CV712617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: NP1L1_PONAB (Nucleosome assembly protein 1-like 1 OS=Pongo abelii GN=NAP1L1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 59/161 (36.65%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 1 LKFLKDIK--WFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 447 LK LKDIK + P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 193 LKHLKDIKVKFSGAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVP-----ESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: NP1L1_MOUSE (Nucleosome assembly protein 1-like 1 OS=Mus musculus GN=Nap1l1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 60/161 (37.27%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 1 LKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 447 LK LKDIK D P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 193 LKHLKDIKVKFSDAGQPMSFVLEFHFEPNDYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVP-----ENGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: NP1L1_HUMAN (Nucleosome assembly protein 1-like 1 OS=Homo sapiens GN=NAP1L1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 60/161 (37.27%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 1 LKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 447 LK LKDIK D P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 193 LKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVP-----ESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: NP1L1_BOVIN (Nucleosome assembly protein 1-like 1 OS=Bos taurus GN=NAP1L1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 60/161 (37.27%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 1 LKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 447 LK LKDIK D P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 193 LKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDS-----EAILAADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: YCO6_SCHPO (Putative nucleosome assembly protein C364.06 OS=Schizosaccharomyces pombe GN=SPCC364.06 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17 Identity = 54/153 (35.29%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 1 LKFLKDIKWFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDEDEP----ILEKAIGTEIEWYPGXXXXXXXXXXXXXXXXXXXXPITKTE-ECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAI 444 L L DI+ ++ P GFKLEF F NP+F N +LTKTY+ ++E P + + A G +++W + K +SFFNFFNPP P L +E DY IG ++K+IP AV WFTGEA+ Sbjct: 190 LSHLVDIRISYMEKP-GFKLEFEFAENPFFTNKILTKTYYYMEESGPSNVFLYDHAEGDKVDWKENADLTVRTVTKKQRNKNTKQTRVVKVSVPRDSFFNFFNPPTPP--SEEDEESESPELDELLELDYQIGEDFKEKLIPRAVEWFTGEAL 339
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: NPL1A_XENLA (Nucleosome assembly protein 1-like 1-A OS=Xenopus laevis GN=nap1l1-A PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17 Identity = 60/161 (37.27%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 1 LKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 447 LK LKDIK D P F LEFYF+PN +F N VLTKTY M E D P + G I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 193 LKHLKDIKVKFSDAGQPMSFTLEFYFEPNEFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFTPPEVP-----ENGELDDDAEAILTADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: NP1L1_RAT (Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus GN=Nap1l1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17 Identity = 60/161 (37.27%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 1 LKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 447 LK LKDIK D P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 192 LKHLKDIKVKFSDAGQPMSFILEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSKTSFFNFFAPPEVP-----ENGDLDDDXEAILAADFEIGHFLRERIIPRSVLYFTGEAIE 347
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: NP1L1_XENTR (Nucleosome assembly protein 1-like 1 OS=Xenopus tropicalis GN=nap1l1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17 Identity = 58/161 (36.02%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 1 LKFLKDIK--WFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 447 LK LKDIK + P F LEF+F+PN +F N VLTKTY M E D P + G I+W G +TKT +SFFNFF+PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 194 LKHLKDIKVKFSEAGQPMSFTLEFHFEPNDFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFSPPEVP-----ENGELDDDAEAILTADFEIGHFLRERIIPRSVLYFTGEAIE 349
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: NPL1B_XENLA (Nucleosome assembly protein 1-like 1-B OS=Xenopus laevis GN=nap1l1-B PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16 Identity = 57/161 (35.40%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 1 LKFLKDIK--WFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 447 LK LKDIK + P F LEF+F+PN +F N +LTKTY M E D P + G I+W G +TKT +SFFNFF+PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 194 LKHLKDIKVKFSEAGQPMNFMLEFHFEPNEFFTNELLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFSPPEVP-----ENGELDDDAEAILTADFEIGHFLRERIIPRSVLYFTGEAIE 349
BLAST of CV712617 vs. ExPASy Swiss-Prot
Match: NP1L4_HUMAN (Nucleosome assembly protein 1-like 4 OS=Homo sapiens GN=NAP1L4 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 58/161 (36.02%), Postives = 74/161 (45.96%), Query Frame = 1 Query: 1 LKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNTVLTKTYHMIDEDE---------PILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 447 LK L+DIK D P F LEF+F+PN YF N+VLTKTY M E + P + G I+W G ITK ESFFNFFNP + L + D++IG R++I+P AV +FTGEAI+ Sbjct: 185 LKHLQDIKVKFSDPGQPMSFVLEFHFEPNDYFTNSVLTKTYKMKSEPDKADPFSFEGPEIVDCDGCTIDWKKGKNVTVKTIKKKQKHKGRGTVRTITKQVPNESFFNFFNPLKASGDGESLDEDSEFTLAS----DFEIGHFFRERIVPRAVLYFTGEAIE 341 The following BLAST results are available for this feature:
BLAST of CV712617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712617 ID=CV712617; Name=CV712617; organism=Citrus sinensis; type=EST; length=716bpback to top |