CV712751

Overview
NameCV712751
Unique NameCV712751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5667 contig Csv1_Contig5667:638..1457. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712751 vs. ExPASy Swiss-Prot
Match: UPTG2_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 2 OS=Solanum tuberosum GN=UPTG2 PE=1 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.222e-94
Identity = 160/189 (84.66%), Postives = 173/189 (91.53%), Query Frame = -3
Query:  252 NIPDYDAPTQLVKPLERNTRFVDAIMTIPKGTLFPMCGMNLGFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCSKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSATLPKECTTVQKCYIELAKQVKAKLGKVDEYFIKLADAMVTWIEAWDELNPPSGAKSTELPNGAA 818
            NIPDYDAPTQLVKP ERNTR+VDA+MTIPKGTLFPMCGMNL F+RELIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEE+IPF QSATLPK+CT+VQ+CY+EL+KQVK KL  +D YF KLADAMVTWIEAWDELN P+G    +LP+  A
Sbjct:  173 NIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFSQSATLPKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELN-PTGEGLAKLPSRTA 360          
BLAST of CV712751 vs. ExPASy Swiss-Prot
Match: UPTG_PEA (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Pisum sativum GN=UPTG PE=1 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 4.644e-94
Identity = 159/193 (82.38%), Postives = 174/193 (90.16%), Query Frame = -3
Query:  243 NIPDYDAPTQLVKPLERNTRFVDAIMTIPKGTLFPMCGMNLGFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCSKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSATLPKECTTVQKCYIELAKQVKAKLGKVDEYFIKLADAMVTWIEAWDELNPPSGAKSTEL-PNGAAATK 818
            NIPDYDAPTQLVKP ERNTRFVDA++TIPKG+LFPMCGMNL FNRELIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDHLG GVKTGLPYIWHSKASNPFVNLKKEYKGI+WQEE+IPFFQ+ATL K+CT+VQKCYIEL+KQVK KLG +D YFIKLADAMVTW+EAWDE+N     ++T    +  AATK
Sbjct:  172 NIPDYDAPTQLVKPHERNTRFVDAVLTIPKGSLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEINNNKSEETTSTKASEVAATK 364          
BLAST of CV712751 vs. ExPASy Swiss-Prot
Match: UPTG1_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 1 OS=Solanum tuberosum GN=UPTG1 PE=1 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.494e-92
Identity = 151/174 (86.78%), Postives = 165/174 (94.83%), Query Frame = -3
Query:  297 NIPDYDAPTQLVKPLERNTRFVDAIMTIPKGTLFPMCGMNLGFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCSKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSATLPKECTTVQKCYIELAKQVKAKLGKVDEYFIKLADAMVTWIEAWDELN 818
            NIPDYDAPTQLVKP ERNTR+VDA+MTIPKGTLFPMCGMNL F+R+LIGPAMYFGLMGDGQPIGRYDDMWAGWC+KVICDHLGLG+KTGLPYIWHSKASNPFVNLKKEY GI+WQEE+IPFFQ+ATLPKECTTVQ+CY+EL+KQVK KL  +D YF KL +AMVTWIEAWDELN
Sbjct:  169 NIPDYDAPTQLVKPHERNTRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHLGLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEEIIPFFQAATLPKECTTVQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELN 342          
BLAST of CV712751 vs. ExPASy Swiss-Prot
Match: UPTG_MAIZE (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Zea mays GN=UPTG PE=1 SV=2)

HSP 1 Score: 334.724 bits (857), Expect = 3.680e-91
Identity = 150/179 (83.80%), Postives = 164/179 (91.62%), Query Frame = -3
Query:  282 NIPDYDAPTQLVKPLERNTRFVDAIMTIPKGTLFPMCGMNLGFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCSKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSATLPKECTTVQKCYIELAKQVKAKLGKVDEYFIKLADAMVTWIEAWDELNPPSGA 818
            NIPDYDAPTQLVKP ERN R+VDA+MTIPKGTLFPMCGMNL F+R+LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDHL LGVKTGLPYIWHSKASNPFVNLKKEYKGI+WQE++IPFFQ+ T+PK+C TVQKCYI L+ QVK KLG +D YF+KL DAMVTWIEAWDELNP + A
Sbjct:  179 NIPDYDAPTQLVKPKERNERYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNVTIPKDCDTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDELNPSTPA 357          
BLAST of CV712751 vs. ExPASy Swiss-Prot
Match: UPTG_PHODC (Alpha-1,4-glucan-protein synthase [UDP-forming] (Fragments) OS=Phoenix dactylifera PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = -3
Query:  501 KVICDHLGLGVKTGLPYIWHSKASNPFVNLK 593
            KVICDHLGLGVKTGLPYIWHSKASNPFVNLK
Sbjct:   30 KVICDHLGLGVKTGLPYIWHSKASNPFVNLK 60          
The following BLAST results are available for this feature:
BLAST of CV712751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
UPTG2_SOLTU1.222e-9484.66Alpha-1,4-glucan-protein synthase [UDP-forming] 2 ... [more]
UPTG_PEA4.644e-9482.38Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG1_SOLTU1.494e-9286.78Alpha-1,4-glucan-protein synthase [UDP-forming] 1 ... [more]
UPTG_MAIZE3.680e-9183.80Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG_PHODC9.911e-12100.00Alpha-1,4-glucan-protein synthase [UDP-forming] (F... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N14_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712751 ID=CV712751; Name=CV712751; organism=Citrus sinensis; type=EST; length=820bp
TAAATAATTCATAATAATTCTCGATCAACGTCCAATGAAACAAGCTAACA
CTCAACCTAGTCAATACATAAACTCGACGCTTGCTTATTGTTCTAAACTC
AATAACATTGTAATAAATAAAATTATACCCCTCCGATCTGCAAAATAAAT
ATTCCAAGCCCCGAAGCAGAAGCTCGAACAAATGGCTGTGAACTGTGTCT
ATGACTATCAAAAGGGATGATAAATGTTGATCAAGTAATCTATTTTGTAG
CAGCAGCACCGTTAGGCAACTCTGTGGATTTTGCTCCAGATGGTGGGTTC
AGTTCATCCCATGCTTCGATCCATGTGACCATTGCGTCGGCCAGCTTGAT
GAAGTATTCATCAACCTTACCAAGTTTTGCCTTAACTTGCTTGGCCAGTT
CAATGTAGCACTTCTGCACGGTGGTGCATTCCTTTGGAAGTGTGGCAGAT
TGGAAGAATGGGATCAGCTCTTCCTGCCAGTAGATTCCTTTGTATTCCTT
CTTGAGATTCACAAACGGGTTGCTAGCTTTGCTGTGCCAGATGTAAGGCA
ACCCTGTCTTCACACCCAATCCCAAGTGATCACAAATAACCTTGGAGCAC
CAACCAGCCCACATGTCATCATAGCGTCCAATTGGCTGGCCATCACCCAT
GAGTCCGAAGTACATTGCAGGACCGATCAATTCACGGTTGAATCCCAGAT
TCATACCACACATGGGGAAGAGGGTTCCCTTTGGTATTGTCATAATTGCA
TCCACAAACCTAGTGTTCCTCTCAAGAGGCTTGACAAGCTGGGTGGGAGC
ATCATAATCTGGGATGTTGA
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