CV712508

Overview
NameCV712508
Unique NameCV712508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV712508 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 2 
Query:  329 VVASMYWLEVIKYRGVVSAQAHHEEII*DLYKSIQDPQKGLVHGGIIREHDLLPSAYYNH*VTTKNGLFNLRLSIELSDFIWE*LFSFLLIHDVNIVCPQPH-FYLHYLQRSKILILQKK 685
            VVASM W E+ KYRG+VSAQAH EEII DLYK +QDPQ+GLVH G+IREH +              G    R+ I   D + E  FS +L+H++  +    +    +Y+ R   +I+QK+
Sbjct:  738 VVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHFIA--------FRRATGQIPQRI-IFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKR 848
The following BLAST results are available for this feature:
BLAST of CV712508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AGOL_ARATH3.203e-1543.33Argonaute-like protein At2g27880 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001H20_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712508 ID=CV712508; Name=CV712508; organism=Citrus sinensis; type=EST; length=689bp
GGTCATGCTTAAATATGATATAAGAGGTTGGTCTCGGCTAAGACGAAGAT
TTATCTGTCTGGTACAGACTATAATCTAAGGCAACTGTTCAGTGGTTAAT
ATTTCTTAAATTCTTTTGCTTATTCATTTGTTTTTTGAACTCTTTGGATG
GTGGTAGTTCATTGTCATACAGTATTAAGAGGAAGATGACTTCATGAGCA
ATTTATATCAAAAGTTGGAAAAAGAAATGCACAAAATGGTGGCAGTCTTT
TCAAACGAAATGGGAACAACTGCAAAGGCTCAAGTGAATAGTTTAATGAA
GCTGTTGAAAGTGCTGGGCTAAACCGAGGTGGTGGCCTCGATGTATTGGC
TAGAAGTAATCAAGTACAGAGGAGTTGTCTCTGCTCAGGCGCACCATGAG
GAAATTATCTGAGATCTCTATAAATCTATTCAAGATCCTCAGAAAGGTTT
AGTTCATGGAGGAATAATCAGGGAGCATGATCTACTGCCATCAGCTTACT
ACAATCATTAAGTAACAACAAAAAATGGCTTGTTCAACTTACGCCTATCC
ATTGAACTAAGTGACTTTATTTGGGAATAATTGTTTTCATTTCTATTAAT
ACATGACGTAAATATAGTCTGCCCCCAACCTCACTTTTATTTGCATTACT
TACAAAGATCCAAAATATTAATTCTGCAAAAAAAAAAAA
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