CX302433

Overview
NameCX302433
Unique NameCX302433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_NEMVE (Probable cytosolic iron-sulfur protein assembly protein OS=Nematostella vectensis GN=v1g226592 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.422e-36
Identity = 69/166 (41.57%), Postives = 106/166 (63.86%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG----DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIW 498
            TIK++     D D+W C  T+     GH ST+W++SF+  GD++VSCSDD T++IW +     Q G      +  W+ +C +SGYHDRTI+ VHWS+  G+IA+ + DD ++ F E  +   + PS++++  + KAH MDVNS+ W P +  +LA+ SDDG +K+W
Sbjct:  162 TIKLY---KEDEDDWSCCDTLE----GHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLW 320          
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila persimilis GN=Ciao1 PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.577e-35
Identity = 74/170 (43.53%), Postives = 108/170 (63.53%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG----DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELAN 510
            TIK++     DSD W C  T+S     H+ST+W++ F+A+GD+LVSCSDD T+KIW A      +G    D  + W+ +CT+SG H R I+ V W +  G+IA+G  DD ++ F E+ D   D P+++ L  +E AH+ DVN+V+W+P     L S SDDG IKIW++A+
Sbjct:  171 TIKMFAESQLDSD-WDCTATLSS----HTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVAD 335          
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_DROMO (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila mojavensis GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.691e-35
Identity = 75/168 (44.64%), Postives = 106/168 (63.10%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG----DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 504
            TIK++     DSD W C  T+S     H+ST+W++ F+A G++LVSCSDD T+KIW A     ++G    D    W+ +CT+SG H R I+ V W +  G+IAS   DD+++ F ES D   D PS+++L  +E AH+ DVN+V+W+P     L S SDDG IKIW+L
Sbjct:  167 TIKMYAESALDSD-WDCTATLSS----HTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNEAGIATPDKTTVWKCVCTLSGLHTRAIYDVSWCKLTGLIASACGDDAIRIFKESSDSKRDAPSFELLTSEESAHEQDVNAVEWNPVNVGQLISCSDDGTIKIWKL 329          
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_DROPS (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila pseudoobscura pseudoobscura GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.994e-35
Identity = 73/168 (43.45%), Postives = 106/168 (63.10%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG----DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 504
            TIK++     DSD W C  T+S     H+ST+W++ F+A+GD+LVSCSDD T+KIW A      +G    D  + W+ +CT+SG H R I+ V W +  G+IA+G  DD ++ F E+ D   D P+++ L  +E AH+ DVN+V+W+P     L S SDDG IKIW++
Sbjct:  171 TIKMFAESQLDSD-WDCTATLSS----HTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333          
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_DROYA (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila yakuba GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.744e-34
Identity = 74/168 (44.05%), Postives = 103/168 (61.31%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG----DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 504
            TIK++  E  D+D W C  T++     H+STIW + F+A G++LVSCSDD T+KIW A      +G    D    W+ +CT+SG H R I+ V W +  G+IA+   DD ++ F E+ D   D P+++ L  +E AHD DVNSVQW+P     L S SDDG IKIW++
Sbjct:  171 TIKMYAEEPIDND-WDCTATLTS----HTSTIWGIDFDADGERLVSCSDDTTVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQLTAEESAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333          
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_DROME (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila melanogaster GN=Ciao1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.744e-34
Identity = 73/168 (43.45%), Postives = 104/168 (61.90%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA----DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 504
            TIK++  E  D+D W C  T++     H+ST+W + F+A G++LVSCSDD TIKIW A    +   + + D    W+ +CT+SG H R I+ V W +  G+IA+   DD ++ F ES D   D P+++ +  +E AHD DVNSVQW+P     L S SDDG IKIW++
Sbjct:  171 TIKMFAEEPIDND-WDCTATLTS----HTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333          
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_DROER (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila erecta GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.744e-34
Identity = 75/168 (44.64%), Postives = 104/168 (61.90%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG----DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 504
            TIK++ AED   ++W C  T++     H+STIW + F+A G++LVSCSDD TIKIW A      +G    D    W+ +CT+SG H R I+ V W +  G+IA+   DD ++ F E+ D   D P+++ L  +E AHD DVNSVQW+P     L S SDDG IKIW++
Sbjct:  171 TIKMY-AEDPVDNDWDCTATLTS----HTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQLTAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333          
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_DROVI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila virilis GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34
Identity = 73/168 (43.45%), Postives = 104/168 (61.90%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG----DGYASWRHLCTISGYHDRTIFSVHWSRE-GIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 504
            TIK++     DSD W C  T+S     H+ST+W++ F+A G++LVSCSDD T+KIW A      +G    D    W+ +CT+SG H R I+ V W ++ G+IAS   DD ++ F E  D   D P++++L  +E AH+ DVN+V+W+P     L S SDDG IKIW+L
Sbjct:  167 TIKMFAESALDSD-WDCTATLSS----HTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNDAGIATPDKTTVWKCVCTLSGEHSRAIYDVSWCKQTGLIASACGDDGIRIFKECSDSKRDAPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKL 329          
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_DROGR (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila grimshawi GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34
Identity = 72/168 (42.86%), Postives = 104/168 (61.90%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGADITRMQSG----DGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWEL 504
            TIK++     DSD W C  T+S     H+ST+W++ F A G++LVSCSDD T+KIW A     ++G    D    W+ +CT++G H R ++ V W +  G+IAS   DD ++ F ES D   D P++++L  +E AH+ DVN+V+W+P     L S SDDG IKIW+L
Sbjct:  167 TIKMYAESALDSD-WDCTATLSS----HTSTVWSIDFEADGERLVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVWKCVCTVAGQHSRAVYDVSWCKLTGLIASACGDDGIRIFKESSDSKRDEPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKL 329          
BLAST of CX302433 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila simulans GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.656e-34
Identity = 71/169 (42.01%), Postives = 105/169 (62.13%), Query Frame = 1
Query:   16 TIKVWWAEDTDSDNWHCVQTISESNNGHSSTIWALSFNAKGDKLVSCSDDLTIKIWGA----DITRMQSGDGYASWRHLCTISGYHDRTIFSVHWSR-EGIIASGAADDSVQFFVESKDDLIDGPSYKMLLKKEKAHDMDVNSVQWSPGERRLLASASDDGMIKIWELA 507
            TIK++  E  D+D W C  T++     H+ST+W + F+A G++LVSCSDD TIKIW A    +   + + +    W+ +CT+SG H R I+ V W +  G+IA+   DD ++ F E+ D   D P+++ +  +E AHD DVNSVQW+P     L S SDDG IKIW+++
Sbjct:  171 TIKMFAEEPIDND-WDCTATLTS----HTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVS 334          
The following BLAST results are available for this feature:
BLAST of CX302433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CIAO1_NEMVE5.422e-3641.57Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROPE1.577e-3543.53Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROMO2.691e-3544.64Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROPS5.994e-3543.45Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROYA1.744e-3444.05Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROME1.744e-3443.45Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROER1.744e-3444.64Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROVI2.975e-3443.45Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROGR2.975e-3442.86Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROSI8.656e-3442.01Probable cytosolic iron-sulfur protein assembly pr... [more]

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Properties
Property NameValue
Genbank descriptionC08020F11SK PhyRootSw1 Citrus sinensis cDNA clone C08020F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302433 ID=CX302433; Name=CX302433; organism=Citrus sinensis; type=EST; length=676bp
AATTCGGCACGAGGCACTATTAAGGTCTGGTGGGCAGAGGATACTGATAG
TGATAATTGGCATTGCGTTCAAACCATAAGTGAATCTAACAATGGTCACT
CTTCTACCATCTGGGCCCTATCATTTAATGCCAAGGGAGACAAACTGGTT
AGCTGCAGTGATGATCTTACAATAAAGATATGGGGGGCGGACATTACAAG
GATGCAATCTGGTGATGGCTATGCATCTTGGAGACATCTTTGTACTATCT
CAGGTTATCATGATCGAACAATTTTTTCAGTTCACTGGTCAAGGGAAGGT
ATTATTGCCAGTGGAGCAGCTGATGATTCTGTACAATTCTTTGTGGAGAG
CAAAGATGATTTGATTGATGGACCTTCATATAAAATGCTGTTGAAGAAGG
AAAAGGCCCATGACATGGATGTCAATTCAGTGCAATGGAGCCCTGGGGAA
CGCCGGCTGCTGGCCTCTGCAAGTGATGATGGCATGATAAAGATATGGGA
GCTGGCAAATACGTTGTAACAGATGGCATAGTGGATTCTAGATTGGAAGC
TGGCAAAATCTGATACAACATTTTAACACTGTTTTAATTATTGTAGAGTT
TTTTAAACTTGTGATTATATAAAAGTTGTAGAAATGGCCTTCCATTTTGG
TTGAAAAAAAAAAAAAAAAAAAAAAA
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