CV712655

Overview
NameCV712655
Unique NameCV712655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12382 contig Csv1_Contig12382:661..1506. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 8.953e-80
Identity = 148/218 (67.89%), Postives = 157/218 (72.02%), Query Frame = -1
Query:  193 KFLGDFKQAESVPAVQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 846
            K LGD KQAESVP VQ                                                  PSKMILD+WKRLYSNTK+NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+EPP+KVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGE+LLDAKCFK
Sbjct:  201 KVLGDVKQAESVPPVQKKAPPPKEQKPKEAKKEAPKEAPKPKAVEKPEEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGESLLDAKCFK 418          
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.527e-79
Identity = 147/218 (67.43%), Postives = 157/218 (72.02%), Query Frame = -1
Query:  193 KFLGDFKQAESVPAVQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 846
            K +GD KQA+SVP VQ                                                  PSKMILD+WKRLYSNTK+NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+EPP+KVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGEALLDAKCFK
Sbjct:  201 KVMGDVKQADSVPQVQKKAAAPKEQKPKEAKKEAPKEAPKPKAAEKPEEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGEALLDAKCFK 418          
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.579e-79
Identity = 133/151 (88.08%), Postives = 143/151 (94.70%), Query Frame = -1
Query:  193 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 645
            S M+LDDWKRLYSNTK+NFREVAIKGFWDMYDPEGYSLWFC+YKYNDENTVSFVTLNKV GFLQRMDLARKYAFGKML+IG+EPP+KVKGLWLFRG EIP FVM+ECYDMELY+W K D+SDE QKERVNQ+IED EPFEGEALLDAKCFK
Sbjct:  272 SNMVLDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPPFVMEECYDMELYNWTKVDLSDENQKERVNQVIEDQEPFEGEALLDAKCFK 422          
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.094e-77
Identity = 134/151 (88.74%), Postives = 141/151 (93.38%), Query Frame = -1
Query:  193 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 645
            S M+LDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKV GFLQRMDLARKY+FGKMLI G+E P+KVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  263 SPMVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 413          
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.094e-77
Identity = 134/151 (88.74%), Postives = 141/151 (93.38%), Query Frame = -1
Query:  193 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 645
            S M+LDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKV GFLQRMDLARKY+FGKMLI G+E P+KVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  264 SPMVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 414          
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.438e-77
Identity = 143/218 (65.60%), Postives = 154/218 (70.64%), Query Frame = -1
Query:  193 KFLGDFKQAESVPAVQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 846
            K +GDFKQAESVP VQ                                                   SKMILD+WKRLYSNTK+NFRE+AIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+ PP+KVKGLWLFRG +IPKFVMDE YDMELY+W K D+SDE QKERVN MIED EPFEGE LLDAKCFK
Sbjct:  201 KVIGDFKQAESVPPVQKKAAPPKESKAKEAKKEAPKEAPKPKVEASEEEEAPKPKPKNPLDLLPP--SKMILDEWKRLYSNTKTNFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQEPFEGEDLLDAKCFK 416          
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G_TRYCR (Elongation factor 1-gamma OS=Trypanosoma cruzi PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25
Identity = 61/152 (40.13%), Postives = 94/152 (61.84%), Query Frame = -1
Query:  193 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKK-ADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 645
            S  +LD +KR YSNT +  R VA   F+  YD  GY+ ++C YKYN++N + F+T N + G+ QRM+  RKYAFG  LIIG E  + +  LW+FRG  +P  ++++  D EL+DW++ AD++   Q+ER+   +    P     +L+ + FK
Sbjct:  265 SPFVLDAFKREYSNTDT--RTVAAPYFFQHYDAAGYTTFWCRYKYNEDNKMQFMTANLIRGWFQRMEHVRKYAFGVALIIGEERRHDIVALWVFRGRGMPA-IVEDVEDTELFDWEEVADVA--AQRERITDYLSWEGPTIPRPVLEGRVFK 411          
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G1_YEAST (Elongation factor 1-gamma 1 OS=Saccharomyces cerevisiae GN=CAM1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = -1
Query:  193 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPE-IPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPF----EGEALLDAKCFK 645
            S  +LDDWKR YSN  +  R VA+  FW+ Y+PE YSLW   YKYNDE T++F++ N V GF  R+  + KY FG +++ G      + G  + RG + +P F  D   D E YD+ K D ++++ KE +N M    +P     E + ++D K  K
Sbjct:  264 STFVLDDWKRKYSNEDT--RPVALPWFWEHYNPEEYSLWKVTYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDYVPAF--DVAPDWESYDYAKLDPTNDDDKEFINNMWAWDKPVSVNGEPKEIVDGKVLK 415          
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23
Identity = 53/144 (36.81%), Postives = 89/144 (61.81%), Query Frame = -1
Query:  220 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECY--DMELYDWKKADISDEEQKERVNQMIEDHEPFEGE 645
            S  ++D++KR YSN  +    VA+  FWD +D EG+S+W+ +Y++ +E T+SF++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+  F + E +  D E Y W+K D+  EE K     M++++  +EGE
Sbjct:  291 SSFVMDEFKRKYSNEDT--LTVALPYFWDHFDREGFSIWYAEYRFPEELTMSFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQEL-AFTLSEDWQIDYESYTWRKLDVDSEECK----TMVKEYFAWEGE 427          
BLAST of CV712655 vs. ExPASy Swiss-Prot
Match: EF1G2_YEAST (Elongation factor 1-gamma 2 OS=Saccharomyces cerevisiae GN=TEF4 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23
Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = -1
Query:  193 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEI-PKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPF----EGEALLDAKCFK 645
            S  +LDDWKR YSN  +  R VA+  FW+ Y+PE YS+W   YKYNDE T++F++ N V GF  R+  + KY FG +++ G      + G  + RG +  P F  D   D E Y++ K D + EE KE VN M    +P     E + ++D K  K
Sbjct:  261 STFVLDDWKRKYSNDDT--RPVALPWFWEHYNPEEYSIWKVGYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDFAPAF--DVAPDWESYEYTKLDPTKEEDKEFVNNMWAWDKPVVVNGEDKEIVDGKVLK 412          
The following BLAST results are available for this feature:
BLAST of CV712655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
EF1G2_ORYSJ8.953e-8067.89Elongation factor 1-gamma 2 OS=Oryza sativa subsp.... [more]
EF1G1_ORYSJ1.527e-7967.43Elongation factor 1-gamma 1 OS=Oryza sativa subsp.... [more]
EF1G_PRUAV7.579e-7988.08Elongation factor 1-gamma OS=Prunus avium PE=2 SV=... [more]
EF1G2_ARATH1.094e-7788.74Probable elongation factor 1-gamma 2 OS=Arabidopsi... [more]
EF1G1_ARATH1.094e-7788.74Probable elongation factor 1-gamma 1 OS=Arabidopsi... [more]
EF1G3_ORYSJ2.438e-7765.60Elongation factor 1-gamma 3 OS=Oryza sativa subsp.... [more]
EF1G_TRYCR6.302e-2540.13Elongation factor 1-gamma OS=Trypanosoma cruzi PE=... [more]
EF1G1_YEAST2.648e-2339.10Elongation factor 1-gamma 1 OS=Saccharomyces cerev... [more]
EF1G_CARAU5.898e-2336.81Elongation factor 1-gamma OS=Carassius auratus GN=... [more]
EF1G2_YEAST5.898e-2339.74Elongation factor 1-gamma 2 OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L10_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712655 ID=CV712655; Name=CV712655; organism=Citrus sinensis; type=EST; length=846bp
CAAAGAACCATTTGAAACTTGTATTAAAAAGATGTCCAAATCATCCTCAA
AATTGCGACAAAATTATAAGTTAATACTATAACACAAAATACTAGACTTC
GATCTTTCTGAATTCGAAACACAAACAAACTCTACCAATAACCAAAGACA
AACATGAACATCTTAAAACTAGAAAAAAGATTAAGCTCATCACTTGAAGC
ACTTAGCATCCAAAAGAGCTTCACCCTCAAAAGGCTCGTGATCCTCGATC
ATCTGGTTCACACGTTCCTTTTGCTCTTCGTCTGAGATGTCAGCCTTCTT
CCAGTCATACAATTCCATGTCATAGCACTCATCCATGACGAATTTAGGAA
TTTCTGGGCCACGGAAGAGCCACAACCCCTTGACTTTGTATGGAGGCTCG
TTGCCGATAATTAACATCTTTCCAAACGCATACTTGCGAGCCAGATCCAT
CCTCTGAAGAAACCCACTAACCTTGTTCAAGGTCACGAATGACACAGTAT
TCTCGTCATTGTATTTGTAATCACAGAACCAAAGTGAGTAACCCTCAGGA
TCATACATGTCCCAGAATCCTTTAATTGCAACTTCACGGAAGTTGGACTT
CGTGTTTGAGTAAAGCCTCTTCCAGTCATCCAGAATCATCTTACTTGGGG
GCAGCAGATCAAGAGGGTTCTTTGGTTTGGGCTTAGGTGCTTCCTCTTCT
TCAGCAGCTTCAGCTTTGGGCTTTGGTGCTTCTTTCTTTGGTTCCGCCTT
GGCCTTTGGTTTAGCAGATTCCTTAGCTTGAGCAGGCTTCTTTGCAGACT
GAACAGCTGGGACAGATTCGGCTTGCTTAAAATCACCCAAAAACTT
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