CV712349

Overview
NameCV712349
Unique NameCV712349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.962e-82
Identity = 155/250 (62.00%), Postives = 185/250 (74.00%), Query Frame = 2
Query:   11 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKMQVATKFXXXXXXXXXXXXXXX----PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSFLHFLPRFKGENLD 745
            MA+E  +VPR+KLG+QGLEVS  G GCM +S  Y  P  E D I +I HA + GIT  DT+DVYG + NE+LLGKALK   RE++ +ATKF                   P YVR+ CEASLKRLD+D IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS  TIRRAHAVHPITAVQ+EWSLW+RD+EEEIIP CRELGIGIV YSPLGRGF   G  ++E++  + +  +LPRF+ ENL+
Sbjct:    1 MAKEGTKVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDYRKYLPRFQAENLE 250          
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.617e-79
Identity = 153/246 (62.20%), Postives = 177/246 (71.95%), Query Frame = 2
Query:   11 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKMQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSFLHFLPRFKGENLD 745
            MA     VPR+KLG+QGLEVS  G GCM +S  Y  P  E + I +I HA   G+TF DT+DVYG + NEVLLGKAL+   REK+++ATKF               P YVR+ CE S KRL VD IDLYYQHR+D  VPIE TIGE+KKLVEEGKIKYIGLSEAS  TIRRAHAVHPITAVQ+EWSLW+RD EE+IIP CRELGIGIV YSPLGRGFF  G  +V+++    F   +PRF+ ENLD
Sbjct:    1 MAAALVSVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKREIHGD-PAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQDFRKHMPRFQPENLD 245          
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.125e-43
Identity = 104/242 (42.98%), Postives = 141/242 (58.26%), Query Frame = 2
Query:   32 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREK-MQVATKFXXXXXXXXXXXXXXX-PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE---IIPLCRELGIGIVPYSPLGRGFF-GGKAVVENVPADSFLHFLPRFKGEN 739
            +P  K+G     V  +G+GCM L   Y  P SEE   +++ HA   G TF+D++D+YG  ANE  +G+  KQ  R K + +ATKF                PDY+    + SLKRL +D IDLYY HR     PIE+ +G +KK VE GKI+YIGLSE S  TIRRA AV+P++AVQ+E+S ++ +IE     ++  CRE  I IV Y+PLGRGF  G     ++ P   F    PR++ EN
Sbjct:    3 IPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYKSPDDFPEGDFRRKAPRYQKEN 241          
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 6.256e-31
Identity = 82/232 (35.34%), Postives = 124/232 (53.45%), Query Frame = 2
Query:   47 LGTQGLEVSKLGYGCMNLSGGYSSP-VSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLP-REKMQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLHFLPRFKGE 736
            LG   L+V ++G+G   + G    P +++E G  +++ A   G+ F DTA +YG   +E L+G+ +++   R ++ +ATK                 +++RS  E SLKRL  DYIDLYY H  D   P+ E  G +K+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E+E++P C + GI  +PY PL  G   GK   + V  D F    P+F+GE
Sbjct:    7 LGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATK-GAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGKFTQDTV-FDDFRKDKPQFQGE 236          
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.225e-28
Identity = 74/235 (31.49%), Postives = 119/235 (50.64%), Query Frame = 2
Query:   38 RVKLGTQGLEVSKLGYGCMNLSGGYSSP-VSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKMQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENV-PADSFLHFLPRFKGE 736
            + KLG   L+V  +G G   + G    P ++EE G  +++ A   G+T  DTA +YG   +E L+G+ L++  RE + +ATK                PD+++   + SLKRL+ DYIDL+Y H  D   P +E +  + ++ + GKI+ IG+S  S   ++ A+    +  +Q E++L  R+ E+   P  +E  I  +PY PL  G   GK   +   P     +    FKGE
Sbjct:    3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATK-AAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGE 236          
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.083e-26
Identity = 78/226 (34.51%), Postives = 114/226 (50.44%), Query Frame = 2
Query:   59 GLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQL-PREKMQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE-NVPADSFLHFLPRFK 730
            G+E S++G G   + G       E+  I  I+ A  +GIT  DTA  YG   +E ++GKA+K+   R+++ +ATK                   V    E SLKRL  DYIDLY  H  D  VPIEET   MK+L + GKI+ IG+S  S   +    AV P+  +Q  ++L+ R++EE ++P  ++  I  + Y  L RG   GK   E     D   +  P+F+
Sbjct:   10 GIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEEV-ENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQ 234          
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25
Identity = 75/233 (32.19%), Postives = 115/233 (49.36%), Query Frame = 2
Query:   38 RVKLGTQGLEVSKLGYGCMNLSGG--YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKMQVATKFXXXXXXXXXXXXXXX---------PDYVRSCCEASLKRLDVDYIDLYYQHRVDTS---VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVP 694
            ++ LGT  + +S++G G   + GG  ++  +  +  I  I  A   GI   DTA  Y    +EV++G+ALK+LPRE++ V TK                         P+ +R    ASL+RL +DYID+Y  H         PI ET+  + +L  EGKI+ IG +      IR       +  +Q ++S+  R +E E++PLCR+ GI +  YSPL +G   G    + VP
Sbjct:    3 KIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVP 235          
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25
Identity = 72/215 (33.49%), Postives = 112/215 (52.09%), Query Frame = 2
Query:   47 LGTQGLEVSKLGYGCMNLS----GGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPR-EKMQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 658
            LG   L VS+L  GCM       G ++  + EE    +IK A   GI FFDTA+ Y   ++E ++G+AL+   R E + VATK                   +    + SL+RL +DY+D+   HR D + PIEET+  +  +V+ GK +YIG S       A    +++ H      ++Q  ++L  R+ E E++PLC + G+ ++P+SPL RG
Sbjct:    6 LGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQ---ILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARG 217          
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25
Identity = 79/233 (33.91%), Postives = 121/233 (51.93%), Query Frame = 2
Query:   59 GLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN---ANEVLLGKALKQLPREKMQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRL-DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE-IIPLCRELGIGIVPYSPLGRGFFGGKA-----VVENVPADSFLHFLPRF 727
            G +V  +G+G M L+        +E+   ++ +A S+G  ++D  + YG +   +N  LL +  ++ P    +V                   PD+V    E  +  L     +DL+   RVD +VPIE T+  +K  V+ GKI  +GLSE S  TI+RAHAV PI AV++E+SL++RDIE   I+ +CR+L I I+ YSP  RG   G+      + E   +  FL +L RF
Sbjct:    6 GFKVGPIGFGLMGLTWK-PKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGGLDFKTLVPDGN-PDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTVEDLKEFAKSFPFLEYLDRF 236          
BLAST of CV712349 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.143e-24
Identity = 72/227 (31.72%), Postives = 110/227 (48.46%), Query Frame = 2
Query:   47 LGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKMQVATKFXXXXXXXXXXXXXXXPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTI-------RRAHAVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADS 703
            LG  GL VS+L YG     G   + +  ++  ++++     G+ FFD A+VY     E ++G+A++ L   +  V                     ++      SLKRLD+DY+D+ Y HR D + P+EET+  M  +++ G   Y G SE S   I        R   V PI   Q E++L++R  +E E +PL    G+G+  +SPL  G   GK    N+PADS
Sbjct:    6 LGRSGLRVSQLSYGAWVTFG---NQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPIVE-QPEYNLFSRHKVESEFLPLYSTYGLGLTTWSPLASGVLTGKYAKGNIPADS 228          
The following BLAST results are available for this feature:
BLAST of CV712349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
A115_TOBAC5.962e-8262.00Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE3.617e-7962.20IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO7.125e-4342.98Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
YCCK_BACSU6.256e-3135.34Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
IOLS_BACSU2.225e-2831.49Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
GS69_BACSU2.083e-2634.51General stress protein 69 OS=Bacillus subtilis GN=... [more]
YDJG_ECOLI1.034e-2532.19Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
YAJO_ECOLI1.034e-2533.49Uncharacterized oxidoreductase yajO OS=Escherichia... [more]
PLR1_SCHPO1.034e-2533.91Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
KCAB_ORYSJ1.143e-2431.72Probable voltage-gated potassium channel subunit b... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001E06_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712349 ID=CV712349; Name=CV712349; organism=Citrus sinensis; type=EST; length=746bp
AGCCTCAAAAATGGCAGAAGAGAAACACCAAGTTCCAAGAGTGAAATTGG
GTACCCAAGGCCTTGAGGTTTCAAAATTGGGTTATGGATGCATGAACCTG
AGTGGAGGTTATAGCTCTCCAGTCTCAGAAGAGGATGGCATATCAATGAT
AAAGCATGCTTTCAGTAAAGGAATCACTTTCTTTGATACTGCTGATGTGT
ACGGACAAAATGCTAATGAAGTTCTTCTTGGAAAGGCCTTGAAGCAGTTG
CCTAGAGAAAAGATGCAAGTAGCAACAAAGTTTGGGATTGCAGGAATAGG
AGTTGCTGGTGTGATCGTGAAGGGTGCCCCTGATTATGTGCGCTCGTGTT
GTGAAGCTAGCTTGAAGCGCCTTGATGTGGATTACATTGATCTATATTAT
CAACATAGAGTGGACACATCAGTCCCCATAGAGGAAACCATTGGCGAAAT
GAAGAAGCTGGTGGAAGAGGGTAAAATCAAGTACATTGGATTATCTGAGG
CCAGCCCAGGCACAATTAGGAGAGCACATGCTGTTCATCCCATCACAGCT
GTACAAATGGAATGGTCCCTCTGGACTCGTGATATTGAGGAAGAGATAAT
ACCCCTCTGCAGGGAACTCGGCATTGGAATAGTTCCATACAGTCCTCTTG
GTCGTGGATTTTTCGGTGGCAAAGCTGTTGTGGAGAATGTACCTGCAGAT
AGCTTTTTGCATTTTCTTCCTAGGTTCAAAGGAGAGAACCTGGACA
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