CX047517
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 4.394e-28 Identity = 66/108 (61.11%), Postives = 75/108 (69.44%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGDMGFSLF 326 EDDLVEKFA+GVSM+TAL+LAISYPT+AAAPHMF+NAYKNV+AVALATEYSFPQA+ VKE+L DP+KF SDGDMGF LF Sbjct: 211 EDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKF--AVAVAAPVSGESGGAVVAVAVEEEAAEESDGDMGFDLF 316
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 7.494e-28 Identity = 66/110 (60.00%), Postives = 75/110 (68.18%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGDMGFSLFD 329 EDDL+ KFA+GVSMVT+L+LAISYPTLAAAPHMF+NAYKNV+AVA+ T+YSFP+ADKVKEYL DPSKF SD DMGFSLFD Sbjct: 211 EDDLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPAAAAKEEEKKEEPAEESDDDMGFSLFD 320
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 7.494e-28 Identity = 62/109 (56.88%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGDMGFSLFD 329 EDDL+EKFASGVSMV +++LAISYPT+AAAPHMF+N YKNV+AVA+ TEYS+P ADK+KEYL DPSKF SDGD+G SLFD Sbjct: 211 EDDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEEKKEEPEEESDGDLGMSLFD 319
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 2.181e-27 Identity = 57/68 (83.82%), Postives = 65/68 (95.59%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 206 ED LVEKFASG+SMVT+LALA+SYPTLAAAPHMFINAYKN +A+A+ATEY+FPQA+KVKEYL DPSKF Sbjct: 210 EDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKF 277
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.413e-26 Identity = 55/68 (80.88%), Postives = 65/68 (95.59%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 206 ED LVEKFASG+SMVT+LALA+SYPTLAAAPHMFINAYKN +A+A+AT+Y+FPQA+KVKE+L DPSKF Sbjct: 210 EDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKF 277
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA0_MAIZE (60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 1.196e-25 Identity = 61/109 (55.96%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGDMGFSLFD 329 E+DL+EKFA+GVSMV +L+LAISYPTLAA PHMFIN YKNV+AVA+ T+YS+P ADK+KEYL DPSKF SD +MGFSLFD Sbjct: 211 EEDLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIKEYLKDPSKF-AVAAPVAAGDSGASAAPKEEEKAAEPEEESDEEMGFSLFD 318
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA0_LUPLU (60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.869e-19 Identity = 55/111 (49.55%), Postives = 63/111 (56.76%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGDMGFSLFD 329 EDDL+EKFA GVS + P +AAPH+FINAYKNV+AVA+ATEYSFPQAD+VKEYL DPSKF SD +MGF LFD Sbjct: 211 EDDLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPAADSGAAPAAAAKAEKEEEPAEESDDEMGFGLFD 321
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA0_DANRE (60S acidic ribosomal protein P0 OS=Danio rerio GN=rplp0 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16 Identity = 45/109 (41.28%), Postives = 57/109 (52.29%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGDMGFSLFD 329 ED L ++F GV + ++ L I YPTLA+ PH IN YK V+AV + T+Y+FP A+KVK YLADP+ F SD DMGF LFD Sbjct: 211 EDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.262e-16 Identity = 44/109 (40.37%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGDMGFSLFD 329 E+ L ++F GV V ++ L I YPT+A+ PH +N YK V+AVA+ T+Y+FP A+KVK +LADPS F SD DMGF LFD Sbjct: 208 EETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAFVAAAPVVVETAAPAAAAAPAKEAPKEESEESDEDMGFGLFD 316
BLAST of CX047517 vs. ExPASy Swiss-Prot
Match: RLA0_ICTPU (60S acidic ribosomal protein P0 OS=Ictalurus punctatus GN=rplp0 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.122e-15 Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 3 EDDLVEKFASGVSMVTALALAISYPTLAAAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 206 ED L ++F GV + ++ L I YPTLA+ PH IN YK V+ VA+ T+YSFP ADKVK +LADPS+F Sbjct: 208 EDALHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVLRVAVETDYSFPMADKVKAFLADPSRF 275 The following BLAST results are available for this feature:
BLAST of CX047517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047517 ID=CX047517; Name=CX047517; organism=Citrus sinensis; type=EST; length=482bpback to top |