CX302381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX302381 vs. ExPASy Swiss-Prot
Match: IFT88_MOUSE (Intraflagellar transport protein 88 homolog OS=Mus musculus GN=Ift88 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33 Identity = 76/216 (35.19%), Postives = 132/216 (61.11%), Query Frame = 3 Query: 45 IQTAFNLLLCLYARGDKDKLKKHFMKMLNIPIPGMTEEDEEKAMEHAHHAFGGSGSLKDALGGSNAGLDAVLNEKEDLLRNELHQRLETSNERVLTAARLIAPIIDEKNDWILGYRWVIDQLR-SDYEHVLSKFEIDLSMMYMKKRQFDEAITILKNFEKKDVSLRAIAGTNLSFIYFLEGDYAQAEKNADVAIKSDRYNAKALVNKGNCLFIAGE 689 ++ FNL+L +A GD++K+KK F K++ +P+ + E+D+ + H +N ++A+ K D LR +R + + ++TAA+LIAP+I+ + +GY W ++ ++ S Y + + EI+ ++ Y++++ F++A+ LK FEKKD +++ A TNLSF+Y+LE ++AQA AD+A+ SDRYN AL NKGN +F G+ Sbjct: 304 LKAGFNLILSCFAIGDREKMKKAFQKLIAVPLE-IDEDDKYISPSDDPH--------------TNLLIEAI---KNDHLRQMERERKAMAEKYIMTAAKLIAPVIEAS--FAVGYNWCVEVVKASQYVELANDLEINKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGD 499
BLAST of CX302381 vs. ExPASy Swiss-Prot
Match: IFT88_HUMAN (Intraflagellar transport protein 88 homolog OS=Homo sapiens GN=IFT88 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.226e-31 Identity = 72/217 (33.18%), Postives = 129/217 (59.45%), Query Frame = 3 Query: 42 DIQTAFNLLLCLYARGDKDKLKKHFMKMLNIPIPGMTEEDEEKAMEHAHHAFGGSGSLKDALGGSNAGLDAVLNEKEDLLRNELHQRLETSNERVLTAARLIAPIIDEKNDWILGYRWVIDQLR-SDYEHVLSKFEIDLSMMYMKKRQFDEAITILKNFEKKDVSLRAIAGTNLSFIYFLEGDYAQAEKNADVAIKSDRYNAKALVNKGNCLFIAGE 689 +++ +NL +C +A GD++K+KK F K++ +P+ E DE+K + + +N +A+ K D LR +R + + ++T+A+LIAP+I+ + GY W ++ ++ S Y + + EI+ ++ Y++++ +++A+ ILK EKKD +++ A TNLS +Y++ D+AQA AD+A+ SDRYN AL NKGN +F G+ Sbjct: 313 NLKAGYNLTICYFAIGDREKMKKAFQKLITVPL----EIDEDKYISPSDDPH------------TNLVTEAI---KNDHLRQMERERKAMAEKYIMTSAKLIAPVIE--TSFAAGYDWCVEVVKASQYVELANDLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAALTNKGNTVFANGD 508 The following BLAST results are available for this feature:
BLAST of CX302381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX302381 ID=CX302381; Name=CX302381; organism=Citrus sinensis; type=EST; length=696bpback to top |