CN192503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192503 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.819e-21 Identity = 47/106 (44.34%), Postives = 70/106 (66.04%), Query Frame = -3 Query: 412 TKEGSKADDELKKQRRPFLSQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSF 729 ++ G +LK + R ++ FSP+F+KAF++TF EWGD+SQ+ATI +AA +N +GV +G +G A CT AVI GK ++++I V GG+LFI FG+ F Sbjct: 177 SRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAFGLVYF 282
BLAST of CN192503 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 46/89 (51.69%), Postives = 65/89 (73.03%), Query Frame = -3 Query: 403 FFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 666 F SPIF++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AVIGG+ +A +IS + V + GG++F+ F + F+SP Sbjct: 231 FISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
BLAST of CN192503 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 46/89 (51.69%), Postives = 65/89 (73.03%), Query Frame = -3 Query: 403 FFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 666 F SPIF++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AVIGG+ +A +IS + V + GG++F+ F + F+SP Sbjct: 231 FISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
BLAST of CN192503 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 46/89 (51.69%), Postives = 65/89 (73.03%), Query Frame = -3 Query: 403 FFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 666 F SPIF++A ++TF EWGD+SQL TI LAA E+P+GV +GG +G LCT AVIGG+ +A +IS + V + GG++F+ F + F+SP Sbjct: 232 FISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 320
BLAST of CN192503 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17 Identity = 40/85 (47.06%), Postives = 60/85 (70.59%), Query Frame = -3 Query: 400 IFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSPV 654 I +++F++TF EWGD++Q+ATI LAA N +GV G I+G +C AV+GGK +A +ISEK V L GG+LF +F + S+ + + Sbjct: 121 IVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTVTLIGGLLFYLFAVVSWWTKI 205
BLAST of CN192503 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.338e-14 Identity = 35/88 (39.77%), Postives = 59/88 (67.05%), Query Frame = -3 Query: 421 RPFLSQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGI 684 R S FSP++++ F + F GE GD+SQ++ I +A D + + V+ G +IG A+C+ AV+GGK LA++IS + + L+ +LF +F + Sbjct: 182 RELASFMFSPVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFIFAL 269
BLAST of CN192503 vs. ExPASy Swiss-Prot
Match: YLY5_SCHPO (UPF0016 membrane protein C186.05c OS=Schizosaccharomyces pombe GN=SPAC186.05c PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.124e-12 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = -3 Query: 421 SQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGI 672 S+ FS F+KAF++ F E GD+SQ+ATI ++A E V +G IG LCT AVI G+ ++++I V GG++F++FGI Sbjct: 172 SKKFSRAFIKAFALIFVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFGGIVFMIFGI 255 The following BLAST results are available for this feature:
BLAST of CN192503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN192503 ID=CN192503; Name=CN192503; organism=Citrus sinensis; type=EST; length=779bpback to top |