EY716952

Overview
NameEY716952
Unique NameEY716952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY716952 vs. ExPASy Swiss-Prot
Match: MAF1_SOLLC (MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.595e-22
Identity = 53/86 (61.63%), Postives = 61/86 (70.93%), Query Frame = 2
Query:  470 TFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVK 727
            +F IWPP QRTRDAVI RLIE+L+TPS+LSKRYG +P DEA  TAR IE                GIE+LQVYSKEISKRM++ VK
Sbjct:   25 SFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFAAAGSTASDADDGIEILQVYSKEISKRMIDTVK 110          
BLAST of EY716952 vs. ExPASy Swiss-Prot
Match: WPP2_ARATH (WPP domain-containing protein 2 OS=Arabidopsis thaliana GN=WPP2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.186e-21
Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 2
Query:  347 PQQESKK-LDAINDIPQQESKKLDARNDIPQQESKKLNFSNLTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVK 727
            P+ ES   + A+ D   QE+   D   D+ ++   +     ++ RIWPP Q+TRDAV+ RLIETL+T S+LSKRYG + +D+A   A+ IE                GI++L++YSKEISKRMLE+VK
Sbjct:   17 PESESSTTISAMTDPTSQEAASKDT--DLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVK 142          
BLAST of EY716952 vs. ExPASy Swiss-Prot
Match: WPP1_ARATH (WPP domain-containing protein 1 OS=Arabidopsis thaliana GN=WPP1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.394e-19
Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 2
Query:  428 IPQQESKKL-NFSNLTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVK 727
            +P  E++K  N   ++ RIWPP Q+TRDAVI RLIETL+T S+LSKR+G++ ++EA   A+ IE+               GIE+L+ YSKEISKRMLE+VK
Sbjct:   26 LPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVK 126          
The following BLAST results are available for this feature:
BLAST of EY716952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MAF1_SOLLC5.595e-2261.63MFP1 attachment factor 1 OS=Solanum lycopersicum G... [more]
WPP2_ARATH6.186e-2142.97WPP domain-containing protein 2 OS=Arabidopsis tha... [more]
WPP1_ARATH3.394e-1950.50WPP domain-containing protein 1 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-073-D06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY716952 ID=EY716952; Name=EY716952; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTACATG
TGCGGTCACCCCTTCCCCTAGTATATAATTACAATCCGGTTCCGGTCCTC
CTCTCCTCGAGTCGACCTCGATATCCCCTTTTTTTTCGAAGAAAATAATA
TTAATAATATTAAAAATTTGAAAATTTGAAACTTCAAAATACAAATAGAT
AGAAATAGCAAATGTCCTCCGACTCTGAGATCGCCTCTGCCTCAGCCTCA
GCCACAGCCACAGCCACAGCCACACACCCAAACCGAATAGAGCAACAACA
GTCAATGGAAACCGAAACGCAGCTTCAAGCTTCTCAAAACGACATTCCCC
AGCAGGAATCAAAGAAACTCGACGCCATAAACGACATTCCCCAGCAGGAA
TCAAAGAAACTCGACGCCAGAAACGACATTCCCCAGCAGGAATCAAAGAA
ACTCAACTTCAGCAACCTGACCTTCCGCATATGGCCACCCGCACAGCGCA
CGCGCGACGCGGTGATCGCTCGCCTTATCGAGACTCTCACCACTCCCTCC
GTTCTCTCCAAACGCTACGGCGCCATGCCGACGGACGAGGCCGATTTCAC
TGCCCGCTTCATTGAGAACGATGCCTTTTCCGTCGCCGATGCCGCCGCCT
CTGCTGAGGACGATGGTATCGAGGTCCTTCAGGTCTATTCCAAAGAGATC
AGCAAGCGCATGCTCGAAGCCGTGAAGTCACGCTCTTCTGCTGCTGGCTC
TGGATCTCTAGTGGTGTAGATGATACAACAGTCCTGCTCACCCTGCGGAG
GTCCAAGAGGAATCTGTTTCGTCTTCTGTGAGACGGAGGGTGATTTTCTC
CTCTAGCCTCCATATTTTTAGCGGTATTTTCTTTAAAATAATATGTTATG
TAGGGTTC
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