CV712384

Overview
NameCV712384
Unique NameCV712384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9019 contig Csv1_Contig9019:126..803. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.298e-31
Identity = 60/108 (55.56%), Postives = 84/108 (77.78%), Query Frame = 1
Query:  352 LHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDE 675
            +H LA G PH V+  L  KYGP+M L+LG++ AV+++SPE AK+VLKT++I FA RP++ A++I+ Y+   I F+PYGDYWR+MRKI ++E+LS K V+SF SIR DE
Sbjct:   44 MHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDE 151          
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.037e-31
Identity = 60/109 (55.05%), Postives = 86/109 (78.90%), Query Frame = 1
Query:  349 NLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDE 675
            ++H LA G+PH V+  L +KYGP+M L+LG++ AV+++SP+ AKEVLKT++I FA RP++ A++I+ YD   I F+PYG+YW++MRKI V E+LS K V+SF SIR DE
Sbjct:   43 SMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDE 151          
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30
Identity = 58/110 (52.73%), Postives = 86/110 (78.18%), Query Frame = 1
Query:  349 NLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRP-EVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDE 675
            N HQL+ G  HH++  L +KYGP+M LK+G++  ++ SSP+ A+E+ +T++I FA RP  + + +I+SYD S +V +PYG+YWR++RKIS++ELLS K VQSFRSIRE+E
Sbjct:   38 NAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEE 147          
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.959e-29
Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = 1
Query:  349 NLHQLADGQ-PHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIRED 672
            N+H L     PHH +  L  KYG +M LKLG++  +++SSPE AKEV+KT++  FA RP V A EIM YD   + F PYGDYWR++RKI  LELLS+KRVQSF+ IRE+
Sbjct:   47 NMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREE 155          
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.884e-28
Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 1
Query:  349 NLHQLA--DGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDE 675
            NLHQLA     P   + KL RKYGP+M L+LG++  +++SSP+ A E++KT+++ F QRP++ A + M Y  + I FAPYGDYWR++RKI  LELLS KRVQSF  IR+DE
Sbjct:   45 NLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDE 155          
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.221e-27
Identity = 56/110 (50.91%), Postives = 83/110 (75.45%), Query Frame = 1
Query:  349 NLHQLADGQP-HHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDE 675
            N+HQ+    P H+ +  L  KYGP+M LKLG++  +I++SPE A+E++KT+++ F+ RP+     I+SY+ S IVF+ +GDYWR++RKI  +ELL+ KRVQSFRSIRE+E
Sbjct:   55 NIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEE 164          
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.062e-27
Identity = 57/133 (42.86%), Postives = 82/133 (61.65%), Query Frame = 1
Query:  277 IRYWKNSNXXXXXXXXXXXXXXXXNLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDE 675
            ++ W+ S                 NLHQL    PH  +  L R+YGPVM+L  G +  ++ SSPEAA+E++K  ++ F+ RP +     + YD+  + FAPYG+YWR++R I VL+LLSNKRVQSFR +RE+E
Sbjct:   15 LKKWRRSYSGKTPPPSPPKLPVLGNLHQLGTF-PHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEE 146          
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = 1
Query:  349 NLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDE 675
            NLH LA G PH    KL  KYGP++ L+LG +  V+ISS EAA+ VLKTN+++   RP+      +SY    I FAPYG+YWRE+RK++V+EL S+K+VQSFR IRE+E
Sbjct:   43 NLHHLA-GLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEE 150          
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.816e-24
Identity = 54/109 (49.54%), Postives = 77/109 (70.64%), Query Frame = 1
Query:  349 NLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDE 675
            NLHQL +  PH  +  L  + GP++ L LG +  +I+S+ E A+E+LKT+++ FA RP   A   + YD + + F+PYG+YWR++RKI VLELLS KRV S+RSIRE+E
Sbjct:   43 NLHQLGN-LPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEE 150          
BLAST of CV712384 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.070e-23
Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 1
Query:  349 NLHQLADGQPHHVMTKLCRKYGPVMKLKLGQLDAVIISSPEAAKEVLKTNEIKFAQRPEVYAVEIMSYDHSSIVFAPYGDYWREMRKISVLELLSNKRVQSFRSIREDE 675
            ++  L    PH  +  L +KYGP+M L+LG++  +I+SS E AKEV+KT+++ FA RP     +I+ Y  + I F+PYGDYWR++RKI  +ELLS KRVQS   IRE+E
Sbjct:   31 SIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEE 139          
The following BLAST results are available for this feature:
BLAST of CV712384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
C71D7_SOLCH5.298e-3155.56Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71D6_SOLCH9.037e-3155.05Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71DC_CATRO7.650e-3052.73Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71D9_SOYBN4.959e-2955.96Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71D8_SOYBN1.884e-2854.05Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71DA_SOYBN1.221e-2750.91Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71A6_NEPRA6.062e-2742.86Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71B2_ARATH2.303e-2654.13Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71A1_PERAE2.816e-2449.54Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71DB_LOTJA1.070e-2348.62Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001E24_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712384 ID=CV712384; Name=CV712384; organism=Citrus sinensis; type=EST; length=678bp
CCCCGTTTTTTTTGGCTACAATATTAAATTATTTATTGATCTAATTGGGG
TATACAGTGTCCCCATAACGCTAATGATCTTAACTTTCTAGTTTTTACAA
TAAATTCACAACTTCAGTTTTATGTTTGTCCTTGCAGTGGCCAAAAGCAC
ATACAGAATCTAAAAGAATTTCTGAAAGCACAATCATCAATGGACATTAC
TACTACAGCAACCCAAATGCTTCATTTGCCATCTCTTCCTGTTCTCTTAT
CTTTTCTCCTCTTCTTGTTGATGCTTATTAGATATTGGAAGAATTCCAAT
GGACAAGGCAAGCAGCCTCCCGGGCCAAAACCGCTGCCGATTCTGGGGAA
CTTGCATCAGTTGGCTGATGGTCAGCCACACCATGTTATGACAAAACTAT
GCAGGAAATATGGTCCTGTCATGAAACTAAAACTTGGCCAGCTTGATGCT
GTGATCATTTCATCACCTGAAGCTGCCAAAGAGGTGCTGAAAACAAATGA
GATCAAGTTTGCACAGAGGCCTGAAGTTTATGCTGTCGAAATCATGTCAT
ATGATCATTCAAGTATCGTGTTTGCTCCCTATGGTGATTACTGGAGAGAA
ATGAGGAAGATATCGGTCTTGGAGCTTTTGAGTAACAAGCGTGTCCAGTC
ATTCAGATCGATAAGAGAAGATGAGCCT
back to top