CV712700

Overview
NameCV712700
Unique NameCV712700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.013e-43
Identity = 88/110 (80.00%), Postives = 93/110 (84.55%), Query Frame = -2
Query:  189 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 518
            LRQVFGAQMGLSD+DIVALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DP FRPLVEK              AHLKLSELGFA+A
Sbjct:  141 LRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.578e-43
Identity = 87/110 (79.09%), Postives = 92/110 (83.64%), Query Frame = -2
Query:  189 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 518
            LRQVFGAQMGLSD+DIVALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DP F PLVEK              AHLKLSELGFA+A
Sbjct:  141 LRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.257e-42
Identity = 86/109 (78.90%), Postives = 90/109 (82.57%), Query Frame = -2
Query:  192 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAE 518
            LRQVF AQMGLSDKDIVALSGGHTLGRCHKERSGFEG WT NPLIFDNSYFTEL++GEK+GLLQLPSDKAL+ DP FRPLVEK              AHLKLSELGFAE
Sbjct:  142 LRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.707e-41
Identity = 86/110 (78.18%), Postives = 88/110 (80.00%), Query Frame = -2
Query:  189 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 518
            LR VFG  MGLSD+DIVALSGGHT+G  HKERSGFEGPWT NPLIFDNSYFTELLTGEKDGLLQLPSDKALL D VFRPLVEK              AHLKLSELGFAEA
Sbjct:  141 LRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 250          
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 5.204e-40
Identity = 83/110 (75.45%), Postives = 88/110 (80.00%), Query Frame = -2
Query:  189 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 518
            LR VF  QMGLSDKDIVALSG HTLGRCHK+RSGFEG WT NPLIFDNSYF ELL+GEK+GLLQL SDKALLDDPVFRPLVEK              AH+KLSELGFA+A
Sbjct:  141 LRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 250          
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 3.729e-38
Identity = 80/109 (73.39%), Postives = 88/109 (80.73%), Query Frame = -2
Query:  192 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAE 518
            LR VFG +MGL+DKDIVALSGGHTLGRCHKERSGFEG WT NPLIFDNSYF E+L+GEK+GLLQLP+DKALLDDP+F P VEK              AHLKLSELGFA+
Sbjct:  142 LRDVFG-RMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.416e-31
Identity = 70/107 (65.42%), Postives = 78/107 (72.90%), Query Frame = -2
Query:  198 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 518
            LR VF  +MGLSDKDIVALSGGHTLGR H ERSGF+GPWT+ PL FDNSYF ELL GE +GLL+LP+DK LL+DP FR LVE               +H KLSELGF
Sbjct:  139 LRDVF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELGF 244          
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.327e-30
Identity = 68/107 (63.55%), Postives = 77/107 (71.96%), Query Frame = -2
Query:  198 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 518
            LR +F ++MGL D+DIVALSGGHTLGR HKERS FEGPWT++PL FDNSYF ELL GE  GLLQL +DKALLDDP F P V+               +H KLSELGF
Sbjct:  137 LRTLF-SRMGLLDRDIVALSGGHTLGRAHKERSDFEGPWTQDPLKFDNSYFVELLKGETPGLLQLKTDKALLDDPKFHPFVKLYAKDEDMFFKAYAISHKKLSELGF 242          
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.327e-30
Identity = 68/107 (63.55%), Postives = 77/107 (71.96%), Query Frame = -2
Query:  198 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 518
            LR +F  +MGLSDKDIVALSGGHTLGR H ERSGFEG WT+ PL FDNSYF ELL GE +GLL+LP+DKALL+DP FR  V+               +H KLSELGF
Sbjct:  139 LRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
BLAST of CV712700 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.736e-27
Identity = 64/107 (59.81%), Postives = 76/107 (71.03%), Query Frame = -2
Query:  198 LRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 518
            LR+VF  +MGLSDKDIVALSGGHTLG+   ERSGF+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE               +H KLSELGF
Sbjct:  140 LREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
The following BLAST results are available for this feature:
BLAST of CV712700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
APX1_ORYSJ1.013e-4380.00L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI8.578e-4379.09L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ORYSJ4.257e-4278.90L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_PEA4.707e-4178.18L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ARATH5.204e-4075.45L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX2_ARATH3.729e-3873.39L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX3_ARATH4.416e-3165.42L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX5_ARATH8.327e-3063.55L-ascorbate peroxidase 5, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ8.327e-3063.55Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ1.736e-2759.81Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001M12_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001M12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712700 ID=CV712700; Name=CV712700; organism=Citrus sinensis; type=EST; length=834bp
CTAAAGGATGATAGTAACCATAGTATTCGACCCAACTTTTCACAATCCAC
CATGTGCAACAAAACAAAACCACAAAATTCCACCAACAACATCTTGAAAT
TCGAATTTTCTGAGAATTCAAAAAACATAAAATAGAGGCACACTGTTGTT
GGCATCATTCCAACCATTTATTTACTCAGGTAAATTTAGGCTTCAGCAAA
TCCTAGCTCAGAGAGCTTGAGATGAGCCTCAGCATAATCAGCGAAGAAAG
CGTCCTCATCCGCAGCATATTTCTCAACAAGAGGGCGGAAAACAGGGTCA
TCCAGAAGGGCCTTGTCGGATGGCAATTGCAGAAGACCATCCTTCTCACC
AGTCAAGAGCTCCGTGAAGTAGGAATTGTCAAAAATGAGAGGGTTGCGGG
TCCATGGTCCCTCAAATCCAGACCTCTCCTTGTGGCACCTTCCCAGGGTG
TGGCCACCAGAGAGAGCAACAATATCCTTGTCGCTGAGGCCCATCTGAGC
ACCAAAGACTTGCCTCAAGGAACAATGCATGTACGCTCGTAATCAAAATG
CAACTGCTCGGTTAAAAGCACATAAAACAAATTCTAATTAAAAGCACGTT
GAAGAAAAGTTAGTACCCGAAAAGAGGTGAGGTGTAGTTTTAGTAAAGAT
TGGAGCAATGTGTCANGCAAGTAGACGAGACCCATCTTCAGAAACGTCCA
AAAACGTATGCAAAAGTAGCGGTTACGGCTATTATCTTCGGATTCTCTCA
ATGTCTCAAGTTTGAGAAGCCACATACACTGCGTTCCATGCAACATTTTG
AATAAAATATTTGAAAATCTTTAGTTAAAACCTT
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