CV712382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: PAO4_ARATH (Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1 SV=1) HSP 1 Score: 390.193 bits (1001), Expect = 8.426e-108 Identity = 192/267 (71.91%), Postives = 225/267 (84.27%), Query Frame = -1 Query: 100 VIKALSKDIDIRXNQRVTKI-SNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQPGNLEKLQLVTL--SHEILGTA-FPLQISRM 888 VI+ ++KD+DIR N RVTK+ NKV+V VE G NFVADA I+TVP+G+LKANLIQFEP+LP+WK SAI+ +GVGNENKIALRFD FWPNVE LG+VAPTSYACGYFLNLHKATGHPVLVYMAAG A DLEKLSDE+ ANFVM+QLKKMFPDA +P QYLV+RWGTD NTLGCY+YDVVGMP DLY RL P+ N+FFGGEAV++EHQGS HGA+ AGV A+QNCQ+Y+ ++ G EKL+LV+L + +IL TA PLQISRM Sbjct: 231 VIRTIAKDLDIRLNHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLKANLIQFEPELPQWKTSAISGLGVGNENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVLVYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDVVGMPEDLYPRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQNCQRYIFERLGAWEKLKLVSLMGNSDILETATVPLQISRM 497
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: PAO2_ARATH (Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.494e-88 Identity = 162/263 (61.60%), Postives = 197/263 (74.90%), Query Frame = -1 Query: 100 VIKALSKDIDIRXNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQPGNLEKLQLVTLSHEILGTAFPLQISRM 888 VI L+K +DIR RVTKI N V VT E+G+ FVADAA++ VPLG+LK+ I+FEPKLPEWK AI D+GVG ENKI L F+ VFWP VE LGVVA TSY C YFLNLHKATGHPVLVYM AG+ A D+EK+SDE+AANF ++QL+++ PDA PVQYLVSRWG+D N++G YSYD+VG P DLYERLR P+ NLFF GEA S GSVHGAYS G+MAA++C+ +L++ G L+ Q V E + PL ISR+ Sbjct: 230 VINTLAKGLDIRVGHRVTKIVRRYNGVKVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPEWKQEAINDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFLNLHKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDNLFFAGEATSSSFPGSVHGAYSTGLMAAEDCRMRVLERYGELDLFQPV--MGEEGPASVPLLISRL 490
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: PAO3_ARATH (Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.549e-88 Identity = 162/263 (61.60%), Postives = 193/263 (73.38%), Query Frame = -1 Query: 100 VIKALSKDIDIRXNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQPGNLEKLQLVTLSHEILGTAFPLQISRM 888 VI LSK +DIR + R+TKIS + V VT E G FVADAA++ +PLG+LK+ +I FEPKLP+WK AI D+GVG ENKI L FDNVFWPNVE LGVVA TSY C YFLNLHKAT HPVLVYM AG+ A D+EK SDE+AANF QL+K+ PDA+ P+ YLVSRWG+D N+LG YSYD+V P DLYERLR PL NLFF GEA S + GSVHGAYS GV+AA++C+ +L++ G LE E + PL ISRM Sbjct: 231 VINTLSKGLDIRLSHRITKISRRYSGVKVTTEKGDTFVADAAVIALPLGVLKSGMITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFWPNVEFLGVVAETSYGCSYFLNLHKATSHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSDINSLGSYSYDIVNKPHDLYERLRVPLDNLFFAGEATSSSYPGSVHGAYSTGVLAAEDCRMRVLERYGELEHEM-----EEEAPASVPLLISRM 488
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: LSDA_DROME (Possible lysine-specific histone demethylase 1 OS=Drosophila melanogaster GN=Su(var)3-3 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.193e-31 Identity = 89/263 (33.84%), Postives = 130/263 (49.43%), Query Frame = -1 Query: 181 ALSKDIDIRXNQRVTKISNGCNKVMVTVEDGRN------FVADAAIVTVPLGILK----------ANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDAT--EPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERLRAP-----------LGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQP 879 AL++++DIR N V +I G V V E+ + + AD + T+ LG+LK +N ++F+P LP+WK AI +G GN NK+ L FD +FW PN L G V T+ + G + PVL+ + AG A +E ++D+ M LK +F + + +P + +V+RW +D G YSY VG G Y+ L AP L LFF GE + +VHGAY +G+ A Y L P Sbjct: 570 ALTENLDIRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTASRGEMFLFWSISSSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLPRLFFAGEHTIRNYPATVHGAYLSGLREAGRIADYYLGYP 832
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: LDL3_ORYSI (Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. indica GN=B0103C08-B0602B01.13 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.193e-31 Identity = 82/237 (34.60%), Postives = 138/237 (58.23%), Query Frame = -1 Query: 208 VIKALSKDIDIRXNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLG-VVAPTSYACGYFLNLHKAT--GHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFP----DATEPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERLRAPLGN--LFFGGEAVSMEHQGSVHGAYSAGVMAAQN 888 +++AL++++ I + V I NG + V V V G+ + D A+ TVPLG+LK ++F P+LP+ KL +I +G G NK+A+ F +VFW +++ G + S+ +FL AT G P+L+ + AG A++ E A + V+ L+ ++ + +P+Q + +RWGTD+ +LG YS+ VG GD Y+ L +G+ LFF GEA + + ++HGA+ +G+ A N Sbjct: 396 LVQALAENVPIVYERTVHTIRNGGDGVQVVVNGGQVYEGDMALCTVPLGVLKNGGVKFVPELPQRKLDSIKRLGFGLLNKVAMLFPHVFWSTDLDTFGHLTEDPSHRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLKILRGIYEPQGIEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFISGLREAAN 632
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: LDL3_ORYSJ (Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. japonica GN=Os04g0560300 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 4.136e-30 Identity = 80/237 (33.76%), Postives = 137/237 (57.81%), Query Frame = -1 Query: 208 VIKALSKDIDIRXNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLG-VVAPTSYACGYFLNLHKAT--GHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFP----DATEPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERLRAPLGN--LFFGGEAVSMEHQGSVHGAYSAGVMAAQN 888 ++++L++++ I + V I G + V V V G+ + D A+ TVPLG+LK ++F P+LP+ KL +I +G G NK+A+ F +VFW +++ G + S+ +FL AT G P+L+ + AG A++ E A + V+ L+ ++ + +P+Q + +RWGTD+ +LG YS+ VG GD Y+ L +G+ LFF GEA + + ++HGA+ +G+ A N Sbjct: 396 LVQSLAENVPIVYERTVHTIRYGGDGVQVVVNGGQVYEGDMALCTVPLGVLKNGGVKFVPELPQRKLDSIKRLGFGLLNKVAMLFPHVFWSTDLDTFGHLTEDPSHRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLKILRGIYEPQGIEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFISGLREAAN 632
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: LDL1_ORYSJ (Lysine-specific histone demethylase 1 homolog 1 OS=Oryza sativa subsp. japonica GN=Os02g0755200 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.136e-30 Identity = 84/259 (32.43%), Postives = 132/259 (50.97%), Query Frame = -1 Query: 136 IKALSKDIDIRXNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWP-NVELLGVVAPTSYACG---YFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFP----DATEPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERL-RAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQPGNLEKLQLVTLSHEI 885 ++AL+ I I Q V +I GC+ MV D + F D + TVPLG+LK IQF P+LP K AI +G G NK+ L F FW ++ G + S G F + +G P+L+ + AG A + EK S V+ L+K+F + +P+Q + +RWGTD T G YSY +G GD Y+ L + +FF GEA + + ++HGA +G A N + ++ ++ + + +++E+ Sbjct: 478 VRALADGIPIFYGQNVRRIQYGCDGAMVYT-DKQTFRGDMVLCTVPLGVLKKGNIQFVPELPAQKREAIERLGFGLLNKVVLLFPYDFWDGRIDTFGHLTEDSGQRGEFFLFYSYSSVSGGPLLIALVAGESAIEFEKTSPAENVEKVLETLRKIFSPKGIEVPKPLQAICTRWGTDKFTYGSYSYVAIGSSGDDYDILAESVCDRVFFAGEATNRRYPATMHGALLSGYREAANIVRAARRRAKKVDSPKKMDVNNEV 735
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: KDM1_MOUSE (Lysine-specific histone demethylase 1 OS=Mus musculus GN=Kdm1 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.501e-29 Identity = 88/249 (35.34%), Postives = 130/249 (52.21%), Query Frame = -1 Query: 214 ALSKDIDIRXNQRVTKI---SNGCNKVMV-TVEDGRNFV--ADAAIVTVPLGILKAN--LIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLGVVAPTSYACG---YFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDAT--EPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERLR-------------APLGNLFFGGEAVSMEHQGSVHGAYSAGVMAA 879 AL++ +DI+ N V ++ ++GC + V T + F+ DA + T+PLG+LK +QF P LPEWK SA+ +G GN NK+ L FD VFW P+V L G V T+ + G F NL+KA P+L+ + AG A +E +SD+ + LK +F + +P + +VSRW D G YSY G G+ Y+ + P+ LFF GE + +VHGA +G+ A Sbjct: 578 ALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKA---PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREA 823
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: KDM1_HUMAN (Lysine-specific histone demethylase 1 OS=Homo sapiens GN=KDM1 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.501e-29 Identity = 88/249 (35.34%), Postives = 130/249 (52.21%), Query Frame = -1 Query: 214 ALSKDIDIRXNQRVTKI---SNGCNKVMV-TVEDGRNFV--ADAAIVTVPLGILKAN--LIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLGVVAPTSYACG---YFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDAT--EPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERLR-------------APLGNLFFGGEAVSMEHQGSVHGAYSAGVMAA 879 AL++ +DI+ N V ++ ++GC + V T + F+ DA + T+PLG+LK +QF P LPEWK SA+ +G GN NK+ L FD VFW P+V L G V T+ + G F NL+KA P+L+ + AG A +E +SD+ + LK +F + +P + +VSRW D G YSY G G+ Y+ + P+ LFF GE + +VHGA +G+ A Sbjct: 577 ALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKA---PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREA 822
BLAST of CV712382 vs. ExPASy Swiss-Prot
Match: LDL2_ORYSJ (Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica GN=Os08g0143400 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.573e-29 Identity = 81/234 (34.62%), Postives = 126/234 (53.85%), Query Frame = -1 Query: 214 VIKALSKDIDIRXNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW-PNVELLGVVAPTSYACG---YFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMF----PDATEPVQYLVSRWGTDTNTLGCYSYDVVGMPGDLYERLRAPLGN-LFFGGEAVSMEHQGSVHGAYSAGVMAA 888 ++ AL + + + V +I +G + V +TVE G+ F AD A+ T PLG+LK+ I FEP+LPE KL AI +G G NK+A+ F +VFW ++ G + G F + H +G VL+ + AG A + EK+ A + V+ LK ++ +P+Q +RWG+D G YS+ VG G Y+ L + + LFF GEA + + ++HGA +G+ A Sbjct: 359 LVHALCDGVPVLYEKTVKRIEHGEDGVSITVEGGQVFKADMALCTAPLGVLKSRSIIFEPELPERKLEAIQRLGFGLLNKVAMVFPHVFWDEEIDTFGCLNKERSKRGEFFLFYSYHTVSGGAVLIALVAGEAALEFEKVDPAVALHRVLGILKGIYGPKGVTVPDPIQSCCTRWGSDPLCSGSYSHIRVGSSGTDYDILAESVNDRLFFAGEATNRAYPATMHGALLSGLREA 592 The following BLAST results are available for this feature:
BLAST of CV712382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712382 ID=CV712382; Name=CV712382; organism=Citrus sinensis; type=EST; length=888bpback to top |