CV712323

Overview
NameCV712323
Unique NameCV712323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV712323 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.551e-15
Identity = 41/77 (53.25%), Postives = 50/77 (64.94%), Query Frame = -3 
Query:  342 SHLTIL-FRNLYLTGSVPPEFGDSLHLQVFYLENNKRTDSIPESLGRFGCLIKLNLARNKLSGSIPTSFGNLK*LTN 569
            ++LTIL      LTGS+P E G+SL LQ   L NN+    IPES G  G L+KLNL +NKL G +P S GNLK LT+
Sbjct:  628 TNLTILDLSGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTH 704

HSP 2 Score: 28.4906 bits (62), Expect = 2.551e-15
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = -1 
Query:  299 THMDLSYNELAGELN 343
            THMDLS+N L+GEL+
Sbjct:  703 THMDLSFNNLSGELS 717
The following BLAST results are available for this feature:
BLAST of CV712323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EXS_ARATH2.551e-1553.25Leucine-rich repeat receptor protein kinase EXS OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001D17_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001D17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712323 ID=CV712323; Name=CV712323; organism=Citrus sinensis; type=EST; length=643bp
GCTCGGAGTATTCCTGGGACATGGACGCTGCGGCGGCGACGAATAATGAA
GTGGAGGAAGGAGATGAAGGCAGTGGAGGAGCAGGAGAAGGACCATCAAG
ATCAGATGATGACTTTGATGGAGGTGGTGATAATGATCAGCAAATTAGAG
AAATGGAAGCGTATTTTTTGGCTTAGTGCAAACTAGTTGGAAGGGCTTTC
GTACCCACTTGGATTTAAGTTATAATGAGTTAGATGGTGAGCTTAATCCT
TGTTCTTTGTCACACATTTTGAGCTTGGTGGGGATTCAAAAACAAAGGAT
TAAGCTCACCAGCAAGCTCATTATAGCTTAAATCCATGTGGGTTTGTAAG
CTATTTCAAGTTCCCAAAACTAGTTGGAATTGAGCCAGATAACTTATTCC
TAGCCAAATTCAACTTTATCAAACAACCGAAACGACCTAAGCTCTCAGGG
ATGGAATCTGTACGCTTGTTATTTTCCAAATAAAATACTTGAAGATGGAG
AGAGTCACCAAATTCTGGTGGAACGGAACCTGTTAAGTACAGGTTCCGAA
ATAATATTGTAAGATGTGAACGATATAGTGGTATCATGCATATTATCCAT
AGTGTAACAGATATAAACTCAAGTCAACTTTGGTATCTTTCGG
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