CV712266

Overview
NameCV712266
Unique NameCV712266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6098 contig Csv1_Contig6098:195..1065. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.458e-56
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            LEPVYLVEIQAPE ALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRA+TSGQAFPQCVFDHW+MM SDPLE GSQAS LV  IRKRKGLKEQMTP+SE+EDKL
Sbjct:  726 LEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFEDKL 843          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.543e-50
Identity = 92/118 (77.97%), Postives = 107/118 (90.68%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            LEPVYLVEIQ PEQA+GG+YSVLNQKRG VFEE+QRPGTP++N+KAYLPV+ESFGF+STLRAAT+GQAFPQCVFDHW+ M SDP + GSQA+ LV+DIRKRKGLK +   +SEYEDKL
Sbjct:  728 LEPVYLVEIQCPEQAMGGVYSVLNQKRGMVFEELQRPGTPIFNLKAYLPVIESFGFTSTLRAATAGQAFPQCVFDHWEAMGSDPTQVGSQANTLVMDIRKRKGLKPEPAALSEYEDKL 845          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.575e-41
Identity = 81/117 (69.23%), Postives = 93/117 (79.49%), Query Frame = -1
Query:  167 EPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 517
            EPV+LVEIQ  E A+GGIYSVLN+KRGHVF E QR GTPLYNIKAYLPV ESFGF+  LR AT+GQAFPQ VFDHW  MS DPL+P S+  Q+V + RKRKGLKE +   +EY D+L
Sbjct:  726 EPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=2 SV=4)

HSP 1 Score: 166.007 bits (419), Expect = 2.498e-40
Identity = 77/118 (65.25%), Postives = 95/118 (80.51%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            LEPVYLVEIQ PE A+GGIY VLN++RGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DPLE G++ +Q+VLD RKRKGLKE +  +  Y DK+
Sbjct:  735 LEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.619e-39
Identity = 78/117 (66.67%), Postives = 92/117 (78.63%), Query Frame = -1
Query:  167 EPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 517
            EPV+LVEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+  LR AT GQAFPQ VFDHW  + SDPL+P S+A ++VL  RKR G+KE++    EY DKL
Sbjct:  726 EPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPLDPTSKAGEIVLAARKRHGMKEEVPGWQEYYDKL 842          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.712e-39
Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = -1
Query:  167 EPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 517
            EPV+LVEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLP+ ESFGF+  LR AT GQAFPQ VFDHW  + +DPL+P ++A ++VL  RKR+G+KE++    EY DKL
Sbjct:  726 EPVFLVEIQCPEQAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPINESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPSTKAGEIVLAARKRQGMKEEVPGWQEYYDKL 842          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.037e-39
Identity = 77/117 (65.81%), Postives = 92/117 (78.63%), Query Frame = -1
Query:  167 EPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 517
            EPV+LVEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+  LR AT GQAFPQ VFDHW  ++SDPL+P S+A ++V   RKR G+KE++    EY DKL
Sbjct:  726 EPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLNSDPLDPTSKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.050e-38
Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = -1
Query:  167 EPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 517
            EPV+LVEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+  LR AT GQAFPQ VFDHW  + +DPL+P ++A ++V++ RKR GLKE +    EY DKL
Sbjct:  726 EPVFLVEIQCPEQAVGGIYSVLNRKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVVEARKRHGLKENVPGWQEYYDKL 842          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4)

HSP 1 Score: 159.458 bits (402), Expect = 2.338e-38
Identity = 75/118 (63.56%), Postives = 92/118 (77.97%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            +EPVYL EIQ PE A+GGIY VLN++RGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP EP S+   +V D RKRKGLKE +  +S+Y DKL
Sbjct:  727 MEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844          
BLAST of CV712266 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 2.338e-38
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = -1
Query:  167 LEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPVSEYEDKL 520
            +EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RKRKGLKE +  +  + DKL
Sbjct:  741 MEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLDKL 858          
The following BLAST results are available for this feature:
BLAST of CV712266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
EF2_BETVU1.458e-5691.53Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE4.543e-5077.97Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_SCHPO6.575e-4169.23Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_CAEEL2.498e-4065.25Elongation factor 2 OS=Caenorhabditis elegans GN=e... [more]
EF2_YEAST1.619e-3966.67Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_KLULA4.712e-3964.10Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_CANGA8.037e-3965.81Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_ASHGO1.050e-3864.96Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_DROME2.338e-3863.56Elongation factor 2 OS=Drosophila melanogaster GN=... [more]
EF2_CRIGR2.338e-3861.86Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001C11_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712266 ID=CV712266; Name=CV712266; organism=Citrus sinensis; type=EST; length=871bp
TGAATGGAATAACAGAATTTGAACGTCCAAACTTAAATAAACAGAGGCTA
CAACAACAAACTCAGATAAGTCAACATTGTTTCCTTCAAAGAAAAAAACA
GAACAAAACCAAAGGCAGCAAAAAATGAATCTAGTCGCCAGCAATCGATA
ATGGCAAAAGCGCTTACAGCTTGTCTTCATATTCAGAGACGGGGGTCATC
TGTTCCTTCAAACCCTTCCTCTTCCTAATATCCAAAACAAGCTGTGAAGC
CTGGGATCCCGGCTCCAATGGATCAGATGACATCATGTCCCAGTGATCAA
ACACACATTGAGGGAATGCCTGTCCAGAGGTTGCAGCTCTCAAAGTGCTG
GAAAATCCAAAAGACTCAACGACCGGGAGGTATGCCTTGATGTTATAAAG
TGGGGTACCAGGTCTCTGCATCTCCTCAAAAACGTGACCACGTTTCTGGT
TAAGAACACTGTAAATACCACCAAGTGCCTGTTCAGGAGCTTGGATTTCC
ACCAAGTAGACAGGCTCAAGCTTGATCGCCTTGCATCTTTGCATATTGAT
TATCCAATGTTGTTTGAGCTACGTAATAATGCGGCTGAGCGGGTTTCCCA
CTGTGGAGTTCTTGAGTTTATTGCAGAGGAAGGCATGATCTATATGCCAT
ACTGGATGATGGAGAACCTGCTTTTACAAGAGGGAGATATTGTGCGAGTG
AAAAATGTGACACTTCCAAAGGGAACATATGTCAAACTTCAACCTCACAC
AAAGGACTTTCTCGATATTTCTAATCACAAAGCCATCTTGGAGACGACAT
TAAGGAATTATTCCTGCTTGACCACTGGGGACAGTATTATGGTGGCATAT
AACAATAAGAAATATTACATT
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