CX047402

Overview
NameCX047402
Unique NameCX047402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_PASMU (Naphthoate synthase OS=Pasteurella multocida GN=menB PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.421e-25
Identity = 63/114 (55.26%), Postives = 79/114 (69.30%), Query Frame = 3 
Query:  177 PSHDVVWR-IACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIR 512
            P  DV++  I   +    +TDI+Y K++ +GIAKITINRP+ RNAFRP TVKE+I+AF DAR D  +GVI+LTG+G +AFCSGGDQ +R    GY D      LNVLD Q  IR
Sbjct:    4 PKDDVLYAPIEWQDHSEGYTDILYHKSL-DGIAKITINRPEVRNAFRPQTVKEMIQAFADARFDEQIGVIVLTGQGEKAFCSGGDQKVRGDYGGYQDESGVHHLNVLDFQRDIR 116
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_HAEIN (Naphthoate synthase OS=Haemophilus influenzae GN=menB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.018e-23
Identity = 60/114 (52.63%), Postives = 78/114 (68.42%), Query Frame = 3 
Query:  177 PSHDVVWR-IACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIR 512
            P  DV++  +   +    ++DI Y K+  +GIAKITINRP+ RNAFRP TVKE++ AF+DAR D ++GVI+LTG+G +AFCSGGDQ +R    GY D      LNVLD Q  IR
Sbjct:    4 PKDDVLYAPVEWIDHSEGYSDIRYHKST-DGIAKITINRPEVRNAFRPQTVKEMMTAFSDARFDENIGVIVLTGEGEKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRDIR 116
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_ECOLI (Naphthoate synthase OS=Escherichia coli (strain K12) GN=menB PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.018e-23
Identity = 61/96 (63.54%), Postives = 69/96 (71.88%), Query Frame = 3 
Query:  228 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIR 512
            F DI YEK+  +GIAKITINRP  RNAFRP TVKE+I+A  DAR D ++GVIILTG G +AFCSGGDQ +R    GY D      LNVLD Q QIR
Sbjct:   22 FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIR 116
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_ECOL6 (Naphthoate synthase OS=Escherichia coli O6 GN=menB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.018e-23
Identity = 61/96 (63.54%), Postives = 69/96 (71.88%), Query Frame = 3 
Query:  228 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIR 512
            F DI YEK+  +GIAKITINRP  RNAFRP TVKE+I+A  DAR D ++GVIILTG G +AFCSGGDQ +R    GY D      LNVLD Q QIR
Sbjct:   22 FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIR 116
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_STAS1 (Naphthoate synthase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=menB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.268e-23
Identity = 57/100 (57.00%), Postives = 72/100 (72.00%), Query Frame = 3 
Query:  213 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIR 512
            E+  E+ +I YE  + +GIAK+TINRP+ RNAF P+TV+E+I AF  ARDD  + VIILTG+G +AFCSGGDQ +R   GY   +   RLNVLDLQ  IR
Sbjct:    6 ETIREYKEIKYE--LYDGIAKVTINRPEVRNAFTPNTVQEMIDAFTRARDDQRISVIILTGEGDKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIR 103
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_STAEQ (Naphthoate synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.962e-23
Identity = 58/100 (58.00%), Postives = 71/100 (71.00%), Query Frame = 3 
Query:  213 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIR 512
            E+  E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G +AFCSGGDQ  R   GY   ++  RLNVLDLQ  IR
Sbjct:    6 ETLREYDEIKYE--FFEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIR 103
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_STAHJ (Naphthoate synthase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=menB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.869e-23
Identity = 58/100 (58.00%), Postives = 70/100 (70.00%), Query Frame = 3 
Query:  213 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIR 512
            E+  E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD ++ VIILTG+G +AFCSGGDQ  R   GY   +   RLNVLDLQ  IR
Sbjct:    6 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNISVIILTGEGDKAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIR 103
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_STAES (Naphthoate synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.869e-23
Identity = 57/96 (59.38%), Postives = 69/96 (71.88%), Query Frame = 3 
Query:  225 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIR 512
            E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G +AFCSGGDQ  R   GY   ++  RLNVLDLQ  IR
Sbjct:   10 EYDEIKYE--FFEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIR 103
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_STAAW (Naphthoate synthase OS=Staphylococcus aureus (strain MW2) GN=menB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.619e-23
Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 3 
Query:  213 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIR 512
            E+  E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G  AFCSGGDQ  R   GY   +   RLNVLDLQ  IR
Sbjct:    7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIR 104
[Close]
BLAST of CX047402 vs. ExPASy Swiss-Prot
Match: MENB_STAAS (Naphthoate synthase OS=Staphylococcus aureus (strain MSSA476) GN=menB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.619e-23
Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 3 
Query:  213 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIR 512
            E+  E+ +I YE    EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G  AFCSGGDQ  R   GY   +   RLNVLDLQ  IR
Sbjct:    7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIR 104
The following BLAST results are available for this feature:
BLAST of CX047402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
MENB_PASMU1.421e-2555.26Naphthoate synthase OS=Pasteurella multocida GN=me... [more]
MENB_HAEIN1.018e-2352.63Naphthoate synthase OS=Haemophilus influenzae GN=m... [more]
MENB_ECOLI1.018e-2363.54Naphthoate synthase OS=Escherichia coli (strain K1... [more]
MENB_ECOL61.018e-2363.54Naphthoate synthase OS=Escherichia coli O6 GN=menB... [more]
MENB_STAS12.268e-2357.00Naphthoate synthase OS=Staphylococcus saprophyticu... [more]
MENB_STAEQ2.962e-2358.00Naphthoate synthase OS=Staphylococcus epidermidis ... [more]
MENB_STAHJ3.869e-2358.00Naphthoate synthase OS=Staphylococcus haemolyticus... [more]
MENB_STAES3.869e-2359.38Naphthoate synthase OS=Staphylococcus epidermidis ... [more]
MENB_STAAW8.619e-2358.00Naphthoate synthase OS=Staphylococcus aureus (stra... [more]
MENB_STAAS8.619e-2358.00Naphthoate synthase OS=Staphylococcus aureus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A01_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A01-B1-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047402 ID=CX047402; Name=CX047402; organism=Citrus sinensis; type=EST; length=516bp
GCTTCTCACTGACCTTCCAAACTCCAATGGCGCCGCAAATTGATTCCGCG
AGGAGAAGAATGACCGCTGTTGCCAACCATCTTGTTCCGGTCATCAGTTC
GGAATCGAATAGCGGTTTCATCGGGTTAAATAATGCCTCGATGAATGATA
GCTATCACCGGATACACGGTGAAGTGCCAAGCCACGATGTCGTTTGGAGA
ATTGCATGTGATGAGTCTGGCACGGAATTCACCGACATTATTTATGAAAA
AGCTGTCGGTGAAGGTATTGCCAAGATTACGATTAATAGGCCGGACAGAA
GAAACGCGTTTCGGCCACATACAGTTAAGGAGCTCATTCGCGCGTTTAAT
GATGCTAGAGATGATAGTTCCGTGGGAGTCATTATTCTTACCGGGAAGGG
AACTGAGGCATTTTGTAGTGGTGGTGACCAAGCATTGAGAACCAGAGATG
GTTATGCCGATTATGAAAATTTTGGCCGCCTTAATGTTTTAGATTTGCAG
GTTCAGATTCGGCGTC
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