASy Swiss-Prot
Match: BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana GN=BRXL3 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15 Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 2 Query: 275 SPSQTEASHCEATTKNKNRTMKAEPAQGD------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 523 S ++TE S + + ++ + E + + EWVEQDE G+YIT+ ALP G ++L+RVRFSR KF E A WW NRAR+ QQY Sbjct: 281 SGTKTETSSTDGSARSSSVDRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQY 369
BLAST of CV712752 vs. ExPASy Swiss-Prot
Match: BRXL1_ARATH (Protein Brevis radix-like 1 OS=Arabidopsis thaliana GN=BRXL1 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14 Identity = 52/174 (29.89%), Postives = 85/174 (48.85%), Query Frame = 2 Query: 47 KDVIKSLTAQLKDMAEMLPVGAVRN-----SNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPXXXXXXXXXXXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSI 553 K+ +KSLT Q+KDMA ++ S+S + P +D +S ++ P P + P D+R S + ++ + + E + EW+ Q E GV+IT V+LP G DLKR+RFSR+ F + QA++WW N R+ + YNV ++ ++ Sbjct: 31 KEAVKSLTTQIKDMASKFSGSHKQSKPTPGSSSSNLRKFPDFDTASESVPYPY-PGGSTSSTPAWDLPRSSYHQSGRPDSRFTSMYGGERESISAQSCDVVL--EDDEPKEWMAQVEPGVHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGENYDRIVELYNVQRFNRQAL 201 HSP 2 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 290 EASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 523 +A+ +++++ +M EWVE+DE GVYIT+ LP G ++L+RVRFSR++F E A+ WW NR R+ QY Sbjct: 253 DAARITTSSRDEPPSMSNASEMQGEWVEEDEPGVYITIRQLPDGTRELRRVRFSRERFGEVHAKTWWEQNRDRIQTQY 330
BLAST of CV712752 vs. ExPASy Swiss-Prot
Match: BRXL3_ORYSJ (Putative protein Brevis radix-like 3 OS=Oryza sativa subsp. japonica GN=BRXL3 PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 62/198 (31.31%), Postives = 79/198 (39.90%), Query Frame = 2 Query: 17 GEETAKCRAAKDVIKSLTAQLKDMAEMLP--------VGAVRNSNSFHSS----PTPAWDVSSAAIEQPSSP----LTFQGAIPXXXXXXXXXXXXDFGDNRSPS----QTEASHCEATTK---------NKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 523 G A +D +KSLT+QLKDM A S SF S P P + + +A + P + A P + RS S Q +A T + E A EW Q E GV IT V LPGG DLKR+RFSR++F E +A+ WW NR R+ QY Sbjct: 16 GSRGAATPHGRDAVKSLTSQLKDMVLKFSGSNKHQHYKAATAGSPSFRSRSYRRPYPGF-IDDSAFMTTTRPGGEAYMYTRAAPPPPVRAASTSMATWDMTRSKSNRGWQQDAGRSPGGTTWIQSIEEEAGADDVTVVEDAVPREWTAQVEPGVQITFVTLPGGGNDLKRIRFSRERFGEDRAKVWWEHNRDRIQAQY 212
BLAST of CV712752 vs. ExPASy Swiss-Prot
Match: BRX_ARATH (Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 2 Query: 290 EASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 523 +A+ ++++ +M EW+E+DE GVYIT+ L G ++L+RVRFSR++F E A+ WW NR R+ QY Sbjct: 266 DAARTTTSSRDDPPSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRELRRVRFSRERFGEVHAKTWWEQNRERIQTQY 343
BLAST of CV712752 vs. ExPASy Swiss-Prot
Match: BRXL2_ORYSJ (Protein Brevis radix-like 2 OS=Oryza sativa subsp. japonica GN=BRXL2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 2 Query: 287 TEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 523 T +S EA+ N A + EWVEQDE GV IT+ G ++L+RVRFSR++F E++A+ WW NR R++ QY Sbjct: 336 TTSSRDEASVSISN----ASDLEATEWVEQDEPGVSITIREFGDGTRELRRVRFSRERFGEERAKVWWEQNRDRIHAQY 410
BLAST of CV712752 vs. ExPASy Swiss-Prot
Match: BRXL4_ORYSJ (Protein Brevis radix-like 4 OS=Oryza sativa subsp. japonica GN=BRXL4 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 341 AEPAQGD--EWVEQDETGVYITLVALPGGL-KDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 529 A PA+G+ EWV Q E GV IT V+L GG DLKR+RFSR+ + + QA++WW N R+ + YNV Sbjct: 78 ARPAEGEAREWVAQVEPGVQITFVSLAGGGGNDLKRIRFSREMYDKWQAQKWWGENNERIMELYNV 143 HSP 2 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 275 SPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 523 S + A +++++ A + EWV QDE GVYIT+ L G ++L+RVRFSR++F+E A+ WW N+ R+ QY Sbjct: 246 SDAMDAARTTSCSSRDEVSISNASELEVTEWVIQDEPGVYITVRELADGTRELRRVRFSRERFAELNAKLWWEENKERIQAQY 328 The following BLAST results are available for this feature:
BLAST of CV712752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712752 ID=CV712752; Name=CV712752; organism=Citrus sinensis; type=EST; length=704bpback to top |