CV712743

Overview
NameCV712743
Unique NameCV712743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3845 contig Csv1_Contig3845:134..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLEO1_PRUDU (Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.774e-40
Identity = 85/114 (74.56%), Postives = 98/114 (85.96%), Query Frame = -1
Query:  274 RPRSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 615
            +PRS+Q         AGGSLLVLSGL +AGTVIALTIATPLLVI SPVLVPA+ITV+L+ MGFL SGGFGVAA++VLSWIY+YVTG  PPGADQL+QAR KLAGKAR+++DRAE
Sbjct:   20 QPRSYQVAKAATAVTAGGSLLVLSGLVLAGTVIALTIATPLLVIFSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAGKARDIKDRAE 133          
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLEO2_BRANA (Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.315e-35
Identity = 74/112 (66.07%), Postives = 91/112 (81.25%), Query Frame = -1
Query:  274 RSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 609
            +S Q         AGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL GK ++M+DRA+
Sbjct:   41 KSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQDMKDRAQ 152          
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.998e-35
Identity = 73/112 (65.18%), Postives = 91/112 (81.25%), Query Frame = -1
Query:  274 RSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 609
            +S Q         AGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++++DRA+
Sbjct:   39 KSRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQ 150          
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.526e-35
Identity = 72/112 (64.29%), Postives = 91/112 (81.25%), Query Frame = -1
Query:  274 RSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 609
            +S Q         AGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV++LI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++++DRA+
Sbjct:   53 KSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVAMLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQ 164          
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.110e-33
Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = -1
Query:  277 RSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRA 609
            +S Q         AG SLLVLS LT+ GTVIAL +ATPLLVI SP+LVPA+ITV+LLI GFL+SG FG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  KA++M+DRA
Sbjct:   41 KSRQIAKATTAVTAGDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITGFLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRA 151          
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLEO1_ORYSJ (Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 6.755e-32
Identity = 64/98 (65.31%), Postives = 84/98 (85.71%), Query Frame = -1
Query:  274 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 567
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPPGADQL+ A+ +LA KAR++++ A+
Sbjct:   42 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKEAAQ 139          
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLE16_BROSE (Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.755e-32
Identity = 64/98 (65.31%), Postives = 84/98 (85.71%), Query Frame = -1
Query:  274 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 567
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I+++L+  GF+ SGG GVAA+SV SW+Y+Y+ G HPPGADQL+ A+ +LA KAR+++D A+
Sbjct:   61 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAISMALMSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKDAAQ 158          
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLEO1_MAIZE (Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.152e-31
Identity = 64/98 (65.31%), Postives = 83/98 (84.69%), Query Frame = -1
Query:  274 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMRDRAE 567
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPP ADQL+ A+ +LA KAR+++D A+
Sbjct:   50 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPAADQLDHAKARLASKARDVKDAAQ 147          
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLEO3_ARATH (Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 6.323e-30
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = -1
Query:  286 PRSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLAGKAREMR 612
            P++ Q         AGGSLLVLSGLT+AGTVIALT+ATPLLVI SPVLVPAV+TV+L+I GFLASGGFG+AAI+  SW+YR++TG    G+D++E ARMK+  + ++ +
Sbjct:   22 PKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTGS---GSDKIENARMKVGSRVQDTK 127          
BLAST of CV712743 vs. ExPASy Swiss-Prot
Match: OLES2_BRANA (Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17
Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = -1
Query:  307 PRSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLA 612
            P S+Q          GGSLL L+GLT+AG+VI L ++ PL ++ SPV+VPA IT+ L +   LASG FG+  +S +SW+  Y+ G      +QL+ A+ ++A
Sbjct:   44 PSSNQIVALIVGVPVGGSLLALAGLTLAGSVIGLMLSVPLFLLFSPVIVPAAITIGLAVTAILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMA 145          
The following BLAST results are available for this feature:
BLAST of CV712743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OLEO1_PRUDU1.774e-4074.56Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1[more]
OLEO2_BRANA1.315e-3566.07Major oleosin NAP-II (Fragment) OS=Brassica napus ... [more]
OLEO1_ARATH4.998e-3565.18Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25... [more]
OLEO3_BRANA8.526e-3564.29Oleosin Bn-III OS=Brassica napus PE=2 SV=1[more]
OLEO5_BRANA6.110e-3363.96Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=... [more]
OLEO1_ORYSJ6.755e-3265.31Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=... [more]
OLE16_BROSE6.755e-3265.31Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 S... [more]
OLEO1_MAIZE1.152e-3165.31Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2[more]
OLEO3_ARATH6.323e-3060.55Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE... [more]
OLES2_BRANA4.700e-1742.16Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N10_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712743 ID=CV712743; Name=CV712743; organism=Citrus sinensis; type=EST; length=615bp
CAAAGACCAATAACAAAAACCCTGGCAGGAGCGCCCCACCACATTAACAA
AACTTATTACAGAGATTACCACGAATACAAAAAGGAAAAAACACATTGGC
ACAAATTAACAAGAAAATTAACACAAAAGACAACCAATGACCCCTCAACT
AGTATCATAGCCGTTTGATCTTCACCCATATCTTTATCAACCAACAACAA
CCCTTCATCACATGCATAACAACGCAGTTTAAGAACCCTGCTGCGAGCCA
GTGATTTGCTGCTGCCCAAACTGCTCAGCCCTGTCCCTCATCTCCCTAGC
CTTACCGGCCAGCTTCATCCGCGCCTGCTCCAGCTGATCCGCCCCTGGTG
GGTGCCCCCCAGTGACATACCTATAAATCCATGATAAGACGCTGATGGCT
GCTACACCGAATCCGCCAGAGGCCAAGAACCCCATGATGAGAAGAGAAAC
GGTGATAACCGCAGGGACAAGAACAGGACTACAAATGACTAGCAGTGGAG
TAGCAATGGTCAGTGCAATGACAGTCCCAGCCATGGTTAAGCCAGAGAGG
ACCAACAGAGACCCACCGGCTGTGACGGCGGTTGCCGCCTTCACGACCTG
GTGGGACCGGGGCCT
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