CV712513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UBE4_ARATH (Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana GN=PUB1 PE=1 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 3.049e-93 Identity = 176/235 (74.89%), Postives = 198/235 (84.26%), Query Frame = 3 Query: 3 SMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRHGEGLNIQSIKDTIQTTNGDMLID 707 +MLAFTSE+I APFLLPEM+ERVA+MLNYFLLQLVGPQRKSL+LKDPEKYEFRPKQLLKQIV IYV+LARGDT N+FP AISSDGRSYNEQLF+A ADVL +IGE+GRIIQEF+ELG LG+IPDEFLDPIQYTLM+DPVILPSSRITVDRP+IQRHLLSD DPFNR+HLT+DMLIP+ ELKAKI+EF+KS K+ G + S K+ IQTTN DMLID Sbjct: 805 TMLAFTSEEITAPFLLPEMVERVANMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKQLLKQIVRIYVNLARGDTVNIFPGAISSDGRSYNEQLFNAGADVLRRIGEEGRIIQEFMELGTKAKAAASEALDAEAALGEIPDEFLDPIQYTLMRDPVILPSSRITVDRPIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQSKKRTSGED-SSNKERIQTTNSDMLID 1038
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UBE4A_BOVIN (Ubiquitin conjugation factor E4 A OS=Bos taurus GN=UBE4A PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44 Identity = 98/202 (48.51%), Postives = 127/202 (62.87%), Query Frame = 3 Query: 9 LAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 614 LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L D DEFLDPI TLM DPV+LPSSR+TVDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++ Sbjct: 857 LAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UBE4A_HUMAN (Ubiquitin conjugation factor E4 A OS=Homo sapiens GN=UBE4A PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.615e-44 Identity = 98/202 (48.51%), Postives = 127/202 (62.87%), Query Frame = 3 Query: 9 LAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 614 LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L D DEFLDPI TLM DPV+LPSSR+TVDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++ Sbjct: 857 LAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIMAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UBE4A_PONAB (Ubiquitin conjugation factor E4 A OS=Pongo abelii GN=UBE4A PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.299e-43 Identity = 98/202 (48.51%), Postives = 127/202 (62.87%), Query Frame = 3 Query: 9 LAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 614 LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L D DEFLDPI TLM DPV+LPSSR+TVDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++ Sbjct: 857 LAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UBE4A_RAT (Ubiquitin conjugation factor E4 A OS=Rattus norvegicus GN=Ube4a PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.419e-43 Identity = 96/202 (47.52%), Postives = 126/202 (62.38%), Query Frame = 3 Query: 9 LAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 614 L+F + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL KI + G +I F L D DEFLDPI TLM DPV+LPSSR+TVD I RHLLSD TDPFNRS LT D + PNTELK KI+ ++ Sbjct: 857 LSFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDGSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UFD2_YEAST (Ubiquitin conjugation factor E4 OS=Saccharomyces cerevisiae GN=UFD2 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 5.108e-40 Identity = 91/205 (44.39%), Postives = 125/205 (60.98%), Query Frame = 3 Query: 21 SEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRIIQEFIE----LGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQ 623 S+ I A F+ PE++ R+ASMLNY L LVGP+ L +KDP+ Y F PK LLK + +Y++L+ Q+ F +A++ D RS+N LF A D+L + + G EFIE GD+PDEFLDP+ YT+MKDPVILP+S++ +DR I+ HLLSD+TDPFNR L + + PN EL+ KI F K + Sbjct: 752 SKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSE---QSEFISAVAKDERSFNRNLFVRAVDILGR--KTGLASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQK 951
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UFD2_SCHPO (Ubiquitin conjugation factor E4 OS=Schizosaccharomyces pombe GN=ufd2 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.426e-36 Identity = 85/210 (40.48%), Postives = 123/210 (58.57%), Query Frame = 3 Query: 6 MLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK----IGEDGRIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQ 623 ML + I F E+++R+A+MLNY L L GP+ +L ++DP KY F K LL I +Y++L + F A++ DGRSY++++F A ++ K D I+EF+ +GDIPD FLDP+ +T+MKDPV+LP S I++DR I+ HLLSDATDPFNR+ LT D + PN L+ +I F+KS+ Sbjct: 798 MLKLFTSSIPKAFCAVEIVDRLAAMLNYNLQALCGPKCSNLKVEDPTKYHFNAKTLLSIIFDVYLNLCN---EPAFVEAVAHDGRSYSKEIFERATSIMTKHNLKSSFDIEAIKEFVN---RVEAFRLQEATEEEDMGDIPDYFLDPLMFTIMKDPVVLPRSGISIDRSTIKAHLLSDATDPFNRTPLTLDDVTPNDTLREEINTFLKSK 1001
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UBE4B_MOUSE (Ubiquitin conjugation factor E4 B OS=Mus musculus GN=Ube4b PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.347e-32 Identity = 87/214 (40.65%), Postives = 120/214 (56.07%), Query Frame = 3 Query: 6 MLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHL--ARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 638 M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L AR F AI+ D RSY+++LF + K G I I++F L D PDEF DP+ TLM DPV LPS + +DR +I RHLL+ TDPFNR LT ML P ELK +I+ +++ + H Sbjct: 967 MFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCAR------FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTV-MDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWMREKQSSDH 1173
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UBE4B_HUMAN (Ubiquitin conjugation factor E4 B OS=Homo sapiens GN=UBE4B PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.347e-32 Identity = 88/214 (41.12%), Postives = 120/214 (56.07%), Query Frame = 3 Query: 6 MLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHL--ARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDGRI-IQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 638 M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L AR F AI+ D RSY+++LF + K G I I++F L D PDEF DP+ TLM DPV LPS I +DR +I RHLL+ TDPFNR LT ML P ELK +I+ +++ + H Sbjct: 1096 MFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCAR------FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTI-MDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1302
BLAST of CV712513 vs. ExPASy Swiss-Prot
Match: UBE4_CAEEL (Probable ubiquitin conjugation factor E4 OS=Caenorhabditis elegans GN=ufd-2 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.482e-26 Identity = 71/193 (36.79%), Postives = 107/193 (55.44%), Query Frame = 3 Query: 39 PFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGEDG-RIIQEFIELGXXXXXXXXXXXXXXXXLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 614 PF P + ER+A+MLN+ L QL+G + L +KDP Y + P++ + ++ IY+ L F I+ D R+Y+ + F A + + K G ++ F L D+P+EF DPI +M DPV LPS + +DR VI+RHLLS +PFNR+ L+ + L P++ELKAKI+E+I Sbjct: 785 PFRTPVLGERLAAMLNHNLSQLIGSKASELKVKDPRSYGWEPREFVSLLISIYLKL----NMPAFVKYIAYDERTYSPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEYEAKAELEEEYDDVPEEFKDPIMDAIMVDPVKLPSGHV-MDRAVIERHLLSTPNNPFNRAPLSHNELSPDSELKAKIQEWI 972 The following BLAST results are available for this feature:
BLAST of CV712513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712513 ID=CV712513; Name=CV712513; organism=Citrus sinensis; type=EST; length=825bpback to top |