CV712465

Overview
NameCV712465
Unique NameCV712465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11766 contig Csv1_Contig11766:38..778. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: MECR_ARATH (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Arabidopsis thaliana GN=At3g45770 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.451e-74
Identity = 133/184 (72.28%), Postives = 149/184 (80.98%), Query Frame = 3
Query:  159 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 710
            FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIEGVYPVRP VP                     +PGDWVIPSPPSSGTWQ+YVVK++SVWHKI K+ PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +IN+IRDR
Sbjct:   37 FSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIEGVYPVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHKIDKECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGISTINLIRDR 220          
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: MECR_RAT (Trans-2-enoyl-CoA reductase, mitochondrial OS=Rattus norvegicus GN=Mecr PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.418e-35
Identity = 83/185 (44.86%), Postives = 109/185 (58.92%), Query Frame = 3
Query:  159 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 710
            +SA   P   +A+VY   G P  VI++  L    V+ +DV VKMLAAPINPSDIN I+G Y + PK+P                  + L PGDWVIP+    GTW++  V  +     + KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN+IRDR
Sbjct:   34 YSAFSEPSHVRALVYGNHGDPAKVIQLKNLELTAVEGSDVHVKMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSGLKPGDWVIPANAGLGTWRTEAVFSEEALIGVPKDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALGLKTINVIRDR 218          
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: MECR_HUMAN (Trans-2-enoyl-CoA reductase, mitochondrial OS=Homo sapiens GN=MECR PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.124e-35
Identity = 80/185 (43.24%), Postives = 109/185 (58.92%), Query Frame = 3
Query:  159 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 710
            +SA   P   +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G Y + P++P                  T L PGDWVIP+    GTW++  V  +    ++  D P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN++RDR
Sbjct:   34 YSASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 218          
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: MECR_MOUSE (Trans-2-enoyl-CoA reductase, mitochondrial OS=Mus musculus GN=Mecr PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 9.188e-35
Identity = 81/185 (43.78%), Postives = 109/185 (58.92%), Query Frame = 3
Query:  159 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 710
            +SAL  P   +A+VY   G P  V+++  L    V+ +DV V+MLAAPINPSDIN I+G Y + PK+P                  + L PGDWVIP+    GTW++  V  +     I KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA    + +IN++RDR
Sbjct:   34 YSALSEPSRVRALVYGNHGDPAKVVQLKNLELTAVEGSDVHVRMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSALKPGDWVIPANAGLGTWRTEAVFSEEALIGIPKDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALRLKTINVVRDR 218          
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: MECR_BOVIN (Trans-2-enoyl-CoA reductase, mitochondrial OS=Bos taurus GN=MECR PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.733e-33
Identity = 80/184 (43.48%), Postives = 106/184 (57.61%), Query Frame = 3
Query:  159 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 707
            FSA   P   +A+VY   G P  V+++  L    V  + V VKMLAAPINPSDIN I+G Y + P++P                  T + PGDWVIP+ P  GTW++  V  +     +  D P++ AAT+ VNP TA RML DF  L   DSI+QN + S VGQ +IQIA  RG+ +IN++RD
Sbjct:   34 FSASAEPSRVRALVYGHHGDPAKVVELKNLELAAVGGSHVHVKMLAAPINPSDINMIQGNYGLLPQLPAVGGNEGVGQVVAVGSGVTGVKPGDWVIPANPGLGTWRTEAVFGEEELITVPSDIPLQSAATLGVNPCTAYRMLVDFERLRPRDSIIQNASNSGVGQAVIQIAAARGLRTINVLRD 217          
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: MECR_DANRE (Trans-2-enoyl-CoA reductase, mitochondrial OS=Danio rerio GN=mecr PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.956e-33
Identity = 75/174 (43.10%), Postives = 100/174 (57.47%), Query Frame = 3
Query:  189 AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 710
            A++Y   G P  V+++  L   +V    V VKMLAAPINPSD+N ++G Y + P++P                    L  GDWVIP     GTW++  V        + KD P+  AAT+ VNP TA RML DF  L +GD+++QN A S VGQ +IQIA  +GIH+IN+IRDR
Sbjct:   47 ALLYRNHGEPSQVVQLESLDLPQVGAECVLVKMLAAPINPSDLNMLQGTYAILPELPAVGGNEGVAQVMEVGDKVKTLKVGDWVIPKDAGIGTWRTAAVLKADDLVTLPKDIPVLSAATLGVNPCTAYRMLTDFEELKAGDTVIQNAANSGVGQAVIQIAAAKGIHTINVIRDR 220          
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: MECR_DROME (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Drosophila melanogaster GN=CG16935 PE=3 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 9.508e-32
Identity = 75/184 (40.76%), Postives = 104/184 (56.52%), Query Frame = 3
Query:  159 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 710
            +S  MS  +K++ Y + G P  V++++E    + K+N V VK+LAAPINP+DIN I+G YPV+PK P                       G  VIP     GTW ++ V  +     +SK   +  AAT  VNP TA RML+DF  L  GD+++QNGA S VGQ + Q+ R  GI+S+ I+RDR
Sbjct:   15 WSRQMSVVAKSLKYTQHGEPQEVLQLVEDKLPDPKDNQVLVKILAAPINPADINTIQGKYPVKPKFPAVGGNECVAEVICVGDKVKGFEAGQHVIPLASGLGTWTTHAVYKEDQLLIVSKKVGLAEAATSTVNPTTAYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQLCRAWGINSVGIVRDR 198          
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: MECR1_CAEEL (Probable trans-2-enoyl-CoA reductase 1, mitochondrial OS=Caenorhabditis elegans GN=W09H1.5 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.421e-27
Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 3
Query:  183 SKAVVYEREGPPDSVIKMIELPPVEVKEND-VCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 710
            ++ +VYE    P   I++  +   +    D V V+ +AAPINP+D+N+I+GVYPV+P +P                  + +  GD VIP     GTW+   +  ++    I     MEYAAT  VNP TA RML+DF  L  GD++ QNGA S VG+ +IQI R  GI ++N++R R
Sbjct:   17 TRQLVYEGYRNPPEAIQLKTVTIADKPSADQVLVQWIAAPINPADLNQIQGVYPVKPALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLSMEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQNGANSAVGKHVIQICRILGIKTVNVVRSR 193          
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: MECR_DICDI (Trans-2-enoyl-CoA reductase, mitochondrial OS=Dictyostelium discoideum GN=mecr PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 66/177 (37.29%), Postives = 94/177 (53.11%), Query Frame = 3
Query:  183 SKAVVYEREGPPDSVIKMI-ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSS-GTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 707
            S++V     G P + +K+  E    ++   DV V+ML APINP+D+N I+G Y    +V                   T L   D V+PS     G+W+S  V  +    K+  D P EY +TI +NP TA  +L DF  L  GD I+QN + S+VG  +IQ+A+ RGI +IN+IRD
Sbjct:   17 SRSVKIASHGSPSTALKIENENITDKISNKDVLVEMLHAPINPADLNIIQGTYGTNVQVGGVAGMEGVGVVKKVGSGVTGLKENDLVVPSMKQHFGSWRSKGVWSEQQLFKVPSDIPTEYLSTISINPTTAYLLLNDFVKLQQGDVIIQNASNSMVGLSVIQLAKARGIKTINVIRD 193          
BLAST of CV712465 vs. ExPASy Swiss-Prot
Match: ETR1_YARLI (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Yarrowia lipolytica GN=ETR1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.621e-23
Identity = 70/192 (36.46%), Postives = 97/192 (50.52%), Query Frame = 3
Query:  159 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP-VRPK------VPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKI-SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 710
            F    +   +A V+ + G P  VI+++E P  +  EN V +K L   INP+DIN++EGVYP V PK                          + L  GDWV+P     GTW+S+ + +     KI + D     A T+ VNP TA  ML+D   L  GD  +QNG  S VG+  IQI   RG+ SI+++RDR
Sbjct:   20 FGLRFNSVGRAFVFSQTGEPKDVIQVLEYPIEKPLENQVLLKSLGFTINPADINQLEGVYPSVPPKSVQINNEDAAIGGNEGLFQVLDPGAKSGLKKGDWVLPRKTCFGTWRSHALVEADTVVKIDNTDLTKVQATTVSVNPSTAYEMLKD---LKEGDWFIQNGGNSGVGRAAIQIGHIRGLKSISVVRDR 208          
The following BLAST results are available for this feature:
BLAST of CV712465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
MECR_ARATH3.451e-7472.28Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
MECR_RAT1.418e-3544.86Trans-2-enoyl-CoA reductase, mitochondrial OS=Ratt... [more]
MECR_HUMAN4.124e-3543.24Trans-2-enoyl-CoA reductase, mitochondrial OS=Homo... [more]
MECR_MOUSE9.188e-3543.78Trans-2-enoyl-CoA reductase, mitochondrial OS=Mus ... [more]
MECR_BOVIN1.733e-3343.48Trans-2-enoyl-CoA reductase, mitochondrial OS=Bos ... [more]
MECR_DANRE2.956e-3343.10Trans-2-enoyl-CoA reductase, mitochondrial OS=Dani... [more]
MECR_DROME9.508e-3240.76Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
MECR1_CAEEL1.421e-2738.42Probable trans-2-enoyl-CoA reductase 1, mitochondr... [more]
MECR_DICDI3.275e-2437.29Trans-2-enoyl-CoA reductase, mitochondrial OS=Dict... [more]
ETR1_YARLI3.621e-2336.46Probable trans-2-enoyl-CoA reductase, mitochondria... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001G19_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712465 ID=CV712465; Name=CV712465; organism=Citrus sinensis; type=EST; length=741bp
GGCGACGAGGGCAACTTNTGCCTGCGCTAACCAAACTGGAAAGATCAAAG
ATGGCATTGGCAAGATCAGTGGCGCTAAAACTGATAAACAGATCAATTTC
AGCAGCAAGTATCGAATGGGCCCGTGCTCGTCGGGTCCAAGCCCAACGAG
TTCGGGCCTTCTCGGCTCTAATGTCGCCGCCGTCAAAGGCTGTCGTCTAC
GAGCGGGAGGGCCCGCCCGACTCAGTCATCAAAATGATAGAGTTACCGCC
GGTGGAAGTGAAAGAGAATGACGTGTGCGTTAAAATGTTAGCTGCTCCTA
TCAACCCTTCTGATATCAATCGCATTGAAGGGGTGTACCCGGTGAGGCCA
AAAGTGCCAGCAGTTGGAGGGTATGAGGGTGTTGGAGAGGTGTATTCTGT
CGGCTCTGCAGTTACGAGACTGGCCCCCGGTGATTGGGTCATCCCCTCTC
CACCCTCATCAGGAACATGGCAGAGTTATGTTGTGAAAGATCAGAGTGTC
TGGCACAAAATTAGTAAAGATTCACCTATGGAGTATGCTGCTACCATTAT
TGTTAATCCTTTGACTGCTTTAAGAATGCTTGAAGACTTCACAACTCTAA
ATTCAGGAGATTCTATCGTCCAAAATGGTGCAACAAGCATTGTGGGGCAG
TGCATAATTCAGATTGCAAGACATCGTGGCATCCATAGCATTAATATTAT
AAGGGATAGGTATTACATGGGAGCTGAGTATTACTTGAGCT
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