CV712367

Overview
NameCV712367
Unique NameCV712367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7517 contig Csv1_Contig7517:223..954. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 61/178 (34.27%), Postives = 88/178 (49.44%), Query Frame = -1
Query:  148 LFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 654
            LFSP+F  TT+LLW ++F N+F YYG+VLL                        S+         Y ++  T+ +E PGLL    ++DRVGRK +M I FI      L L       +LT  L  AR F  G F  A ++ PE+YPT+ R+ G G    + R+G ++ P +A  ++ S
Sbjct:  308 LFSPQFRCTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISNQRKAVKPKCSLACEYLTVEDYTDLLWTTLSEFPGLLVTLWIIDRVGRKKTMAICFIIFSFSALLLFLCVGRNVLTVFLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485          
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21
Identity = 67/212 (31.60%), Postives = 101/212 (47.64%), Query Frame = -1
Query:   49 LFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA-VGLVTSCHQTXXXXXXXXXXXXXXXXXXXIPFETKGKEL 654
            LF+P F  TT+LLW ++F N+F YYG+VLL                        S+         Y+++  T+ +E PG+L    ++DR+GRK +M + FI   +  L L       +LT LL  AR F  G F  A ++ PE+YPT+ R+ G G    + R+G ++ P +A V L +S + T                   +P ETKG+ L
Sbjct:  308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLT--LAVYSGCCLLAGVASCFLPIETKGRAL 517          
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 66/212 (31.13%), Postives = 101/212 (47.64%), Query Frame = -1
Query:   49 LFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA-VGLVTSCHQTXXXXXXXXXXXXXXXXXXXIPFETKGKEL 654
            LF+P F  TT+LLW ++F N+F YYG+VLL                        S+         Y+++  T+ +E PG+L    ++DR+GRK +M + F+   +  L L       +LT LL  AR F  G F  A ++ PE+YPT+ R+ G G    + R+G ++ P +A V L +S + T                   +P ETKG+ L
Sbjct:  308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLT--LAVYSGCCLLAALASCFLPIETKGRAL 517          
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21
Identity = 57/178 (32.02%), Postives = 89/178 (50.00%), Query Frame = -1
Query:  148 LFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 654
            LF+P F  TT+LLW ++F N+F YYG+VLL                        S+         Y+++  T+ +E PG+L    ++DR+GRK +M + F+      L L       +LT LL  AR F  G F  A ++ PE+YPT+ R+ G G    + R+G ++ P +A  ++ S
Sbjct:  308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485          
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21
Identity = 57/178 (32.02%), Postives = 89/178 (50.00%), Query Frame = -1
Query:  148 LFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 654
            LF+P F  TT+LLW ++F N+F YYG+VLL                        S+         Y+++  T+ +E PG+L    ++DR+GRK +M + F+      L L       +LT LL  AR F  G F  A ++ PE+YPT+ R+ G G    + R+G ++ P +A  ++ S
Sbjct:  308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485          
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21
Identity = 57/178 (32.02%), Postives = 89/178 (50.00%), Query Frame = -1
Query:  148 LFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 654
            LF+P F  TT+LLW ++F N+F YYG+VLL                        S+         Y+++  T+ +E PG+L    ++DR+GRK +M + F+      L L       +LT LL  AR F  G F  A ++ PE+YPT+ R+ G G    + R+G ++ P +A  ++ S
Sbjct:  308 LFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVVFSFCSLLLFICVGRNMLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485          
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = -1
Query:  166 LFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQDA------SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA 654
            L SP   KTTILLW ++   +F YYG+VL                  +    +       S Y ++  T+ AE PGL+   L+++  GRK +M + +    IF   L        +T L+  AR F  G F  A ++ PE+YPT++R+ G G   A+ RIG +V P +A
Sbjct:  310 LLSPDLRKTTILLWCIWAITAFSYYGMVLFTTVLFQSHDECHGGLFSNGTQMEVCQPLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIA 478          
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: S22A7_BOVIN (Solute carrier family 22 member 7 OS=Bos taurus GN=SLC22A7 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13
Identity = 54/171 (31.58%), Postives = 82/171 (47.95%), Query Frame = -1
Query:  163 SFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 666
            S+L LF +PR    ++   V++FG +F YYG+ L                    +    +VY+   +    ELP  L   L V   GR+L+M  T++   + + L  LV+ +     TAL    + FS   F  A +F  E+YPT +R TG G+   VGR+GG + PL A+
Sbjct:  332 SYLDLFRTPRLRYISLCCMVVWFGVNFSYYGVSL------------------DLSGLGLNVYLTQLVFGAVELPSKLLVYLSVRHAGRRLTMAGTLLGAALAVGLRILVSPEMKSWSTALAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAAL 484          
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: SVOPL_DANRE (Putative transporter SVOPL OS=Danio rerio GN=svopl PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 50/181 (27.62%), Postives = 81/181 (44.75%), Query Frame = -1
Query:  151 LFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQ-------------DASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 654
            L S  F +T++LLW  +F  SF YYG VL +                   ++             ++  Y  + I+   E+  +    +L++ VGRK SM I+ +    F + +    + +  T LL   R      F +  I+  E+YPTS+RS G G   +  RIGGM+ P +A  L++
Sbjct:  289 LISSAFRRTSLLLWYSWFVASFSYYGSVLSSSELLEKNLLCVTDPDLEHQIKHIQEETLCYCIPFNSDDYQTLLISCLGEVALIPLNIILLNIVGRKYSMVILLLLSAFFFMLVNICTTMLGFTILLFLLRSVVSMNFNVVYIYTAEVYPTSVRSIGMGFCTSFSRIGGMIAPFIAQVLMS 469          
BLAST of CV712367 vs. ExPASy Swiss-Prot
Match: S22A6_BOVIN (Solute carrier family 22 member 6 OS=Bos taurus GN=SLC22A6 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 48/187 (25.67%), Postives = 89/187 (47.59%), Query Frame = -1
Query:  163 LLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 717
            L +S +K  T  KS  S+  ++  P   +  + L +L+F  SF YYG+V+                         S+Y+   I    +LP  L + L+++ VGR+ +   +++   +CI +  +V    +I+ T+L    +     +F    ++  E+YPT +R TG G+   + R+G +V PLV++
Sbjct:  309 LQASLKKELTTGKSQASALELIRCPALRRLFLCLSMLWFATSFAYYGLVMDLQGFG------------------VSIYLIQVIFGAVDLPAKLVSFLVINNVGRRPAQMASLLLAGICILINGVVPKDKSIVRTSLAVLGKGCLASSFNCIFLYTGEVYPTMIRQTGLGMGSTLARVGSIVSPLVSM 477          
The following BLAST results are available for this feature:
BLAST of CV712367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
SVOP_XENLA3.019e-2234.27Synaptic vesicle 2-related protein OS=Xenopus laev... [more]
SVOP_MOUSE1.957e-2131.60Synaptic vesicle 2-related protein OS=Mus musculus... [more]
SVOP_RAT2.556e-2131.13Synaptic vesicle 2-related protein OS=Rattus norve... [more]
SVOP_PONAB3.338e-2132.02Synaptic vesicle 2-related protein OS=Pongo abelii... [more]
SVOP_HUMAN3.338e-2132.02Synaptic vesicle 2-related protein OS=Homo sapiens... [more]
SVOP_BOVIN3.338e-2132.02Synaptic vesicle 2-related protein OS=Bos taurus G... [more]
YOU1_CAEEL1.832e-1932.54Putative transporter ZK637.1 OS=Caenorhabditis ele... [more]
S22A7_BOVIN4.370e-1331.58Solute carrier family 22 member 7 OS=Bos taurus GN... [more]
SVOPL_DANRE1.661e-1227.62Putative transporter SVOPL OS=Danio rerio GN=svopl... [more]
S22A6_BOVIN2.833e-1225.67Solute carrier family 22 member 6 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001E15_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001E15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712367 ID=CV712367; Name=CV712367; organism=Citrus sinensis; type=EST; length=732bp
AACAACTAAAACTTGTTTAGAGTTTGATACACCATCTATAGTGTTAACCA
ATTCCTTTCCCTTGGTTTCAAATGGGATAAGCAGAATAACGACTACTGAA
AGTACAATAAGAGCCTCTAATAGAATTATTGCAGCTGTTTGATGGCAACT
AGTCACAAGTCCAACCGCTACAAGAGGGCATACCATACCACCAATCCTTC
CTACAGCATACGCAACTCCAGCACCAGTTGATCTCATAGAAGTTGGATAT
ATCTCGGGGGCAAAAATGTTGGCGATAATAAAGGTTCCCATAGAGAACAT
GCGAGCTCCGGATAATAATGCTGTTAGCAAAATGTTGGACTGAAGTGTAA
CCAGTGGAAGCAGGAAAATACATACAAAGATAAACATAATTGTCATGGAA
AGCTTGCGACCCACTCTGTCCACAAGTAATGCAGCTGTAAGAAGTCCAGG
TAGCTCTGCAAAGCTAGTGATGAATACATTTATGTAGACACTAGCATCCT
GCACATTTTCTGAAAGCAAGATGCTTGAGCTACATTTACTTTGACTGCCG
CTCAGTTCAGATGCCAGCAATACAATACCATAATAGACGAATGAATTGCC
AAAGTATAATACCCACAATAGAATGGTTGTTTTAAAAAATCTTGGTGAGA
ACAACATTAGAAAGGATGAGAAGCCTGATTTGCGGACTGTGGTCCTTTTT
CTAGCTGAAGAGAGTAGAGGAGTCTCTTCTGA
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