CX302190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX302190 vs. ExPASy Swiss-Prot
Match: ALG13_HUMAN (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo sapiens GN=ALG13 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.961e-23 Identity = 60/163 (36.81%), Postives = 89/163 (54.60%), Query Frame = 3 Query: 150 RIVF*TVGTTCFDALVKAADTLEVKQELTRTGYAHLLIQMGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLG 638 + VF TVGTT FD L+ + Q++ GY L++Q+G+GT +P E +D + + VISHAG+GS ETL GKPL+VV+NE LM+NHQ ELA++L HL+ +L ++ MDL +L Y PG + +++ +G Sbjct: 2 KCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTES--FTLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLFYCTCSTLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKVVG 162
BLAST of CX302190 vs. ExPASy Swiss-Prot
Match: ALG13_MOUSE (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus musculus GN=Alg13 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.505e-22 Identity = 62/160 (38.75%), Postives = 87/160 (54.37%), Query Frame = 3 Query: 159 F*TVGTTCFDALVKAADTLEVKQELTRTGYAHLLIQMGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLG 638 F TVGTT FD LV + Q L GY HL++Q+G+GT +P E +D + + VISHAG+GS E+L GKPL+VVVNE LM+NHQ ELA++L HL+ +L ++ MDL +L Y PG + +++ +G Sbjct: 5 FVTVGTTSFDELVARVVANDCVQILESLGYNHLVLQVGRGTVVPKPFRTES--FTLDVYRYKDSLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLHKEGHLFYCTCSTLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKVVG 162
BLAST of CX302190 vs. ExPASy Swiss-Prot
Match: ALG13_RAT (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus norvegicus GN=Alg13 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.568e-22 Identity = 62/160 (38.75%), Postives = 86/160 (53.75%), Query Frame = 3 Query: 159 F*TVGTTCFDALVKAADTLEVKQELTRTGYAHLLIQMGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRFLG 638 F TVGTT FD LV + Q L GY HL++Q+G+GT +P E +D + + VISHAG+GS E+L GKPL+VVVNE LM+NHQ ELA++L HL+ L ++ MDL +L Y PG + +++ +G Sbjct: 5 FVTVGTTSFDDLVARVVANDTVQILKSLGYNHLVLQIGRGTVVPEPFSTEP--FTLDVYRYKESLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLHKEGHLFYCTCSMLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKVVG 162
BLAST of CX302190 vs. ExPASy Swiss-Prot
Match: ALG13_SCHPO (UDP-N-acetylglucosamine transferase subunit alg13 OS=Schizosaccharomyces pombe GN=alg13 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.105e-16 Identity = 56/155 (36.13%), Postives = 80/155 (51.61%), Query Frame = 3 Query: 159 F*TVGTTCFDALVKAADTLEVKQELTRTGYAHLLIQMGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLI 623 F TVG+T FD L++A E + L + G L++Q G+G + GL + F + VISHAG+GSI +TLR GK L+VV NE LMDNHQ ELA +LA +L +L + + + K L P+ D + K++ Sbjct: 4 FVTVGSTQFDDLIRAVLKPEFQHCLVKHGINQLIVQYGKGKQAFGDPKSVAGLTILG-FDYAPEIESYIHDASIVISHAGAGSILQTLRSGKRLLVVPNESLMDNHQVELATKLASMNYLVTCSTSNLVEGLEELYPKILTPFPKSDCSTFQKVM 157
BLAST of CX302190 vs. ExPASy Swiss-Prot
Match: ALG13_YARLI (UDP-N-acetylglucosamine transferase subunit ALG13 OS=Yarrowia lipolytica GN=ALG13 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.846e-15 Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 165 TVGTTCFDALVKAADTLEVKQELTRTGYAHLLIQMGQGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 518 T GT F+AL++ + E L++ G++ + +Q G+G ++G++++ F + VISHAG+GS+ + LR+GK +VVVN LMDNHQ E+AEEL ++HL Sbjct: 34 TGGTVPFEALIELVLSHESITTLSQLGFSKMRVQYGRGNRHIFTKHHKEGVMSITGFEYTDDLAGEMSRAHLVISHAGTGSVLDALRIGKHPVVVVNSKLMDNHQIEIAEELFRKRHL 151 The following BLAST results are available for this feature:
BLAST of CX302190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX302190 ID=CX302190; Name=CX302190; organism=Citrus sinensis; type=EST; length=784bpback to top |