CV712486

Overview
NameCV712486
Unique NameCV712486
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RPM1_ARATH (Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.455e-39
Identity = 93/272 (34.19%), Postives = 145/272 (53.31%), Query Frame = 2
Query:    2 LWGIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHI----HELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            L GI++ K KLI  +++   +R                   +F +  ++ HF S AWVT+ K Y   ++ RT+IKEF+  +    P E++ +   EL+  L  +L+ K Y+VV DDVW    W ++  AL D     R+++TTR MNVA     S P  I    HE+E L  +EAW LF  KA            L+ +++ ++ +C+GLPLAI ++G ++STK +  SEWKK++  L   L ++  LK    ++   ++DLP+ LK C LY
Sbjct:  172 LVGIDAPKGKLIGRLLSPEPQRIVVAVVGMGGSGKTTLSANIFKSQSVRRHFESYAWVTISKSYVIEDVFRTMIKEFYKEADTQIPAELYSLGYRELVEKLVEYLQSKRYIVVLDDVWTTGLWREISIALPDGIYGSRVMMTTRDMNVA-----SFPYGIGSTKHEIELLKEDEAWVLFSNKAFPASLEQCRTQNLEPIARKLVERCQGLPLAIASLGSMMSTK-KFESEWKKVYSTLNWELNNNHELKIVRSIMFLSFNDLPYPLKRCFLY 437          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R13L4_ARATH (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.272e-27
Identity = 71/229 (31.00%), Postives = 119/229 (51.97%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFS-GQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDF-WGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRL-GSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLL 802
            +FN+  ++  F  R WV+V + + + +++R++++     S G      + K+++         +L  K Y++V DDVW  +  W D  +  L   + G +IVTTR  +VAK  ++      H  E L P+ +W LFC  A           EL+++ ++I+ KC+GLPL I AVGGLL  K+ V  EW+++ +     + G+     +    L   Y +LP HLKSC+L
Sbjct:  202 VFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNLGDASVGDDIGTLLRKIQQ---------YLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRGQGGSVIVTTRSESVAKRVQARDD-KTHRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNTSETDNVMSSLQLSYDELPSHLKSCIL 420          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R13L3_ARATH (Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.057e-26
Identity = 80/231 (34.63%), Postives = 122/231 (52.81%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKM--EEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDP-HLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            L+N+  +K  F  RAW  V +EY   ++L  +I+     S +   +E  KM  E+ EL   L G L+ KNYMVV DDVW  D W  ++ AL  + +  ++I+TTR   +A+  + +  V+ H+L  L   E+W LF RKA           +L+   ++++ KC GLPLAIV + GLLS K    +EW ++   L   L  +  H+   + V    + ++ H LK C LYF
Sbjct:  205 LYNSGDVKRRFDCRAWTYVSQEYKTRDILIRIIRSLGIVSAEE--MEKIKMFEEDEELEVYLYGLLEGKNYMVVVDDVWDPDAWESLKRALPCDHRGSKVIITTRIRAIAEGVEGT--VYAHKLRFLTFEESWTLFERKA--FSNIEKVDEDLQRTGKEMVKKCGGLPLAIVVLSGLLSRKR--TNEWHEVCASLWRRLKDNSIHI---STVFDLSFKEMRHELKLCFLYF 424          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RPP8_ARATH (Disease resistance protein RPP8 OS=Arabidopsis thaliana GN=RPP8 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.018e-25
Identity = 77/234 (32.91%), Postives = 124/234 (52.99%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXX---ELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGS-ILG----SDPHLKDCNRVLSEGYHDLPHHLKSCLL 802
            +F++D ++ HF   AWV V +++ +  + + +++E      QP   +I +M+E  L   L   L+   Y+VV DDVWK + W DV  A+   K+  ++++T+R+  V     +           L P E+WKL C +               E++ + ++++  C GLPLA+ A+GGLL+ K+  V EWK++FD +GS I+G     D  L    R+LS  Y DLP HLK C L
Sbjct:  205 VFHHDLVRRHFDGFAWVCVSQQFTQKHVWQRILQEL-----QPHDGDILQMDEYALQRKLFQLLEAGRYLVVLDDVWKKEDW-DVIKAVFPRKRGWKMLLTSRNEGVG--IHADPTCLTFRASILNPEESWKL-CERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKH-TVPEWKRVFDNIGSQIVGGSWLDDNSLNSVYRILSLSYEDLPTHLKHCFL 428          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RPP13_ARATH (Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.308e-24
Identity = 75/227 (33.04%), Postives = 114/227 (50.22%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            L+N+  +K  F  RAW  V +EY   ++L  +I+     SG+    +I K  E EL   L G L+ K Y+VV DD+W+ + W  ++ AL  N +  R+I+TTR   VA+        + H+L  L   E+W+LF ++A           +L +  ++++ KC GLPL IV + GLLS K    SEW  + + L   L  D  +     V    + +L H  K C LY
Sbjct:  205 LYNSRDVKERFEYRAWTYVSQEYKTGDILMRIIRSLGMTSGEELE-KIRKFAEEELEVYLYGLLEGKKYLVVVDDIWEREAWDSLKRALPCNHEGSRVIITTRIKAVAEGV--DGRFYAHKLRFLTFEESWELFEQRA--FRNIQRKDEDLLKTGKEMVQKCRGLPLCIVVLAGLLSRK--TPSEWNDVCNSLWRRL-KDDSIHVAPIVFDLSFKELRHESKLCFLY 423          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RP8HA_ARATH (Disease resistance protein RPH8A OS=Arabidopsis thaliana GN=RPH8A PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.914e-24
Identity = 74/235 (31.49%), Postives = 124/235 (52.77%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXX---ELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGS-ILG----SDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            +F++D ++ HF   AWV V +++ +  + + +++E      QP   EI +M+E  +   L   L+   Y+VV DDVWK + W  ++ A+   K+  ++++T+R+  V     +           L P E+WKL C +               E++ + ++++  C GLPLA+ A+GGLL+ K+  V EWK++ D +GS I+G     D  L    R+LS  Y DLP HLK C L+
Sbjct:  205 VFHHDLVRRHFDGFAWVCVSQQFTQKHVWQRILQEL-----QPHDGEILQMDEYTIQGKLFQLLETGRYLVVLDDVWKKEDWDRIK-AVFPRKRGWKMLLTSRNEGVG--IHADPTCLTFRASILNPEESWKL-CERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKH-TVPEWKRVSDNIGSQIVGGSCLDDNSLNSVYRILSLSYEDLPTHLKHCFLH 429          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RP8L4_ARATH (Probable disease resistance RPP8-like protein 4 OS=Arabidopsis thaliana GN=RPP8L4 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.889e-23
Identity = 74/235 (31.49%), Postives = 122/235 (51.91%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXX---ELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGS-ILG----SDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            +F++D ++ HF   AWV V +++    + + +++E      QP    I +M+E  L   L   L+   Y++V DDVWK + W  ++ A+   K+  ++++T+R+  V     +           L P E+WKL C +               E++ + ++++  C GLPLA+ A+GGLL+ K+  V EWK++ D +GS I+G     D  L   NR+LS  Y DLP HLK   LY
Sbjct:  205 VFHHDLVRRHFDGFAWVCVSQQFTLKHVWQRILQEL-----QPHDGNILQMDESALQPKLFQLLETGRYLLVLDDVWKKEDWDRIK-AVFPRKRGWKMLLTSRNEGVG--IHADPTCLTFRASILNPEESWKL-CERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKH-TVPEWKRVSDNIGSQIVGGSCLDDNSLNSVNRILSLSYEDLPTHLKHRFLY 429          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1C3_SOLDE (Putative late blight resistance protein homolog R1C-3 OS=Solanum demissum GN=R1C-3 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.889e-23
Identity = 76/267 (28.46%), Postives = 127/267 (47.57%), Query Frame = 2
Query:   11 IESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            IE++++KL+    NG   +                   L+++  + + F   A   V + Y+  +LL  ++++        T +  +++ +M     LR  L  + Y+++ DDVW+   W D+     D     RII+TTRH  VAK A   S P+H+   + +   E+WKL  +K             L+++ Q I   C  LPL+IV V G+LS   + V  W+++ + LG+ + +     D   V+ + YH LP HLKSC LYF
Sbjct:  517 IETLRKKLL----NGTKGQDVISMHGMPGLGKTTLANRLYSDRSVVSQFDICAQCCVSQVYSYKDLLLALLRDAIGEGSVRTELHANELADM-----LRKTLLPRRYLILVDDVWENSVWDDLSGCFPDVNNRSRIILTTRHHEVAKYASVHSDPLHLRMFDEV---ESWKLLEKKVFGEESCSPL---LRDIGQRIAKMCGQLPLSIVLVAGILSEMEKEVEYWEQVANNLGTHIHN-----DSRAVVDQSYHVLPCHLKSCFLYF 763          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RP8L1_ARATH (Putative disease resistance protein RPP8-like protein 1 OS=Arabidopsis thaliana GN=RPP8L1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.467e-23
Identity = 71/231 (30.74%), Postives = 120/231 (51.95%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGS----DPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            +F++D ++ HF   AWV V +++ +  + + + +E      QP   +I  M+E  L   L   L+   Y+VV DDVWK + W  ++ A+   K+  ++++T+R+  V       S     +   L P E+WKL  +             +++ + ++++  C GLPLA+  +GGLL+TK+  V EWK+++D +G  L      D +L    RVLS  Y +LP  LK C LY
Sbjct:  180 VFHHDMVQRHFDGFAWVFVSQQFTQKHVWQRIWQEL-----QPQNGDISHMDEHILQGKLFKLLETGRYLVVLDDVWKEEDWDRIK-AVFPRKRGWKMLLTSRNEGVGIHADPKS--FGFKTRILTPEESWKLCEKIVFHRRDETGTLSDMEAMGKEMVTCCGGLPLAVKVLGGLLATKH-TVPEWKRVYDNIGPHLAGRSSLDDNLNSIYRVLSLSYENLPMCLKHCFLY 401          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B23_SOLDE (Putative late blight resistance protein homolog R1B-23 OS=Solanum demissum GN=R1B-23 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.221e-23
Identity = 76/267 (28.46%), Postives = 127/267 (47.57%), Query Frame = 2
Query:   11 IESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            IE++++KL+    NG   +                   L+++  + + F   A   V + Y+  +LL  ++++        T +  +++ +M     LR  L  + Y+++ DDVW+   W D+     D     RII+TTRH  VAK A   S P+H+   + +   E+WKL  +K             L+++ Q I   C  LPL+IV V G+LS   + V  W+++ + LG+ + +     D   V+ + YH LP HLKSC LYF
Sbjct:  487 IETLRKKLL----NGTKGQDVISMHGMPGLGKTTLANRLYSDRSVVSQFDICAQCCVSQVYSYKDLLLALLRDAIGEGSVRTELHANELADM-----LRKTLLPRRYLILVDDVWENSVWDDLSGCFPDVNNRSRIILTTRHHEVAKYASVHSDPLHLRMFDEV---ESWKLLEKKVFGEESCSPL---LRDIGQRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGTHIHN-----DSRAVVDQSYHVLPCHLKSCFLYF 733          
The following BLAST results are available for this feature:
BLAST of CV712486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
RPM1_ARATH2.455e-3934.19Disease resistance protein RPM1 OS=Arabidopsis tha... [more]
R13L4_ARATH6.272e-2731.00Disease resistance RPP13-like protein 4 OS=Arabido... [more]
R13L3_ARATH9.057e-2634.63Putative disease resistance RPP13-like protein 3 O... [more]
RPP8_ARATH2.018e-2532.91Disease resistance protein RPP8 OS=Arabidopsis tha... [more]
RPP13_ARATH1.308e-2433.04Disease resistance protein RPP13 OS=Arabidopsis th... [more]
RP8HA_ARATH2.914e-2431.49Disease resistance protein RPH8A OS=Arabidopsis th... [more]
RP8L4_ARATH1.889e-2331.49Probable disease resistance RPP8-like protein 4 OS... [more]
R1C3_SOLDE1.889e-2328.46Putative late blight resistance protein homolog R1... [more]
RP8L1_ARATH2.467e-2330.74Putative disease resistance protein RPP8-like prot... [more]
R1B23_SOLDE3.221e-2328.46Putative late blight resistance protein homolog R1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001H08_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712486 ID=CV712486; Name=CV712486; organism=Citrus sinensis; type=EST; length=810bp
GTTGTGGGGGATCGAATCCATTAAACGTAAATTGATTGATTTGATGGTGA
ACGGAAGATCCGAACGTTCAGTGGTTGCTGTGGTGGGTGTAGGAGGGCTA
GGCAAGACCACTCTTGCTGGAAAACTTTTTAACAATGATGGTTTAAAAAC
TCACTTCAGTAGCCGGGCTTGGGTCACCGTTGGGAAAGAATACAACAAAA
ATGAATTGTTGAGGACAGTTATAAAGGAGTTTCACAGTTTCTCAGGGCAG
CCTACTCCAGTCGAGATACACAAAATGGAAGAGATGGAGCTGATCACCAC
GCTGAGGGGCCACTTGAAGGACAAGAATTACATGGTTGTGTTCGACGATG
TTTGGAAGATTGATTTTTGGGGAGACGTGGAGCATGCTTTACTTGATAAC
AAGAAATGCGGCAGGATAATTGTCACAACACGGCACATGAATGTCGCTAA
GGCTTGCAAATCATCTTCCCCTGTTCATATCCATGAGCTTGAAACTTTGC
CTCCGAATGAAGCGTGGAAACTTTTTTGTAGAAAGGCTTCCGGACCAAGC
TCCGGAGGCTGTTGTCCTTCAGAGTTGAAGGAGTTGTCCCAGGACATCCT
TGGAAAATGTGAAGGTTTGCCTCTTGCTATCGTGGCCGTAGGTGGACTTC
TTTCAACCAAGAACAGGGTTGTATCTGAATGGAAGAAATTATTTGATCGG
TTGGGCTCAATCTTAGGAAGTGATCCCCATCTAAAAGACTGCAACAGAGT
TTTATCTGAAGGATATCATGATCTTCCTCACCATCTCAAATCATGTCTTC
TGTACTTTGG
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