CX302189

Overview
NameCX302189
Unique NameCX302189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX302189 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 3.499e-24
Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 1 
Query:   16 STVWKLDNFDTAFGQWLVTTGGVEGNPGPRTMRNWFKIEKFYGD--YKLVFCPSVCNFCRGLCRDVGIFIN-GGVRRLALSDVPLKVVFKK 279
            STVW+LD +D + GQ+ VT GGV+GNPGP T+ +WFKIE+F G   YKLVFCP+VC  C+  C DVGI+I+  G RRLALSD P    F K
Sbjct:  126 STVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAFEFNK 216
[Close]
BLAST of CX302189 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.347e-20
Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 1 
Query:    7 CAQSTVWKLDNFDTAFGQWLVTTGGVEGNPGPRTMRNWFKIEKF-YGDYKLVFCPSVCNFCRGLCRDVGIFI-NGGVRRLALSDVPLKVVFKK 279
            C+ STVW+LDN+D + G+W VTT GV+G PGP T+ +WFKIEK     YK  FCPSVC+ C  LC D+G    + G  RLALSD     +FKK
Sbjct:  116 CSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNEWAWMFKK 208
The following BLAST results are available for this feature:
BLAST of CX302189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MIRA_RICDU3.499e-2459.34Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC2.347e-2053.7621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
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Properties
Property NameValue
Genbank descriptionC08018B01SK PhyRootSw1 Citrus sinensis cDNA clone C08018B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302189 ID=CX302189; Name=CX302189; organism=Citrus sinensis; type=EST; length=514bp
ACAAGTTGTGCGCAGTCCACAGTGTGGAAGCTTGACAATTTTGATACGGC
ATTTGGGCAGTGGCTTGTGACAACTGGGGGAGTTGAAGGCAATCCCGGCC
CCAGAACCATGAGAAATTGGTTTAAGATTGAGAAGTTTTATGGCGATTAC
AAGCTTGTTTTCTGTCCTTCGGTTTGTAATTTCTGCAGAGGTTTGTGCAG
AGATGTTGGCATTTTTATTAATGGTGGGGTGCGGCGTCTGGCTTTGAGTG
ATGTTCCGTTAAAAGTTGTGTTTAAAAAGGTTTGAAGATCGAGCTGCTGA
GAGGTCCGCAAATGCTTGCAGTTAAAAATAAAGTTTGTTTCGTTTTAGGG
TTGTACGCATGCTTTAATAAATGAATAACTAAGTTGTAATAATAAAAGTT
GCACGAACGTTGCACGTTTACGAATAATAAAAACTTTTCTTCATGTTGGT
ATTTTGGTTCATCATTTTCCTCATTAGTGCCAACATTTTCATTTCAAAAA
AAAAAAAAAAAAAA
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