CX302456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_DICDI (Ribonucleoside-diphosphate reductase large subunit OS=Dictyostelium discoideum GN=rnrA PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.916e-72 Identity = 131/188 (69.68%), Postives = 158/188 (84.04%), Query Frame = 3 Query: 3 PSDRWHWNGLKQKI-EKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVDPTILRDSK 563 PS RW+W LK I K G+RNSLL+APMPTAST+QILGNNE EP+TSN+Y+RRVLAGEFT+VNK LL+DL+E GIWS +++NQI+A RGSIQ + IP D+KELYKTVWEI+Q+++ID AADRGAFI QSQS N+ + EPT A+LTSMHFY+W+KGLKTGMYYLRT P ADAIQFTVDP + + K Sbjct: 602 PSSRWNWAELKDNIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFTIVNKQLLEDLMELGIWSPEMKNQIVAARGSIQSIGGIPDDLKELYKTVWEIRQRTLIDMAADRGAFIDQSQSFNVFIAEPTFAKLTSMHFYSWKKGLKTGMYYLRTRPAADAIQFTVDPIVSQTPK 789
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_HUMAN (Ribonucleoside-diphosphate reductase large subunit OS=Homo sapiens GN=RRM1 PE=1 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 3.613e-71 Identity = 125/187 (66.84%), Postives = 154/187 (82.35%), Query Frame = 3 Query: 3 PSDRWHWNGLKQKIEKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVDPTILRDSK 563 P+D W W LK+KI KYGIRNSLL+APMPTASTAQILGNNES EP+TSN+Y RRVL+GEF +VN +LLKDL ERG+W E+++NQI+A GSIQ + IP D+K+LYKTVWEI QK+++ AA+RGAFI QSQSLNIH+ EP +LTSMHFY W++GLKTGMYYLRT P A+ IQFT++ L+D + Sbjct: 575 PTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_PONAB (Ribonucleoside-diphosphate reductase large subunit OS=Pongo abelii GN=RRM1 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 4.719e-71 Identity = 125/187 (66.84%), Postives = 154/187 (82.35%), Query Frame = 3 Query: 3 PSDRWHWNGLKQKIEKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVDPTILRDSK 563 P+D W W LK+KI KYGIRNSLL+APMPTASTAQILGNNES EP+TSN+Y RRVL+GEF +VN +LLKDL ERG+W E+++NQI+A GSIQ + IP D+K+LYKTVWEI QK+++ AA+RGAFI QSQSLNIH+ EP +LTSMHFY W++GLKTGMYYLRT P A+ IQFT++ L+D + Sbjct: 575 PTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_MOUSE (Ribonucleoside-diphosphate reductase large subunit OS=Mus musculus GN=Rrm1 PE=1 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 4.719e-71 Identity = 124/187 (66.31%), Postives = 155/187 (82.89%), Query Frame = 3 Query: 3 PSDRWHWNGLKQKIEKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVDPTILRDSK 563 P+D W W LK+KI KYGIRNSLL+APMPTASTAQILGNNES EP+TSN+Y RRVL+GEF +VN +LLKDL ERG+W+++++NQI+A GSIQ + IP D+K+LYKTVWEI QK+++ AA+RGAFI QSQSLNIH+ EP +LTSMHFY W++GLKTGMYYLRT P A+ IQFT++ L+D + Sbjct: 575 PTDLWDWKPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWNKEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_CAEEL (Ribonucleoside-diphosphate reductase large subunit OS=Caenorhabditis elegans GN=rnr-1 PE=1 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 8.050e-71 Identity = 122/187 (65.24%), Postives = 160/187 (85.56%), Query Frame = 3 Query: 3 PSDRWHWNGLKQKIEKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVDPTILRDSK 563 P+D+ W L++KI K+GIRNSLL+APMPTASTAQILGNNES EP+TSN+Y+RRVL+G+F +VN ++LKDLVERG+W+++++N+++A+ GSIQ + IP+DIKELY+TVWEI QK II+ AADRGA+I QSQSLNIHM +P+ A +TSMHFY W+KGLKTGMYYLRT P +A+QFTVD L+ ++ Sbjct: 581 PTDQCDWATLRKKIAKHGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHMLKDLVERGLWTDEMKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQKDIIEMAADRGAYIDQSQSLNIHMAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKNALKTNQ 767
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_DANRE (Ribonucleoside-diphosphate reductase large subunit OS=Danio rerio GN=rrm1 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.051e-70 Identity = 124/187 (66.31%), Postives = 155/187 (82.89%), Query Frame = 3 Query: 3 PSDRWHWNGLKQKIEKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVDPTILRDSK 563 P+D W W LK+KI G+RNSLLLAPMPTASTAQILGNNES EP+TSN+Y+RRVL+GEF +VN +LLKDL ERG+W+E+++NQI+A GSIQ + IP D+KELYKTVWEI QK+I+ AADRGA+I QSQSLNIH+ EP +LTSMHFY W++GLKTGMYYLRT P A+ IQFT++ L++++ Sbjct: 575 PTDLWDWAALKEKIANDGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYHRRVLSGEFQIVNPHLLKDLTERGLWNEEMKNQIIAQNGSIQTIPAIPDDLKELYKTVWEISQKTILKMAADRGAYIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPGANPIQFTLNKEKLKETQ 761
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_NEUCR (Ribonucleoside-diphosphate reductase large chain OS=Neurospora crassa GN=rnr-1 PE=1 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 2.192e-68 Identity = 124/184 (67.39%), Postives = 147/184 (79.89%), Query Frame = 3 Query: 3 PSDRWHWNGLKQKIEKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVDPTILR 554 P++ W W LK I+KYG+RNSLLLAPMPTAST+QILGNNE EP+TSN+Y RRVLAGEF VVN +LL+DLVE G+WS+ ++N+I+A+ GSIQ + IP DIK LYKTVWEI Q++I+ AADRGAFI QSQSLNIHM EPT ++TSMHF W+ GLKTGMYYLRT A IQFTVD LR Sbjct: 576 PTNLWDWTALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWLLRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAFIDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_SCHPO (Ribonucleoside-diphosphate reductase large chain OS=Schizosaccharomyces pombe GN=cdc22 PE=1 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 2.863e-68 Identity = 121/184 (65.76%), Postives = 151/184 (82.07%), Query Frame = 3 Query: 3 PSDRWHWNGLKQKIEKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVDPTILR 554 P+D W W LK+KI K+GIRNSLL+APMPTAST+QILG NE EP+TSNMY RRVL+GEF +VN +LLKDLVER +W+E ++N+++ GSIQ + IP D+K+LYKTVWEI QK++ID AADRG FI QSQSLNIH+ +P+ ++TSMHFY W+KGLKTGMYYLRT+ + AI+FTVDP LR Sbjct: 574 PTDLWDWAELKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWLLKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPFIDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALR 757
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_PLAF4 (Ribonucleoside-diphosphate reductase large subunit OS=Plasmodium falciparum (isolate Dd2) GN=RNR1 PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 4.884e-68 Identity = 123/182 (67.58%), Postives = 150/182 (82.42%), Query Frame = 3 Query: 15 WHWNGLKQKIEKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVDPTILRDS 560 W W+ LK KI K+G+RNSLLLAPMPTAST+QILGNNES EP+TSN+Y RRVL+GEF VVN +LLKDL +RG+W E ++ Q++A GSIQ +S IP D+KELYKTVWEIKQK+IID AADRG FI QSQSLNI++ +PT A+L+SMHFY W KGLKTG YYLRT DAI+FTVD + +++ Sbjct: 579 WDWDELKAKIRKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPHLLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGIFIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNA 760
BLAST of CX302456 vs. ExPASy Swiss-Prot
Match: RIR1_VACCW (Ribonucleoside-diphosphate reductase large subunit OS=Vaccinia virus (strain Western Reserve) GN=VACWR073 PE=3 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.203e-66 Identity = 122/192 (63.54%), Postives = 153/192 (79.69%), Query Frame = 3 Query: 3 PSDRWHWNGLKQKIEKYGIRNSLLLAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKYLLKDLVERGIWSEQVRNQIMADRGSIQRVSVIPADIKELYKTVWEIKQKSIIDQAADRGAFICQSQSLNIHMGEPTTARLTSMHFYAWRKGLKTGMYYLRTLPKADAIQFTVD-----PTILRDSK 563 PSD W+W LK KI YG+RNSLL+APMPTASTAQILGNNES EP+TSN+Y RRVL+GEF VVN +LL+ L ER +W+++++N+IMAD GSIQ + +P DIK +YKT+WEI QK+II AADRGAFI QSQS+NIH+ +P+ ++LTSMHFY W GLKTGMYYLRT P + IQFT+D P ++ DS+ Sbjct: 574 PSDLWNWEPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHLLRVLTERKLWNDEIKNRIMADGGSIQNTN-LPEDIKRVYKTIWEIPQKTIIKMAADRGAFIDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKPPVVCDSE 764 The following BLAST results are available for this feature:
BLAST of CX302456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX302456 ID=CX302456; Name=CX302456; organism=Citrus sinensis; type=EST; length=565bpback to top |