CV712558

Overview
NameCV712558
Unique NameCV712558
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2916 contig Csv1_Contig2916:26..641. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of CV712558 vs. ExPASy Swiss-Prot
Match: YCF68_EUCGG (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.846e-30
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = -2 
Query:  154 LRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG 285
            +RRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG
Sbjct:    1 MRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG 44

HSP 2 Score: 55.4546 bits (132), Expect = 7.846e-30
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = -1 
Query:   68 GFENKLLLRRIDGAIQVRSNVDPTFYSLV 154
            GFE K LLRRIDGAIQVRSNVDPTFYSLV
Sbjct:   44 GFETKPLLRRIDGAIQVRSNVDPTFYSLV 72
The following BLAST results are available for this feature:
BLAST of CV712558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCF68_EUCGG7.846e-3097.73Uncharacterized protein ycf68 OS=Eucalyptus globul... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001J02_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001J02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712558 ID=CV712558; Name=CV712558; organism=Citrus sinensis; type=EST; length=616bp
TAAGGGATGTATGGGGATTATCGAGAAGAGAGGAGCCGTGGTGGTCCCCC
CCGGACCGCCCGGATCCCACGAGTGAATAGAAAGTTGGATCTACATTGGA
TCTCACCTGAATCGCCCCATCTATCCTCCTGAGGAGGAGTTTGTTTTCAA
ACCCCCGGTTCGAACAGGAGAAGTACGCCATGCTAATGTGCCTTGGATGA
TCCACATCTCAGGGTCAGGCGCTGATGAGCACATTGAACTATCCATGTGG
CTGAGAGCCCTCACAGCCCAGGCACAACGACGCAATTATCAGGGGCGCGC
TCTACCACTGAGCTAATAGCCCGTCGTGCGGGCCTCCCGCTGGGGGCCCA
CTATGCCAAAAGCGAGAGAAACCCCATCCCTCTCTTTCCTTTTTACGCCC
CCAGGTCCCTCCCGTGTGGCGACATGGGGGCGTAAAAGGGGGATCCTATC
AACTTGTTCCGACCTAGGATAATAAGCTCATGGGCTTGGTCTTACTTCAC
CGTCGAGAAACGAAAGAAGACTTCCATCTCCAAGTTTAACTCAGGCGTAG
CTCGCTTCTTTTTGGGTGTGAAGCGGTGTCAAACCAAAATACCCAACAAG
CATTAGCTCTCCCTGA
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