CV712276

Overview
NameCV712276
Unique NameCV712276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV712276_ssr427 microsatellite CV712276_ssr427:427..436. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPA15_ARATH (Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 97/152 (63.82%), Postives = 113/152 (74.34%), Query Frame = -2
Query:  405 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENL-PEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELC 857
            M++ ME LLY YG DIVF+GHVHAYER NRVYNY LD CGPVYI +GDGGN E++ ++HADDPGKCP       P  GG C  NFT      KFCW +QP++SA RESSFGHGILE+ N T+ALWTW+RNQD+  E   GD IYIVRQP+ C
Sbjct:  376 MKEAMEELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDPGKCPEPLTTPDPVMGGFCAWNFT---PSDKFCWDRQPDYSALRESSFGHGILEMKNETWALWTWYRNQDSSSE--VGDQIYIVRQPDRC 522          
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPA13_ARATH (Purple acid phosphatase 13 OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.423e-40
Identity = 89/154 (57.79%), Postives = 102/154 (66.23%), Query Frame = -2
Query:  405 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCH---LNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYIVRQPELC 857
            MR  +E LLY Y VDIVF+ HV AYER NRVYNYTLD CGPVYIT G GG   +++  H DDPG  P   +N       C    LN T  P K + C  KQPE+SAYRESSFG GILEV N T+ALW+W+RNQD Y      D I+IVRQPE+C
Sbjct:  396 MRIHLEDLLYNYRVDIVFNSHVDAYERSNRVYNYTLDQCGPVYITTGAGG-AGKLETQHVDDPGNIPDPSQNYS-----CRSSGLNSTLEPVKDETCPVKQPEYSAYRESSFGFGILEVKNETHALWSWNRNQDLYY--LAADVIHIVRQPEMC 541          
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPA23_ARATH (Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.624e-30
Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = -2
Query:  651 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSA 857
            MRQEME LLYQY VDIVF+GHVHAYERMNR+YNYTLD CGPVYIT+GDGGNIE+VDVD ADDPGKC S+
Sbjct:  377 MRQEMEELLYQYRVDIVFAGHVHAYERMNRIYNYTLDPCGPVYITIGDGGNIEKVDVDFADDPGKCHSS 445          
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPA18_ARATH (Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.097e-28
Identity = 68/144 (47.22%), Postives = 83/144 (57.64%), Query Frame = -2
Query:  426 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNYKEDSRGDHIYI 857
            M  EME LLY  GVDIVF+GHVHAYER  RV N   D CGPV+IT+GDGGN E +   + D     PS                              PEWS +RE+SFGHG L++VNST+ALWTWHRN D+  E +R D +++
Sbjct:  308 MMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKYKD-----PS------------------------------PEWSVFREASFGHGELQMVNSTHALWTWHRNDDD--EPTRSDEVWL 414          
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPA20_ARATH (Probable inactive purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.695e-23
Identity = 56/132 (42.42%), Postives = 71/132 (53.79%), Query Frame = -2
Query:  462 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDN 857
            M++ ME LLY+  VD+VF+GHVHAYER +RVY    D CGPVYI +GDGGN+E +   + D                                     PE S +RE+SFGHG L V N+T+A W WHRN D+
Sbjct:  310 MKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGNLEGLATKYRD-----------------------------------PNPEISLFREASFGHGQLVVENATHARWEWHRNDDD 406          
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPA22_ARATH (Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 56/132 (42.42%), Postives = 72/132 (54.55%), Query Frame = -2
Query:  462 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDN 857
            MR+ ME+LL+   VD+VFSGHVHAYER  RVYN   D CGP++IT+GDGGN E +                          L+F   P+            S +RESSFGHG L+V++   A W+WHRN D+
Sbjct:  309 MREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGNREGL-------------------------ALSFKKPPS----------PLSEFRESSFGHGRLKVMDGKRAHWSWHRNNDS 405          
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPA21_ARATH (Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.084e-19
Identity = 52/131 (39.69%), Postives = 66/131 (50.38%), Query Frame = -2
Query:  465 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTLDACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQD 857
            MR  +E+LLY+  VD+VF+GHVH YER   +YN   D CGP+YIT+GDGGN E +                          L F             Q   S +RESSFGHG L +++   A W+WHRN D
Sbjct:  313 MRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGNREGL-------------------------ALRFK----------KPQSPLSEFRESSFGHGRLRIIDHKRAHWSWHRNND 408          
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPAF2_IPOBA (Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.172e-18
Identity = 54/144 (37.50%), Postives = 69/144 (47.92%), Query Frame = -2
Query:  459 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTL-----------DACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQDNY 857
            MR   E    Q+ VD+VF+GHVHAYER  RV N              D   PVYIT+GDGGN+E +  +  D                                    QPE+SA+RE+SFGH  L++ N T+A ++WHRNQD Y
Sbjct:  332 MRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYDIVNGKCTPVRDQSAPVYITIGDGGNLEGLATNMTD-----------------------------------PQPEYSAFREASFGHATLDIKNRTHAYYSWHRNQDGY 440          
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPAF_SOYBN (Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.770e-17
Identity = 53/142 (37.32%), Postives = 68/142 (47.89%), Query Frame = -2
Query:  465 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTL-----------DACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQD 857
            MR   E    QY VD+VF+GHVHAYER  RV N              D   PVYIT+GDGG +E +                N+ E                      QP++SA+RE+SFGH I ++ N T+A ++WHRNQD
Sbjct:  330 MRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGL--------------ATNMTE---------------------PQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQD 436          
BLAST of CV712276 vs. ExPASy Swiss-Prot
Match: PPA12_ARATH (Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.398e-17
Identity = 51/142 (35.92%), Postives = 68/142 (47.89%), Query Frame = -2
Query:  465 MRQEMEALLYQYGVDIVFSGHVHAYERMNRVYNYTL-----------DACGPVYITVGDGGNIEQVDVDHADDPGKCPSAGENLPEFGGVCHLNFTSGPAKGKFCWSKQPEWSAYRESSFGHGILEVVNSTYALWTWHRNQD 857
            +R   E    +Y VD+VF+GHVHAYER  RV N              D   P+YIT+GDGGN E +  D                                       QP++SA+RE+SFGHG+LE+ N T+A ++W+RNQD
Sbjct:  336 LRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTD-----------------------------------MMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQD 442          
The following BLAST results are available for this feature:
BLAST of CV712276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PPA15_ARATH4.714e-5263.82Purple acid phosphatase 15 OS=Arabidopsis thaliana... [more]
PPA13_ARATH1.423e-4057.79Purple acid phosphatase 13 OS=Arabidopsis thaliana... [more]
PPA23_ARATH6.624e-3085.51Purple acid phosphatase 23 OS=Arabidopsis thaliana... [more]
PPA18_ARATH8.097e-2847.22Purple acid phosphatase 18 OS=Arabidopsis thaliana... [more]
PPA20_ARATH2.695e-2342.42Probable inactive purple acid phosphatase 20 OS=Ar... [more]
PPA22_ARATH2.523e-2142.42Purple acid phosphatase 22 OS=Arabidopsis thaliana... [more]
PPA21_ARATH3.084e-1939.69Purple acid phosphatase 21 OS=Arabidopsis thaliana... [more]
PPAF2_IPOBA1.172e-1837.50Purple acid phosphatase 2 OS=Ipomoea batatas GN=PA... [more]
PPAF_SOYBN3.770e-1737.32Purple acid phosphatase OS=Glycine max GN=PAP PE=1... [more]
PPA12_ARATH8.398e-1735.92Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001C16_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001C16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712276 ID=CV712276; Name=CV712276; organism=Citrus sinensis; type=EST; length=858bp
TTTTTTTTTTTTTTTTTCAGAAACAACCAAGTTCTTGTCATTCACATACC
TTGGTCTCTGTTATCAAACATATGCTAAACTACAAAGATGTGTTAAAAAG
TGATGCTTAATGTTCAATTTGATCCCTAGAAAGCTTGTTATAATGATCTA
GTAACAATGATAGCCATGATGAATAGCGAAAACGCCTGCATCCATTTAGC
AGATGTGGCTGCGGTTTCATTTGTTTGCTGCCCTCTTTGCTGGGTATGGT
TGTTTCCCCATCATGAAAAAGACAGAACAAAGATTAGCTACACTGGCAAT
TCACCAATAATGTTGCAATGATCATGAGTTGAGTTCATAACTACTGTGAC
TTAGTGGGAGTAGATGCAAGATTAGAAAATTACTTTGGCAGGTGGAGTAT
CGAAACACAATTCTGGTTGTCGCACGATATATATATGATCGCCACGGCTA
TCTTCCTTGTAATTATCCTGATTTCGGTGCCAAGTCCATAATGCATATGT
TGAATTCACAACCTCAAGTATTCCATGACCAAAGCTGCTTTCTCTATATG
CACTCCACTCTGGTTGCTTGCTCCAGCAAAACTTGCCTTTTGCAGGACCA
GAAGTAAAGTTCAGATGACATACCCCACCGAATTCTGGTAAGTTTTCCCC
GGCTGAGGGACACTTTCCAGGGTCATCTGCATGATCGACATCAACTTGCT
CAATATTTCCACCATCTCCAACTGTTATGTAAACAGGCCCGCATGCATCC
AATGTGTAATTATAAACTCTATTCATCCTCTCATAAGCGTGAACATGACC
AGAAAAAACAATATCGACACCATATTGATACAGAAGTGCTTCCATTTCTT
GCCTCATG
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