CV712582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP1G1_MOUSE (AP-1 complex subunit gamma-1 OS=Mus musculus GN=Ap1g1 PE=1 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.839e-40 Identity = 78/188 (41.49%), Postives = 132/188 (70.21%), Query Frame = 2 Query: 11 EKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDEATFSG 574 EK++P K W+ID +++VL+ AG++V+D+ LI +I+N+ ++H YTV+ LY+A+ Q+ LV+VA WCIGEYGD+LV+ G E+PI VTE + +D++E + + S T+ A+ A++KLS+RF RI+ ++ S+ +ELQQR++E+N++ +K+ ++RS L+ERMPV+++ T +G Sbjct: 409 EKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVS--GQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNG 594
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP1G1_HUMAN (AP-1 complex subunit gamma-1 OS=Homo sapiens GN=AP1G1 PE=1 SV=5) HSP 1 Score: 166.007 bits (419), Expect = 1.839e-40 Identity = 78/188 (41.49%), Postives = 132/188 (70.21%), Query Frame = 2 Query: 11 EKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDEATFSG 574 EK++P K W+ID +++VL+ AG++V+D+ LI +I+N+ ++H YTV+ LY+A+ Q+ LV+VA WCIGEYGD+LV+ G E+PI VTE + +D++E + + S T+ A+ A++KLS+RF RI+ ++ S+ +ELQQR++E+N++ +K+ ++RS L+ERMPV+++ T +G Sbjct: 409 EKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVS--GQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNG 594
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP1G1_PONAB (AP-1 complex subunit gamma-1 OS=Pongo abelii GN=AP1G1 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.097e-40 Identity = 78/188 (41.49%), Postives = 131/188 (69.68%), Query Frame = 2 Query: 11 EKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDEATFSG 574 EK++P K W+ID +++VL+ AG++V+D+ LI +I+N+ ++H YTV+ LY+A+ Q+ LV+VA WCIGEYGD+LV+ G E PI VTE + +D++E + + S T+ A+ A++KLS+RF RI+ ++ S+ +ELQQR++E+N++ +K+ ++RS L+ERMPV+++ T +G Sbjct: 409 EKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVS--GQCEEEGPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEKVTTNG 594
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP1G2_MOUSE (AP-1 complex subunit gamma-like 2 OS=Mus musculus GN=Ap1g2 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.276e-33 Identity = 72/182 (39.56%), Postives = 117/182 (64.29%), Query Frame = 2 Query: 11 EKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLD 556 E+F+P K W+ID +L VL+ AG V+D+ L +I A +LH Y+VR LY A+ I Q+ LV+VA WCIGEYGD+L+ G +P V E D + ++E ++ H S T+ A+ AL+KLS+R + RIR ++ + LELQQR++E+N++ +K+ ++R+ ++E+MP+++ Sbjct: 410 ERFAPSKRWHIDTILHVLTTAGAHVRDDAVANLTQLIGEAEELHTYSVRRLYSALAEDISQQPLVQVAAWCIGEYGDLLLE--GNCEETEPFQVEEEDVLALLEKVLQSHMSLPATRGYAITALMKLSTRLRGDNNRIRQVVSIYGSCVDLELQQRAVEYNTLFQKYDHMRAAILEKMPLVE 589
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP1G2_HUMAN (AP-1 complex subunit gamma-like 2 OS=Homo sapiens GN=AP1G2 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.274e-33 Identity = 70/182 (38.46%), Postives = 117/182 (64.29%), Query Frame = 2 Query: 11 EKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLD 556 E+F+P K W+ID +L VL+ AG V+D+ L +I A +LH Y+VR LY A+ I Q+ LV+VA WCIGEYGD+L+ G +P+ V E + + ++E ++ H S T+ A+ AL+KLS+R + RIR ++ L +ELQQR++E++++ K+ ++R+ ++E+MP+++ Sbjct: 410 ERFAPTKRWHIDTILHVLTTAGTHVRDDAVANLTQLIGGAQELHAYSVRRLYNALAEDISQQPLVQVAAWCIGEYGDLLL--AGNCEEIEPLQVDEEEVLALLEKVLQSHMSLPATRGYALTALMKLSTRLCGDNNRIRQVVSIYGSCLDVELQQRAVEYDTLFRKYDHMRAAILEKMPLVE 589
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP1G_DICDI (AP-1 complex subunit gamma OS=Dictyostelium discoideum GN=ap1g1 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30 Identity = 69/189 (36.51%), Postives = 125/189 (66.14%), Query Frame = 2 Query: 5 MVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIED---PITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCS-ERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDE 559 + EK++P+K W ID +L+V+S AGNF+ DEV LI +IS+ +L Y V+ LY A++ I Q+ L +V +WCIGEYGD+LV + L ++ + V+E +D++++ +H ++ T+ ++ +L KLSSRF S +RI+ +I K ++ LELQQR+ E++++ + + ++++++RMP +++ Sbjct: 405 VTEKYAPNKRWQIDTILRVMSIAGNFIPDEVPSNLIQLISSTPELSSYAVQKLYLALKQDITQQPLTQVGLWCIGEYGDLLVADKSQLPKDEDGLSLNVSEQAVIDIIDLIFRHATTTQATRQYSLTSLAKLSSRFSQSSLQRIKTMIDNYKQNINLELQQRACEYSTLFDFDK--KASILDRMPPIEK 591
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP1G1_USTMA (AP-1 complex subunit gamma-1 OS=Ustilago maydis GN=APL4 PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.397e-26 Identity = 68/184 (36.96%), Postives = 106/184 (57.61%), Query Frame = 2 Query: 11 EKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITT---KAMAMVALLKLSSRFPSCSE--RIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMP 547 EKF+P+K W+ID +L+VL AGN+V++E+ A I ++ + +L YTV+ L+ + QESL A+W IGE+GD+L+ G N ED V E DVV++ S + + +L KL +R S+ RI II + S+ +E+QQRS+EF +++ K +IR ++E MP Sbjct: 411 EKFAPNKRWHIDTVLRVLKLAGNYVREEILSAFIRLVCHTPELQAYTVQKLFSGLHQDFSQESLTLAAVWVIGEFGDVLIQGG---NFEDEELVREVQPKDVVDLLSSVLDSPYVNGLIRQFVLTSLAKLHTRLSDASQQSRIEQIIASFETSVEVEIQQRSVEFATLL-KRSDIRQGVLESMP 590
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP1G1_SCHPO (AP-1 complex subunit gamma-1 OS=Schizosaccharomyces pombe GN=apl4 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.551e-23 Identity = 68/184 (36.96%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 17 FSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIED----PITVTESDAVDVVEIAIKH-HSSDITTKAMAMVALLKLSSRFPSCS--ERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMP 547 F+P+K W+ D +L+V AGNFV + + +I++A +LH Y V LY A++ + QE+L A W IGEYG ML++ +N +D P +V+ESD VD++E +S + AL KLS+R S S RI II K + E+QQRS+EF+ I+ + T++E P Sbjct: 439 FAPNKRWHFDTLLRVFKSAGNFVSESTLSTFLRLIASAPELHEYAVVKLYAALKEDVSQEALTLSAFWVIGEYGQMLLS--PTMNFDDDQTLPHSVSESDIVDIIEEVFNSVEASRYIIVQYGLFALTKLSARLGSSSTASRIDKIIYSYKRNKNTEVQQRSVEFHLIL-NDSKLSKTILEPTP 619
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP2A2_DICDI (AP-2 complex subunit alpha-2 OS=Dictyostelium discoideum GN=ap2a1-1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19 Identity = 43/187 (22.99%), Postives = 104/187 (55.61%), Query Frame = 2 Query: 2 SMVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNKGSLVLELQQRSIEFNSIVEKHQNIRSTLVERMPVLDEA 562 ++ EKF+ + WY+D +L++++ AG+FV D++W ++ +++N D+ Y ++ A+Q+ E+L++V + +GE+G ++ +N S V + K ++ TKA+ + K + FP +++ +++ Q++ + E+QQR+ E+ ++ ++++ T+++ +P +A Sbjct: 433 NLAEKFASNYSWYVDVILQLITTAGDFVSDDIWFRVVKIVTNHEDIQAYAASTVFNALQSRNCHETLIKVGGYILGEFGHLIADN-----------PQSSPLVQFNILHSKFNTCGAPTKALLLSTYAKFVNLFPELTQQTQEVFKQHQSYIDAEIQQRACEYLNLTSLNEDLMQTVLDVIPAFIDA 608
BLAST of CV712582 vs. ExPASy Swiss-Prot
Match: AP2A2_RAT (AP-2 complex subunit alpha-2 OS=Rattus norvegicus GN=Ap2a2 PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.160e-18 Identity = 56/210 (26.67%), Postives = 107/210 (50.95%), Query Frame = 2 Query: 5 MVEKFSPDKIWYIDQMLKVLSEAGNFVKDEVWHALIVVISNASDLHGYTVRALYRAVQTSIEQESLVRVAIWCIGEYGDMLVNNGGVLNIEDPITVTESDAVDVVEIAIKHHSSDITTKAMAMVALLKLSSRFPSCSERIRDIIVQNK--GSLVLELQQRSIEFNSI-VEKHQNIRSTLVERMPVLDEATFSGRRAGSLPATVSTSSGTS 625 + EK++ D WY+D +L ++ AG++V +EVW+ +I ++ N D+ GY + ++ A+Q E+LV+V + +GE+G+++ DP S + + K H + T+A+ + +K + FP I+D++ + + +ELQQR++E+ + +I +T++E MP E R S+ A + G S Sbjct: 430 LAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPACHENLVKVGGYILGEFGNLIAG--------DP---RSSPLIQFNLLHSKFHLCSVPTRALLLSTYIKFVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEYLRLSTVASTDILATVLEEMPPFPE------RESSILAKLKKKKGPS 622 The following BLAST results are available for this feature:
BLAST of CV712582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712582 ID=CV712582; Name=CV712582; organism=Citrus sinensis; type=EST; length=726bpback to top |