CV712267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712267 vs. ExPASy Swiss-Prot
Match: UFD1_RAT (Ubiquitin fusion degradation protein 1 homolog OS=Rattus norvegicus GN=Ufd1l PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.300e-19 Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = -2 Query: 411 RNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASASSRATAKAEEASVETEPKFSPFTGVARRLDGKPLTYQPPPVP 719 RN++CLTTGD I + YN K Y + ++ETKP A+SIIE D VDF PL YKEPE+P+ S +A+ + E F F+G RLDGK +P P P Sbjct: 147 RNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERPVQHEES-IEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEPSPSP 248
BLAST of CV712267 vs. ExPASy Swiss-Prot
Match: UFD1_MOUSE (Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = -2 Query: 411 RNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASASSRATAKAEEASVETEPKFSPFTGVARRLDGKPLTYQPPPVP 719 RN++C+TTGD I + YN K Y + ++ETKP A+SIIE D VDF PL YKEP++P+ S +A+ + E F F+G RLDGK +P P P Sbjct: 147 RNFACMTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPKRPVQHEES-IEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEPSPSP 248
BLAST of CV712267 vs. ExPASy Swiss-Prot
Match: UFD1_HUMAN (Ubiquitin fusion degradation protein 1 homolog OS=Homo sapiens GN=UFD1L PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = -2 Query: 411 RNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASASSRATAKAEEASVETEPKFSPFTGVARRLDGKPLTYQPPPVP 719 RN++CLTTGD I + YN K Y + ++ETKP A+SIIE D VDF PL YKEPE+ + S +A+ + E F F+G RLDGK +P P P Sbjct: 147 RNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVQHEES-TEGEADHSGYAGELGFRAFSGSGNRLDGKKKGVEPSPSP 248
BLAST of CV712267 vs. ExPASy Swiss-Prot
Match: UFD1_DICDI (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum GN=ufd1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 52/167 (31.14%), Postives = 74/167 (44.31%), Query Frame = -2 Query: 309 RNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKE---------------------------PEKPIASASSRATAKAEEASVETEPKFSPFTGVARRLDGK---PLTYQPPPVPSLGSKDKQPATSNGTGQPSAGSTSQNAARQSQGK 719 R ++ LT D IM+ YNN KYY+ ++E KP+NAISIIE D VDFAPP+D KE KPI + ++ + EPKF F G RLDGK PL P + + + + +N + +++ N + K Sbjct: 151 RKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADVSVDFAPPMDSKEATSPSTSSPGSHVSGPSKGLTFGPASTSAKPIPGGKKKKDESDSDSDSDDEPKFKAFAGTGARLDGKVGTPLGTSPKTLNTNNNNNNNNNNNNNNNNNNNNNSNNNNTKNEDTK 317
BLAST of CV712267 vs. ExPASy Swiss-Prot
Match: UFD1_DROME (Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster GN=Ufd1-like PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12 Identity = 41/100 (41.00%), Postives = 54/100 (54.00%), Query Frame = -2 Query: 441 RNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPIASASSRATAK-------AEEASVETEPKFSPFTGVARRLDGK 719 RN++CLT GD I + YN K Y + ++ETKP NA+SIIE D V+F P+ YK+ + AS S + A A + E F G RLDGK Sbjct: 144 RNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRLDGK 243 The following BLAST results are available for this feature:
BLAST of CV712267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712267 ID=CV712267; Name=CV712267; organism=Citrus sinensis; type=EST; length=720bpback to top |