CV712293

Overview
NameCV712293
Unique NameCV712293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_ARATH (Adenylosuccinate synthetase, chloroplastic OS=Arabidopsis thaliana GN=At3g57610 PE=1 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 7.202e-98
Identity = 176/206 (85.44%), Postives = 192/206 (93.20%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG  ++M DIDFGTYPFVTSSSPSAGGICTGLGIAP VVGDLIGVVKAYTTRVGSGPFPTE LG GGD LRLAGQEFGTTTGRPRRCGWLDIVALK+ CQINGF+SLNLTKLDVLS+L EIQLGVAYK+ DGTP+KSFP DL LLE+L VEYEVL GW+SDISS+RNYSDLPKAA+Q+VERIEELVGVPI+YIG+GPGRDALI+K
Sbjct:  285 VEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAGQEFGTTTGRPRRCGWLDIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDGTPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQQYVERIEELVGVPIHYIGIGPGRDALIYK 490          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_WHEAT (Adenylosuccinate synthetase, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 2.398e-93
Identity = 165/206 (80.10%), Postives = 187/206 (90.78%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG  ++M DIDFGTYPFVTSSSPSAGGICTGLGIAPRV+GDLIGVVKAYTTRVGSGPFPTE+LG+ GD LR AG EFGTTTGRPRRCGWLDIVALKYCC INGFSSLNLTKLDVLS LPEI+LGV+Y Q+DG  ++SFP DL  LEQ++V YEVL GW SDISS+R+YS+LP+AAR++VERIEEL GVP++YIGVGPGRDALI+K
Sbjct:  271 VEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTELLGEEGDVLRKAGMEFGTTTGRPRRCGWLDIVALKYCCDINGFSSLNLTKLDVLSGLPEIKLGVSYNQMDGEKLQSFPGDLDTLEQVQVNYEVLPGWDSDISSVRSYSELPQAARRYVERIEELAGVPVHYIGVGPGRDALIYK 476          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MAIZE (Adenylosuccinate synthetase, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 9.428e-90
Identity = 160/206 (77.67%), Postives = 182/206 (88.35%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG  ++M DIDFGTYPFVTSSSPSAGGICTGLGIAPR +GDLIGVVKAYT+RVGSGPFPTE+ G+ GD LR AG EFGTTTGRPRRCGWLDIVALK+ CQINGFSSLNLTKLDVLS L EI++GV+Y Q DG  ++SFP DL  LEQ++V YEVL GWQSDISS+R Y +LP+AAR +VERIEELVGVP++YIGVGPGRDALI+K
Sbjct:  279 VEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRAIGDLIGVVKAYTSRVGSGPFPTELFGEEGDRLRKAGMEFGTTTGRPRRCGWLDIVALKHSCQINGFSSLNLTKLDVLSGLSEIKVGVSYTQTDGQKLQSFPGDLDTLEQVQVNYEVLPGWQSDISSVRRYDELPQAARLYVERIEELVGVPVHYIGVGPGRDALIYK 484          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_SCHPO (Adenylosuccinate synthetase OS=Schizosaccharomyces pombe GN=ade2 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 3.377e-63
Identity = 114/206 (55.34%), Postives = 158/206 (76.70%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG+++ M D+DFGTYPFVTSS+ + GG+CTGLG+ P+ + + IGVVKAYTTRVG+GPFPTE L + GDHL+  G+E G TTGR RRCGWLD+V +KY   ING++SLNLTKLD+L  L EI++ VAY  ++G  I++FPADL  LE+ ++ YE   GW+   + I ++  +P+ A++++E IE+ VGVPI +IGVGPGRD ++ K
Sbjct:  229 VEGANALMLDLDFGTYPFVTSSNTTVGGVCTGLGVPPQRIANSIGVVKAYTTRVGAGPFPTEQLNEIGDHLQSVGREVGVTTGRKRRCGWLDLVVVKYSTMINGYTSLNLTKLDILDALDEIKVAVAY-IINGKRIETFPADLDSLEEAEIVYETFPGWKVPTTGITHWDQMPENAKKYIEFIEKFVGVPITFIGVGPGRDEMLVK 433          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_YEAST (Adenylosuccinate synthetase OS=Saccharomyces cerevisiae GN=ADE12 PE=1 SV=3)

HSP 1 Score: 238.81 bits (608), Expect = 2.859e-62
Identity = 111/206 (53.88%), Postives = 153/206 (74.27%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG+++ M DIDFGTYP+VTSS+   GG+ TGLGI PR + ++ GVVKAYTTRVG GPFPTE L + G+ L+  G EFG TTGR RRCGWLD+V LKY   ING++SLN+TKLDVL    EI +G++Y  + G  +  FP DL +L +++VEY+VL GW  DI+ I  Y DLP+ A+++++ IE+ VGVP+ ++G GP R++++ K
Sbjct:  226 VEGANALMLDIDFGTYPYVTSSNTGIGGVLTGLGIPPRTIDEIYGVVKAYTTRVGEGPFPTEQLNENGEKLQTIGAEFGVTTGRKRRCGWLDLVVLKYSTLINGYTSLNITKLDVLDTFKEIPVGISY-SIQGKKLDLFPEDLNILGKVEVEYKVLPGWDQDITKITKYEDLPENAKKYLKYIEDFVGVPVEWVGTGPARESMLHK 430          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_DICDI (Adenylosuccinate synthetase OS=Dictyostelium discoideum GN=purA PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.733e-62
Identity = 126/204 (61.76%), Postives = 146/204 (71.57%), Query Frame = -3
Query:  192 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 800
            IEG+ S+M D+DFG YP+VTSS+ S GG CTGLGI+P  V   IGVVKAYTT+VGSGPFPTE     GD LR AG EFGTTTGRPRR GWLD V L+Y   IN F+ LNLTKLDVLS+  EI++GV YK   G  IKSFPA L  L Q +V YE   GW+ D+S +  Y  LP  A+ +++RIEELVGVPI YIGVG  R  LI
Sbjct:  219 IEGAQSTMLDLDFGCYPYVTSSASSVGGACTGLGISPNKVVTQIGVVKAYTTKVGSGPFPTEQNDHVGDSLRKAGSEFGTTTGRPRRIGWLDAVVLRYTSMINDFTRLNLTKLDVLSDFEEIKIGVDYK-YKGETIKSFPASLETLAQCEVVYESFPGWKCDLSHVTEYDQLPIQAKNYIKRIEELVGVPIVYIGVGVERKNLI 421          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA1_BOVIN (Adenylosuccinate synthetase isozyme 1 OS=Bos taurus GN=ADSSL1 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.271e-58
Identity = 107/204 (52.45%), Postives = 153/204 (75.00%), Query Frame = -3
Query:  192 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 800
            +EG+++++ DIDFGTYPFVTSS+ + GG+CTGLGI P+ +G++ GVVKAYTTRVG G FPTE + + GD L+  G E+G TTGR RRCGWLD++ L+Y   +NGF++L LTKLD+L  L EI++GVAYK + G  I  FPA+  +L++++VEYE L GW++D +  R + DLP  A+ ++  +E  VGV + ++GVG  RD++I
Sbjct:  252 VEGANAALLDIDFGTYPFVTSSNCTVGGVCTGLGIPPQNIGEVYGVVKAYTTRVGIGAFPTEQINEIGDLLQSRGHEWGVTTGRKRRCGWLDLMILRYAHMVNGFTALALTKLDILDALDEIKVGVAYK-LGGKRIPYFPANQEILQKVEVEYETLPGWKADTTGARKWEDLPPQAQSYIRFVENHVGVAVKWVGVGKSRDSMI 454          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_HALOH (Adenylosuccinate synthetase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=purA PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.272e-58
Identity = 110/203 (54.19%), Postives = 145/203 (71.43%), Query Frame = -3
Query:  192 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+  ++ DID+GTYP+VTSS+P+AGG+CTG G+ P  + D+IGVVKAY TRVG GPFPTE+    GD LR  G E+G TTGRPRRCGWLDI  LK+  ++NG + L LTKLDVLS L E+++   Y+  D   I+ FP ++ +L   +  YEVL GW  DI+ +R Y DLP+ AR++V+ IE++V VP+  IGVGPGR   I
Sbjct:  220 EGAQGTLLDIDYGTYPYVTSSNPTAGGVCTGTGVGPVWIDDVIGVVKAYLTRVGEGPFPTELNNDIGDKLRDKGHEYGVTTGRPRRCGWLDIPILKHAVRVNGLTELALTKLDVLSGLREVKVCTGYRYGDRL-IEEFPGNIDILSGCEPVYEVLPGWDDDITGVREYGDLPENARRYVKLIEDMVKVPVTIIGVGPGRKEAI 421          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_DROME (Adenylosuccinate synthetase OS=Drosophila melanogaster GN=CG17273 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.272e-58
Identity = 106/204 (51.96%), Postives = 148/204 (72.55%), Query Frame = -3
Query:  192 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 800
            +EG++++M DIDFGTYP+VTSS+ S GG+ TGLG+ P+ +G++IGVVKAYTTRVG GPFPTE L   GD L+  G E G TT R RRCGWLDI  LKY   +NG++ + LTKLD+L  LPEI++ VAYK+ +G  +  FP  +  L  ++VEY VL GWQ+    +RN+ +LP+ A+ +V  +E  + VP+ ++GVG GR+++I
Sbjct:  241 VEGANAAMLDIDFGTYPYVTSSNCSIGGVLTGLGLPPQTIGEVIGVVKAYTTRVGDGPFPTEQLNDIGDLLQTRGFEVGVTTKRKRRCGWLDIPLLKYTSLVNGYTCICLTKLDILDTLPEIKVAVAYKKPNGEKLDHFPGTIAELGNIEVEYAVLPGWQTSTEEVRNFKELPENAQSYVRLLESELSVPVRWVGVGKGRESII 444          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA2_MOUSE (Adenylosuccinate synthetase isozyme 2 OS=Mus musculus GN=Adss PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 5.579e-58
Identity = 109/204 (53.43%), Postives = 155/204 (75.98%), Query Frame = -3
Query:  192 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 800
            +EG+++++ DIDFGTYPFVTSS+ + GG+CTGLG+ P+ VG++ GVVKAYTTRVG G FPTE   + G+ L+  G+EFG TTGR RRCGWLD+V+LKY   INGF++L LTKLD+L    EI++GVAYK +DG  I  FPA+  +L +++V+Y+ L GW +DIS+ R + +LP  A+ +V  IE+ + +P+ +IGVG  R+++I
Sbjct:  251 VEGANAALLDIDFGTYPFVTSSNCTVGGVCTGLGMPPQNVGEVYGVVKAYTTRVGIGAFPTEQDNEIGELLQTRGREFGVTTGRKRRCGWLDLVSLKYAHMINGFTALALTKLDILDMFTEIKVGVAYK-LDGETIPHFPANQEVLNKVEVQYKTLPGWNTDISNARTFKELPVNAQNYVRFIEDELQIPVKWIGVGKSRESMI 453          
The following BLAST results are available for this feature:
BLAST of CV712293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PURA_ARATH7.202e-9885.44Adenylosuccinate synthetase, chloroplastic OS=Arab... [more]
PURA_WHEAT2.398e-9380.10Adenylosuccinate synthetase, chloroplastic (Fragme... [more]
PURA_MAIZE9.428e-9077.67Adenylosuccinate synthetase, chloroplastic OS=Zea ... [more]
PURA_SCHPO3.377e-6355.34Adenylosuccinate synthetase OS=Schizosaccharomyces... [more]
PURA_YEAST2.859e-6253.88Adenylosuccinate synthetase OS=Saccharomyces cerev... [more]
PURA_DICDI3.733e-6261.76Adenylosuccinate synthetase OS=Dictyostelium disco... [more]
PURA1_BOVIN3.271e-5852.45Adenylosuccinate synthetase isozyme 1 OS=Bos tauru... [more]
PURA_HALOH4.272e-5854.19Adenylosuccinate synthetase OS=Halothermothrix ore... [more]
PURA_DROME4.272e-5851.96Adenylosuccinate synthetase OS=Drosophila melanoga... [more]
PURA2_MOUSE5.579e-5853.43Adenylosuccinate synthetase isozyme 2 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001C24_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712293 ID=CV712293; Name=CV712293; organism=Citrus sinensis; type=EST; length=844bp
GCTTTGTCTCATAAAAGTTGTTATTTAAGGTATGAGTTATCAGTTAAAGA
AGTATCAACAACACGAGCAACATTTGTTAAACCAAGATGGTATTTGTCAG
CATTTGGCCATGGATGGTTTCCTTCAGAAATGAAGCTGAGAGATATAAAA
GAACAGGCGGCCTTTGGCTGTTCATTGTTTTCCTATTTAAATATGAGAGC
ATCACGTCCAGGTCCGACACCAATGTAATTTATAGGTACACCAACAAGTT
CTTCTATCCTCTCTACAAACTGACGTGCAGCCTTTGGGAGGTCTGAGTAG
TTTCTAATGGAAGAAATATCAGACTGCCATCCCAGCAGAACTTCATATTC
CACCTTCAATTGTTCAAGAAGCACAAGATCTGCAGGGAATGATTTAATTG
GTGTACCATCAACTTGTTTATAAGCAACTCCAAGCTGAATTTCTGGAAGT
TCTGATAAAACATCCAGTTTGGTGAGATTCAAAGAAGAAAAGCCGTTAAT
TTGGCAGCAGTACTTCAATGCAACTATATCAAGCCAACCACAGCGACGAG
GACGACCAGTAGTTGTGCCAAACTCTTGCCCAGCTAACCTAAGGTGGTCA
CCCCCTTGGCCCAAAATTTCCGTCGGGAAAGGACCAGAACCAACTCTCGT
AGTGTATGCTTTTACCACGCCAATTAGATCACCCACAACTCTTGGAGCAA
TGCCAAGGCCGGTGCAAATTCCGCCGGCTGATGGGCTAGAGGAAGTTACA
AATGGATAAGTTCCAAAGTCAATATCCATGGAACTGTCACTGCCTTCTAT
ATGTCATCAGACGGGTCAAATCACAACGAGTTCGATTTTGAGTT
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