CV712709
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: R27A2_ARATH (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana GN=RPL27AB PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.694e-41 Identity = 80/93 (86.02%), Postives = 89/93 (95.70%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GKVGMRYFHKLRNKF CPIVN+DKLWS+VP++VKAK+SKDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTAEKKIKEAGGAVVLTA Sbjct: 54 GKVGMRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: R27A3_ARATH (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana GN=RPL27AC PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 3.773e-41 Identity = 79/93 (84.95%), Postives = 89/93 (95.70%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GKVGMRYFHKLRNKF CPIVN+DKLWS+VP++VKAK++KDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTAEKKIKEAGGAVVLTA Sbjct: 54 GKVGMRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: RL27A_TETTH (60S ribosomal protein L27a OS=Tetrahymena thermophila GN=RPL27A PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 7.638e-26 Identity = 59/95 (62.11%), Postives = 72/95 (75.79%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKD--NVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GK+GMR FH +N HCP+VN+DKLWS+V + K ++D VP+IDVT+ G+FKVLGKG LP NQPVVVKAK SKTAE++I GGA VLTA Sbjct: 56 GKLGMRTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLP-NQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: RL27A_OSCBR (60S ribosomal protein L27a OS=Oscheius brevesophaga GN=rpl-27a PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.702e-25 Identity = 55/93 (59.14%), Postives = 69/93 (74.19%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GKVGMR FH +N +CP VNVD+LW++VP+E K K S + P+ID + GYFKVLGKG+LP+ QP++VKAK S AE KIK AGGA +L A Sbjct: 54 GKVGMRVFHLNKNHHYCPTVNVDRLWALVPEEQKTKVSAEKAPVIDCVKAGYFKVLGKGLLPK-QPLIVKAKFFSHEAENKIKAAGGACILVA 145
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: RL27A_DICDI (60S ribosomal protein L27a OS=Dictyostelium discoideum GN=rpl27a PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.791e-25 Identity = 52/96 (54.17%), Postives = 73/96 (76.04%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GK+GMR+FH LRN++HCP V+++K+W++VP+ V+ + N P++DVTQ G+FKVLG G+LP QP++VKA+ SK AEKKIK GGA +L A Sbjct: 54 GKLGMRHFHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-TQPIIVKARYFSKVAEKKIKAVGGACILVA 148
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: RL27A_EUPCR (60S ribosomal protein L27a OS=Euplotes crassus GN=RPL27A PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 4.191e-24 Identity = 55/95 (57.89%), Postives = 73/95 (76.84%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQE--VKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GK GMR+FH +RN+++CP +N+ KLWS+V +E KA+ K V +IDV + GY+KVLGKG+LPE P+VVKAKL + TAEK+IK+ GGA VL A Sbjct: 54 GKHGMRHFHLMRNQYYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPE-VPLVVKAKLFTPTAEKRIKQVGGACVLRA 147
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: RL27A_RAT (60S ribosomal protein L27a OS=Rattus norvegicus GN=Rpl27a PE=1 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 4.634e-23 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GKVGMR++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 54 GKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: RL27A_MACFA (60S ribosomal protein L27a OS=Macaca fascicularis GN=RPL27A PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.634e-23 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GKVGMR++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 54 GKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: RL27A_BOVIN (60S ribosomal protein L27a OS=Bos taurus GN=RPL27A PE=2 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 4.634e-23 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GKVGMR++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 54 GKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of CV712709 vs. ExPASy Swiss-Prot
Match: RL27A_PONAB (60S ribosomal protein L27a OS=Pongo abelii GN=RPL27A PE=2 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 6.052e-23 Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = -1 Query: 169 GKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 447 GKVGM+++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 54 GKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGACVLVA 148 The following BLAST results are available for this feature:
BLAST of CV712709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712709 ID=CV712709; Name=CV712709; organism=Citrus sinensis; type=EST; length=447bpback to top |