CV712407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_CITSI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Citrus sinensis GN=ndhH PE=3 SV=1) HSP 1 Score: 496.123 bits (1276), Expect = 9.064e-140 Identity = 241/255 (94.51%), Postives = 242/255 (94.90%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 ELVYDL +AATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFL EAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 141 ELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 395
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_CARPA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Carica papaya GN=ndhH PE=3 SV=1) HSP 1 Score: 476.863 bits (1226), Expect = 5.690e-134 Identity = 230/255 (90.20%), Postives = 236/255 (92.55%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 ELVYDL +AATGMRMMHNYFRIGG+AADLP+GWIDKCLDFCDYFLTGVAEYQKLITRNPIFL EAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRI EMTES+KIIQQALEGIPGGPYENLEIRCFDR+ DPE NDF+ RFISKKPSPTFEL KQELY RVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 139 ELVYDLFEAATGMRMMHNYFRIGGIAADLPHGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRISEMTESIKIIQQALEGIPGGPYENLEIRCFDRKKDPEWNDFDYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_GOSHI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Gossypium hirsutum GN=ndhH PE=3 SV=1) HSP 1 Score: 476.093 bits (1224), Expect = 9.706e-134 Identity = 228/255 (89.41%), Postives = 236/255 (92.55%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 ELVYDL +AATGMRMMHNYFRIGGVAADLPYGW+DKCLDFCDYFLTG+ EYQKLITRNPIFL EAINWGLSGPMLRASGI+WDLRKVDHYECYDEFDWE+QWQKEGDSLARYLVRI EMTES+KIIQQALEGIPGGPYENLEIRCFDRE DPE NDFE RFISKKPSPTFEL +QELYAR+EAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 139 ELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWLDKCLDFCDYFLTGIVEYQKLITRNPIFLERVEGIGVIGGEEAINWGLSGPMLRASGIKWDLRKVDHYECYDEFDWEIQWQKEGDSLARYLVRISEMTESIKIIQQALEGIPGGPYENLEIRCFDRERDPEWNDFEYRFISKKPSPTFELPRQELYARMEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_GOSBA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Gossypium barbadense GN=ndhH PE=3 SV=1) HSP 1 Score: 473.011 bits (1216), Expect = 8.217e-133 Identity = 227/255 (89.02%), Postives = 235/255 (92.16%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 ELVYDL +AATGMRMMHNYFRIGGVAADLPYGW+DKCLDFCDYFLTG+ EYQKLITRNPIFL EAINWGLSGPMLRASGI+WDLRKVDHYECYDEFDWE+QWQKEGDSLARYLVRI EMTES+KIIQQALEGIPGGPYENLEIRCFDRE DPE NDFE RFIS KPSPTFEL +QELYAR+EAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 139 ELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWLDKCLDFCDYFLTGIVEYQKLITRNPIFLERVEGIGVIGGEEAINWGLSGPMLRASGIKWDLRKVDHYECYDEFDWEIQWQKEGDSLARYLVRISEMTESIKIIQQALEGIPGGPYENLEIRCFDRERDPEWNDFEYRFISIKPSPTFELPRQELYARMEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_VITVI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Vitis vinifera GN=ndhH PE=3 SV=1) HSP 1 Score: 469.544 bits (1207), Expect = 9.085e-132 Identity = 227/255 (89.02%), Postives = 234/255 (91.76%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 ELVYDL +AATGMRMMHNYFRIGGVAADLP+GWIDKCLDFCDYFLTGVAEYQKLITRNPIFL EAINWGLSGPMLRASGI+WDLRKVDHYECYDEFDWEVQWQKEGDSL+RYLVRIGEM S+KIIQQALEGIPGGPYENLEIRCFDR DPE NDFE RFISKKPSPTFEL+KQELY RVEAPKGELGIFLIGDQ+ FPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 139 ELVYDLFEAATGMRMMHNYFRIGGVAADLPHGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGVEEAINWGLSGPMLRASGIQWDLRKVDHYECYDEFDWEVQWQKEGDSLSRYLVRIGEMVASIKIIQQALEGIPGGPYENLEIRCFDRARDPELNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQNVFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_TOBAC (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Nicotiana tabacum GN=ndhH PE=3 SV=1) HSP 1 Score: 466.463 bits (1199), Expect = 7.691e-131 Identity = 227/255 (89.02%), Postives = 234/255 (91.76%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 EL+YDL +AATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFL EA+NWGLSGPMLRASGIEWDLRKVDHYE YDEFDW+VQWQ+EGDSLARYLVRIGEMTES+KIIQQALEGIPGGPYENLEIR FDR DPE NDFE RFISKKPSPTFEL+KQELY RVEAPKGELGIFLIGDQS FPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 139 ELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGGDEALNWGLSGPMLRASGIEWDLRKVDHYESYDEFDWQVQWQREGDSLARYLVRIGEMTESIKIIQQALEGIPGGPYENLEIRRFDRLKDPEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSVFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_NICSY (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Nicotiana sylvestris GN=ndhH PE=3 SV=1) HSP 1 Score: 466.463 bits (1199), Expect = 7.691e-131 Identity = 227/255 (89.02%), Postives = 234/255 (91.76%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 EL+YDL +AATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFL EA+NWGLSGPMLRASGIEWDLRKVDHYE YDEFDW+VQWQ+EGDSLARYLVRIGEMTES+KIIQQALEGIPGGPYENLEIR FDR DPE NDFE RFISKKPSPTFEL+KQELY RVEAPKGELGIFLIGDQS FPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 139 ELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGGDEALNWGLSGPMLRASGIEWDLRKVDHYESYDEFDWQVQWQREGDSLARYLVRIGEMTESIKIIQQALEGIPGGPYENLEIRRFDRLKDPEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSVFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_MORIN (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Morus indica GN=ndhH PE=3 SV=1) HSP 1 Score: 466.463 bits (1199), Expect = 7.691e-131 Identity = 226/255 (88.63%), Postives = 233/255 (91.37%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 ELVYDL +AATGMRMMHN+FRIGGVAADLP+GWIDKCLDFCDYFL GV EYQKLITRNPIFL E INWGLSGPMLRASGI+WDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTES+KIIQQALEGIPGGPYENLEIR FDRE +PE NDF+ RFISKKPSPTFEL KQELY RVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 139 ELVYDLFEAATGMRMMHNFFRIGGVAADLPHGWIDKCLDFCDYFLIGVTEYQKLITRNPIFLERVEGVGVIGREEVINWGLSGPMLRASGIQWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESIKIIQQALEGIPGGPYENLEIRYFDRERNPEWNDFDYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_EUCGG (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhH PE=3 SV=1) HSP 1 Score: 466.077 bits (1198), Expect = 1.004e-130 Identity = 226/255 (88.63%), Postives = 231/255 (90.59%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 ELVYDL +AATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLT V+EYQKLITRNPIFL EAINWGLSGPMLRASGI+WDLRKVDHYECYDE DWE+ WQKEGDSLARYLVRIGEM ES+KIIQQALEGIPGGPYENLE RCF RE DPE NDFE RFISKKPSPTFEL KQELY RVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 139 ELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTAVSEYQKLITRNPIFLERVEGVGIIGPEEAINWGLSGPMLRASGIQWDLRKVDHYECYDELDWEIFWQKEGDSLARYLVRIGEMRESIKIIQQALEGIPGGPYENLETRCFARERDPEWNDFEYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
BLAST of CV712407 vs. ExPASy Swiss-Prot
Match: NDHH_ATRBE (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Atropa belladonna GN=ndhH PE=3 SV=1) HSP 1 Score: 466.077 bits (1198), Expect = 1.004e-130 Identity = 226/255 (88.63%), Postives = 234/255 (91.76%), Query Frame = -2 Query: 29 ELVYDLSKAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLXXXXXXXXXXXXEAINWGLSGPMLRASGIEWDLRKVDHYECYDEFDWEVQWQKEGDSLARYLVRIGEMTESVKIIQQALEGIPGGPYENLEIRCFDRESDPERNDFENRFISKKPSPTFELTKQELYARVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 793 EL+YDL +AATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTG+AEYQKLITRNPIFL EA+NWGLSGPMLRASGIEWDLRKVDHYE YDEFDW+VQWQ+EGDSLARYLVRIGEMTES+KIIQQALEGIPGGPYENLEIR FDR DPE NDFE RFISKKPSPTFEL+KQELY RVEAPKGELGIFLIGDQS FPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR Sbjct: 139 ELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGIAEYQKLITRNPIFLERVEGVGIIGGDEALNWGLSGPMLRASGIEWDLRKVDHYESYDEFDWQVQWQREGDSLARYLVRIGEMTESIKIIQQALEGIPGGPYENLEIRRFDRLKDPEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSVFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393 The following BLAST results are available for this feature:
BLAST of CV712407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712407 ID=CV712407; Name=CV712407; organism=Citrus sinensis; type=EST; length=794bpback to top |