CN192033

Overview
NameCN192033
Unique NameCN192033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: U0468_DROME (UPF0468 protein CG5343 OS=Drosophila melanogaster GN=CG5343 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.209e-68
Identity = 116/140 (82.86%), Postives = 133/140 (95.00%), Query Frame = -2 
Query:  313 VGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQK 732
            VG NV +T+ITCP DP  TLGIKLPFLVMI+KN+KKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLD+GWNQIQ NL+DFTRRAYGTNYVETLRVQ+HANCR+RR+YFSDRLYSE+ELPPEFKL+LP+QK
Sbjct:   50 VGTNVSTTFITCPADPKKTLGIKLPFLVMIIKNMKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQIHANCRIRRVYFSDRLYSEDELPPEFKLFLPIQK 189
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: CP080_XENTR (UPF0468 protein C16orf80 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.806e-67
Identity = 116/138 (84.06%), Postives = 130/138 (94.20%), Query Frame = -2 
Query:  316 GPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 729
            G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:   51 GTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: CP080_XENLA (UPF0468 protein C16orf80 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.806e-67
Identity = 116/138 (84.06%), Postives = 130/138 (94.20%), Query Frame = -2 
Query:  316 GPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 729
            G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:   51 GTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: CP080_MOUSE (UPF0468 protein C16orf80 homolog OS=Mus musculus GN=Gtl3 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.806e-67
Identity = 116/138 (84.06%), Postives = 130/138 (94.20%), Query Frame = -2 
Query:  316 GPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 729
            G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:   51 GTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: CP080_DANRE (UPF0468 protein C16orf80 homolog OS=Danio rerio GN=zgc:73380 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.806e-67
Identity = 116/138 (84.06%), Postives = 130/138 (94.20%), Query Frame = -2 
Query:  316 GPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 729
            G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:   51 GTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: CP080_CHICK (UPF0468 protein C16orf80 homolog OS=Gallus gallus GN=RCJMB04_34o2 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.806e-67
Identity = 116/138 (84.06%), Postives = 130/138 (94.20%), Query Frame = -2 
Query:  316 GPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 729
            G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:   51 GTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: CP080_BOVIN (UPF0468 protein C16orf80 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.806e-67
Identity = 116/138 (84.06%), Postives = 130/138 (94.20%), Query Frame = -2 
Query:  316 GPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 729
            G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:   51 GTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: CP080_HUMAN (UPF0468 protein C16orf80 OS=Homo sapiens GN=C16orf80 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.081e-67
Identity = 116/138 (84.06%), Postives = 129/138 (93.48%), Query Frame = -2 
Query:  316 GPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 729
            G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:   51 GTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: CP080_CAEBR (UPF0468 protein C16orf80 homolog OS=Caenorhabditis briggsae GN=CBG09753 PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.793e-60
Identity = 96/139 (69.06%), Postives = 127/139 (91.37%), Query Frame = -2 
Query:  316 VGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 732
            +G N+ + +I+CP+DP  TLGIKLPF VM+VKN+ KYF+FE+Q++DDK ++RRFRASN+Q+ TRVKP+ICTMP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HANCR+RR+YF+DRLY+E+ELP EFKLYLP++
Sbjct:   50 MGNNISTAFISCPVDPEKTLGIKLPFFVMVVKNMNKYFSFEVQIIDDKKIKRRFRASNYQSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFADRLYTEDELPAEFKLYLPIR 188
[Close]
BLAST of CN192033 vs. ExPASy Swiss-Prot
Match: CP080_CAEEL (UPF0468 protein C16orf80 homolog OS=Caenorhabditis elegans GN=C54C6.6 PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.648e-60
Identity = 96/139 (69.06%), Postives = 127/139 (91.37%), Query Frame = -2 
Query:  316 VGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 732
            +G N+ + +I+CP+DP  TLGIKLPF VM+VKN+ KYF+FE+Q++DDK ++RRFRASN+Q+ TRVKP+ICTMP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HANCR+RR+YF+DRLY+E+ELP EFKLYLP++
Sbjct:   50 MGNNISTAFISCPVDPDKTLGIKLPFFVMVVKNMNKYFSFEVQIIDDKKIKRRFRASNYQSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFADRLYTEDELPAEFKLYLPIR 188
The following BLAST results are available for this feature:
BLAST of CN192033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
U0468_DROME6.209e-6882.86UPF0468 protein CG5343 OS=Drosophila melanogaster ... [more]
CP080_XENTR1.806e-6784.06UPF0468 protein C16orf80 homolog OS=Xenopus tropic... [more]
CP080_XENLA1.806e-6784.06UPF0468 protein C16orf80 homolog OS=Xenopus laevis... [more]
CP080_MOUSE1.806e-6784.06UPF0468 protein C16orf80 homolog OS=Mus musculus G... [more]
CP080_DANRE1.806e-6784.06UPF0468 protein C16orf80 homolog OS=Danio rerio GN... [more]
CP080_CHICK1.806e-6784.06UPF0468 protein C16orf80 homolog OS=Gallus gallus ... [more]
CP080_BOVIN1.806e-6784.06UPF0468 protein C16orf80 homolog OS=Bos taurus PE=... [more]
CP080_HUMAN3.081e-6784.06UPF0468 protein C16orf80 OS=Homo sapiens GN=C16orf... [more]
CP080_CAEBR2.793e-6069.06UPF0468 protein C16orf80 homolog OS=Caenorhabditis... [more]
CP080_CAEEL3.648e-6069.06UPF0468 protein C16orf80 homolog OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006D21_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192033 ID=CN192033; Name=CN192033; organism=Citrus sinensis; type=EST; length=733bp
TTTTTTTTTTTTTTTTTGAACAAGCTCAACTGGATAGCATAAACAGTTCA
AGCGCATCTCTTAGTATTAATACACACCTGAAAGTTCCCTGTAACGAACA
GGCTAAACCACATTCTAGTCATCCTGCTACTGCGTAGATCGATCAAATTC
TAGATATTTTTAGTTCCTTCTTTTCATATCATAAAATCTTACAAAACAAC
TCAGATAAAACTGAGTCAGCTACTAAGAATAGCATATAGCATATAGAATC
TGAAAACCCAGCTATTTCACGATAATTGCACGTGTGAAGCTCTCCTCCCT
TGAAAGTTATGTTTTCTGCATTGGAAGGTACAGCTTAAATTCCGGTGGGA
GTTCTTCTTCCGAGTACAGGCGATCCGAGAAATATATCCTTCTGAGGCGA
CAGTTTGCATGAACCTGAACTCGTAAAGTTTCAACGTAGTTGGTTCCATA
TGCTCTCCTGGTAAAATCAGCCAGGTTCAACTGGATCTGATTCCAGCCAT
CATCCAACCTCAGTGGCATGGTGCAAATATATGGCTTCACCCGTGTAACA
GCTTGGAAGTTAGAAGCTCGAAAACGCCGACGGACATTTTTATCATCCAG
TACTTGAATCTCAAATGTGAAATATTTCTTCAGGTTCTTGACAATCATAA
CCAAAAATGGGAGTTTTATACCAAGAGTTGCTGCTGGGTCTATGGGGCAT
GTAATGTATGTAGATTGTACATTTGGCCCAACT
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