CV712495

Overview
NameCV712495
Unique NameCV712495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length317
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13743 contig Csv1_Contig13743:109..420. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CV712495 vs. ExPASy Swiss-Prot
Match: TOM5_ARATH (Mitochondrial import receptor subunit TOM5 homolog OS=Arabidopsis thaliana GN=TOM5 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 4.470e-16
Identity = 36/54 (66.67%), Postives = 46/54 (85.19%), Query Frame = 2 
Query:   53 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 214
            M ++VVS+EK+KA WHS+VHDE+KWA+N KLLRA G+FA  + LMRSYGDLM +
Sbjct:    1 MVNNVVSIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54
The following BLAST results are available for this feature:
BLAST of CV712495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TOM5_ARATH4.470e-1666.67Mitochondrial import receptor subunit TOM5 homolog... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001H12_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712495 ID=CV712495; Name=CV712495; organism=Citrus sinensis; type=EST; length=317bp
AGGCCCTCAGCGAAAAAATTCGAGTCGACTTTAGCGGTTCATAAACAATT
CAATGGCAGACTCGGTGGTTTCGTTGGAGAAAGTAAAGGCCTTCTGGCAC
TCTCAGGTTCACGACGAGGAGAAATGGGCTCTCAACGCGAAACTGCTGCG
TGCTGGTGGCCTGTTTGCAGCGTCGATTTTTCTGATGCGCAGTTATGGTG
ATCTTATGGCAATATGAGGAATCATGAAGGGCTGTTGTCCCAACTCCAAA
TTATGCCCAAGACTGGAGTGTATTTCTTATGTTTTTGGATCAATTTTTAG
GATTTTTTTTCAAAAAA
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