CV712302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712302 vs. ExPASy Swiss-Prot
Match: YCF68_EUCGG (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.252e-37 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = -2 Query: 179 LRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG 310 +RRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG Sbjct: 1 MRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG 44 HSP 2 Score: 80.8777 bits (198), Expect = 2.252e-37 Identity = 41/59 (69.49%), Postives = 42/59 (71.19%), Query Frame = -1 Query: 3 GFENKLLLRRIDGAIQVRSNVDPTFYSLVXXXXXXXXXXXXXXXDNPYIPYQCMDSYLS 179 GFE K LLRRIDGAIQVRSNVDPTFYSLV +NPYIPYQCMDSYLS Sbjct: 44 GFETKPLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPYQCMDSYLS 102
BLAST of CV712302 vs. ExPASy Swiss-Prot
Match: YCF68_PINTH (Uncharacterized protein ycf68 OS=Pinus thunbergii GN=ycf68 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.301e-12 Identity = 41/72 (56.94%), Postives = 44/72 (61.11%), Query Frame = -1 Query: 3 MAYFSC-SNRGFENKLLLRRIDGAIQVRSNVDPTFYSLV---XXXXXXXXXXXXXXXDNPYIPYQCMDSYLS 206 MAY SC GF +L+LRRIDGAIQVRSN DPTFYS V +NPYIPYQCMD YLS Sbjct: 1 MAYSSCLCEPGFGTELILRRIDGAIQVRSNTDPTFYSFVDLGGPGVPVVIHLGSSLLENPYIPYQCMDGYLS 72
BLAST of CV712302 vs. ExPASy Swiss-Prot
Match: YCF68_PINKO (Uncharacterized protein ycf68 OS=Pinus koraiensis GN=ycf68 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12 Identity = 41/72 (56.94%), Postives = 44/72 (61.11%), Query Frame = -1 Query: 3 MAYFSCS-NRGFENKLLLRRIDGAIQVRSNVDPTFYSLV---XXXXXXXXXXXXXXXDNPYIPYQCMDSYLS 206 MAY SC GF +L+LRRIDGAIQVRSN DPTFYS V +NPYIPYQCMD YLS Sbjct: 1 MAYSSCLFEPGFGTELILRRIDGAIQVRSNADPTFYSFVDLGGPGGPVVIHHGSSLLENPYIPYQCMDGYLS 72
BLAST of CV712302 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSJ (Uncharacterized protein ycf68 OS=Oryza sativa subsp. japonica GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.312e-12 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -1 Query: 93 MAYFSCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 206 MAY SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV Sbjct: 1 MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 33.4982 bits (75), Expect = 9.312e-12 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = -2 Query: 2 LFSIIHTSLISVWTAISR 55 LFS IHTSLISVW AISR Sbjct: 52 LFSRIHTSLISVWRAISR 69
BLAST of CV712302 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSI (Uncharacterized protein ycf68 OS=Oryza sativa subsp. indica GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.312e-12 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -1 Query: 93 MAYFSCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 206 MAY SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV Sbjct: 1 MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 33.4982 bits (75), Expect = 9.312e-12 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = -2 Query: 2 LFSIIHTSLISVWTAISR 55 LFS IHTSLISVW AISR Sbjct: 52 LFSRIHTSLISVWRAISR 69
BLAST of CV712302 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSA (Uncharacterized protein ycf68 OS=Oryza sativa GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.312e-12 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -1 Query: 93 MAYFSCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 206 MAY SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV Sbjct: 1 MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 33.4982 bits (75), Expect = 9.312e-12 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = -2 Query: 2 LFSIIHTSLISVWTAISR 55 LFS IHTSLISVW AISR Sbjct: 52 LFSRIHTSLISVWRAISR 69
BLAST of CV712302 vs. ExPASy Swiss-Prot
Match: YCF68_ORYNI (Uncharacterized protein ycf68 OS=Oryza nivara GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.312e-12 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -1 Query: 93 MAYFSCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 206 MAY SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV Sbjct: 1 MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 33.4982 bits (75), Expect = 9.312e-12 Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = -2 Query: 2 LFSIIHTSLISVWTAISR 55 LFS IHTSLISVW AISR Sbjct: 52 LFSRIHTSLISVWRAISR 69 The following BLAST results are available for this feature:
BLAST of CV712302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712302 ID=CV712302; Name=CV712302; organism=Citrus sinensis; type=EST; length=641bpback to top |