CV712543

Overview
NameCV712543
Unique NameCV712543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV712543 vs. ExPASy Swiss-Prot
Match: ITPK4_ARATH (Inositol-tetrakisphosphate 1-kinase 4 OS=Arabidopsis thaliana GN=ITPK4 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.409e-48
Identity = 104/227 (45.81%), Postives = 147/227 (64.76%), Query Frame = 1 
Query:   73 VKGVILDESELLSASEHGTPTNANDSSFQLRPGASYLLRKLRHSNIRSGISYGPGLSPDKVNVLKRIAMEYSCECFFLHASMDGGV-NEITQAWGDVGGIIMYVVQNSKDSMCKLSSNWLITVVGAEVVTAGQNSSMLYVNKLEELPLTICCFNKKATCNNVVVVGYVMKPSREEDFAKRGAFPLYPTPNGLIFLPLTFEIPLSSQLQNVDVVLHKATDEIISIELS 750
            +KGV+LDES L S         + DSS  LR     LLR LR+S IR+GISYG  L  +KV++L++ A EYS  C  L  S+      +  +AW   G I+       ++ + +LS + L+ ++  E  +  ++ ++++++ LEELP+TICC NKKA  +   +V Y+MKPSR EDFAKRGA P+YPT  GLIFLPL FE PL+SQL++ D++ HKATDEI+SIEL+
Sbjct:    1 MKGVLLDESVLFSPE-------SEDSSPSLRESVPSLLRLLRYSMIRTGISYGLDLPENKVDLLRKTAAEYSINCLPLETSLTSVTFGDTLKAWYSDGSILYVASSRKEEILRELSPSQLVVLLDVEGDSL-EDPNIIHIHSLEELPMTICCINKKAMGDGAAIVAYIMKPSRVEDFAKRGALPMYPTSCGLIFLPLMFEFPLASQLKHADIIFHKATDEILSIELN 219
The following BLAST results are available for this feature:
BLAST of CV712543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ITPK4_ARATH4.409e-4845.81Inositol-tetrakisphosphate 1-kinase 4 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001I16_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001I16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712543 ID=CV712543; Name=CV712543; organism=Citrus sinensis; type=EST; length=755bp
CTCTTTCGCTGTGAAAGCCAACACAGAACACGAACACGAACAAAGAGGGG
AAAGAGAAAAATGAGTAATTTGGTTAAAGGAGTAATTTTGGACGAATCGG
AGCTGCTGTCGGCCTCCGAACACGGGACTCCTACAAATGCAAACGACTCG
TCGTTTCAGCTGCGGCCCGGAGCCTCCTACTTGCTTCGTAAGCTCCGCCA
CTCCAACATCCGATCGGGAATTTCTTATGGGCCGGGTCTTTCTCCTGATA
AGGTGAATGTGTTGAAAAGGATAGCAATGGAATACTCATGCGAATGCTTT
TTTCTGCATGCATCTATGGATGGTGGTGTAAATGAGATTACACAAGCTTG
GGGTGACGTCGGAGGAATTATTATGTATGTCGTTCAAAACAGCAAGGATT
CCATGTGTAAACTTAGCAGCAATTGGCTTATTACTGTCGTTGGTGCTGAA
GTTGTTACTGCAGGTCAGAATTCAAGCATGCTTTATGTCAACAAGCTAGA
AGAGTTACCTTTGACTATATGCTGCTTCAACAAAAAGGCAACTTGCAACA
ATGTTGTGGTGGTTGGTTATGTTATGAAGCCTTCGCGTGAAGAAGATTTT
GCTAAGAGGGGTGCATTTCCCTTGTATCCTACTCCAAACGGGTTGATATT
TCTACCTCTCACATTTGAGATCCCTCTATCATCTCAATTACAAAATGTTG
ATGTGGTTCTACATAAAGCAACAGATGAAATCATATCCATTGAGTTGAGC
AACGC
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