CX301813

Overview
NameCX301813
Unique NameCX301813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4982 contig Csv1_Contig4982:1..687. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDIA1_RAT (Protein disulfide-isomerase OS=Rattus norvegicus GN=P4hb PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.726e-45
Identity = 92/222 (41.44%), Postives = 138/222 (62.16%), Query Frame = 3
Query:   21 RVQQFALANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVP---TSEQRILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            ++  F   N  PL+ EF+++++ KIF  +++ H L F  K+   +   ++ F++ A  +KG+ LF+ +    T  QRIL+FF +K  + PA  L  L  E  M KY P + E T + +  F   F +GK+KPHL ++E+  D     V VL GK+F+E+  D  K+V VEFYAPWCGHCK+LAP W++LG+ +K + N+VIAK+DSTANE++   V V  FP
Sbjct:  226 KLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKKAAEGFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE--MTKYKPESDELTAEKITQFCHHFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVE--AVKVHSFP 443          
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDIA1_BOVIN (Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.726e-45
Identity = 92/222 (41.44%), Postives = 139/222 (62.61%), Query Frame = 3
Query:   21 RVQQFALANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVP---TSEQRILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            ++  F   N  PL+ EF+++++ KIF  +++ H L F  K+   +   ++ F++ A ++KG+ LF+ +    T  QRIL+FF +K  + PA  L  L  E  M KY P + E T + +  F   F +GK+KPHL ++E+  D     V VL GK+F+E+  D  K+V VEFYAPWCGHCK+LAP W++LG+ +K + N+VIAK+DSTANE++   V V  FP
Sbjct:  226 KLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYEGKLSNFKKAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE--MTKYKPESDELTAEKITEFCHRFLEGKIKPHLMSQELPDDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVE--AVKVHSFP 443          
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDIA1_RABIT (Protein disulfide-isomerase OS=Oryctolagus cuniculus GN=P4HB PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.255e-45
Identity = 91/222 (40.99%), Postives = 140/222 (63.06%), Query Frame = 3
Query:   21 RVQQFALANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVPTSE---QRILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            ++  F   N  PL+ EF+++++ KIF  +++ H L F  +++  H   ++ F++ A  +KG+ LF+ + +     QRIL+FF +K  + PA  L  L  E  M KY P + E T + +  F Q F +GK+KPHL ++E+  D     V VL GK+F+E+  D  K+V VEFYAPWCGHCK+LAP W++LG+ +K + ++VIAK+DSTANE++   V V  FP
Sbjct:  225 KLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPRSAADHDGKLSGFKQAAEGFKGKILFIFIDSDHADNQRILEFFGLKKEECPAVRLITLEEE--MTKYKPESDELTAEGITEFCQRFLEGKIKPHLMSQELPEDWDRQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKEHQDIVIAKMDSTANEVE--AVKVHSFP 442          
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.846e-45
Identity = 91/218 (41.74%), Postives = 137/218 (62.84%), Query Frame = 3
Query:   33 FALANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVP---TSEQRILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            F   N  PL+ EF+++++ KIF  +++ H L F  K+   +   ++ F+  A ++KG+ LF+ +    T  QRIL+FF +K  + PA  L  L  E  M KY P + E T + +  F   F +GK+KPHL ++E+  D     V VL GK+F+E+  D +K+V VEFYAPWCGHCK+LAP W++LG+ +K + N+VIAK+DSTANE++   + V  FP
Sbjct:  230 FIKYNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE--MTKYKPESDELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVE--AIKVHSFP 443          
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDIA1_CRIGR (Protein disulfide-isomerase OS=Cricetulus griseus GN=P4HB PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.846e-45
Identity = 91/222 (40.99%), Postives = 137/222 (61.71%), Query Frame = 3
Query:   21 RVQQFALANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVP---TSEQRILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            ++  F   N  PL+ EF+++++ KIF  +++ H L F  K+   +   +  F++ A  +KG+ LF+ +    T  QRIL+FF +K  + PA  L  L  E  M KY P + E T + +  F   F +GK+KPHL ++E+  D     V VL GK+F+E+  D  K+V VEFYAPWCGHCK+LAP W++LG+ +K + N++IAK+DSTANE++   V V  FP
Sbjct:  226 KLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLGNFKKAAEGFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE--MTKYKPESDELTAEKITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEVE--AVKVHSFP 443          
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDIA1_MOUSE (Protein disulfide-isomerase OS=Mus musculus GN=P4hb PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45
Identity = 91/222 (40.99%), Postives = 137/222 (61.71%), Query Frame = 3
Query:   21 RVQQFALANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVP---TSEQRILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            ++  F   N  PL+ EF+++++ KIF  +++ H L F  K+   +   +++F+  A  +KG+ LF+ +    T  QRIL+FF +K  + PA  L  L  E  M KY P + E T + +  F   F +GK+KPHL ++EV  D     V VL G +F+E+  D  K+V VEFYAPWCGHCK+LAP W++LG+ +K + N++IAK+DSTANE++   V V  FP
Sbjct:  226 KLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSSFKRAAEGFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE--MTKYKPESDELTAEKITEFCHRFLEGKIKPHLMSQEVPEDWDKQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEVE--AVKVHSFP 443          
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDIA1_CHICK (Protein disulfide-isomerase OS=Gallus gallus GN=P4HB PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45
Identity = 89/218 (40.83%), Postives = 137/218 (62.84%), Query Frame = 3
Query:   33 FALANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVPTSE---QRILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            F  +N  PL+ EF+++++ KIF  +++ H L F  K+   +   +  F+  A  +KG+ LF+ + +     QRIL+FF +K  + PA  L  L  E  M KY P + + T D +K F   F +GK+KPHL ++++  D     V VL GK+F+E+  D +K+V VEFYAPWCGHCK+LAP W++LG+ ++ + N+VIAK+DSTANE++   V +  FP
Sbjct:  233 FIKSNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYEGKLDNFKTAAGNFKGKILFIFIDSDHSDNQRILEFFGLKKEECPAVRLITLEEE--MTKYKPESDDLTADKIKEFCNKFLEGKIKPHLMSQDLPEDWDKQPVKVLVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYRDHENIVIAKMDSTANEVE--AVKIHSFP 446          
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDIA1_HUMAN (Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=1 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 1.462e-44
Identity = 91/218 (41.74%), Postives = 136/218 (62.39%), Query Frame = 3
Query:   33 FALANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVP---TSEQRILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            F   N  PL+ EF+++++ KIF  +++ H L F  K+   +   ++ F+  A ++KG+ LF+ +    T  QRIL+FF +K  + PA  L  L  E  M KY P + E T + +  F   F +GK+KPHL ++E+  D     V VL GK+F+++  D  K+V VEFYAPWCGHCK+LAP W++LG+ +K + N+VIAK+DSTANE++   V V  FP
Sbjct:  228 FIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE--MTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVE--AVKVHSFP 441          
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDIA1_PONAB (Protein disulfide-isomerase OS=Pongo abelii GN=P4HB PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.909e-44
Identity = 91/218 (41.74%), Postives = 136/218 (62.39%), Query Frame = 3
Query:   33 FALANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVP---TSEQRILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            F   N  PL+ EF+++++ KIF  +++ H L F  K+   +   ++ F+  A ++KG+ LF+ +    T  QRIL+FF +K  + PA  L  L  E  M KY P + E T + +  F   F +GK+KPHL ++E+  D     V VL GK+F+++  D  K+V VEFYAPWCGHCK+LAP W++LG+ +K + N+VIAK+DSTANE++   V V  FP
Sbjct:  228 FIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE--MTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPDDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVE--AVKVHSFP 441          
BLAST of CX301813 vs. ExPASy Swiss-Prot
Match: PDI2_CAEEL (Protein disulfide-isomerase 2 OS=Caenorhabditis elegans GN=pdi-2 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.909e-44
Identity = 90/215 (41.86%), Postives = 136/215 (63.26%), Query Frame = 3
Query:   42 ANSSPLIQEFSQESSKKIFSSQVQKHFLFFTNKASEHHASTIATFREVAAAYKGQALFVNVPTSEQ---RILDFFEIKATDVPAAILADLGNESGMKKY-PFNGEYTVDSLKSFVQDFFDGKLKPHLKTEEVSADDTTGDVVVLRGKSFKEIVLDNDKDVLVEFYAPWCGHCKKLAPTWEELGQHFKSNSNVVIAKIDSTANEIDVPGVAVRGFP 674
            AN   L+ EF+QE++  IF  +++ H L F +K S   A     F+  A  +KG+ LFV + T  +   RI++FF +K  ++PA  L  L  E  M K+ P   E T +++  F Q++ DG +KPHL +E++  D     V +L GK+F+++  DN K+VLVEFYAPWCGHCK+LAPTW++LG+ F  + ++VIAK+DST NE++   V ++ FP
Sbjct:  227 ANRLALVSEFTQETASVIFGGEIKSHNLLFVSKESSEFAKLEQEFKNAAKQFKGKVLFVYINTDVEENARIMEFFGLKKDELPAIRLISL--EEDMTKFKPDFEEITTENISKFTQNYLDGSVKPHLMSEDIPEDWDKNPVKILVGKNFEQVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVE--DVKIQSFP 437          
The following BLAST results are available for this feature:
BLAST of CX301813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
PDIA1_RAT1.726e-4541.44Protein disulfide-isomerase OS=Rattus norvegicus G... [more]
PDIA1_BOVIN1.726e-4541.44Protein disulfide-isomerase OS=Bos taurus GN=P4HB ... [more]
PDIA1_RABIT2.255e-4540.99Protein disulfide-isomerase OS=Oryctolagus cunicul... [more]
PDIA1_MACFU3.846e-4541.74Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_CRIGR3.846e-4540.99Protein disulfide-isomerase OS=Cricetulus griseus ... [more]
PDIA1_MOUSE6.561e-4540.99Protein disulfide-isomerase OS=Mus musculus GN=P4h... [more]
PDIA1_CHICK6.561e-4540.83Protein disulfide-isomerase OS=Gallus gallus GN=P4... [more]
PDIA1_HUMAN1.462e-4441.74Protein disulfide-isomerase OS=Homo sapiens GN=P4H... [more]
PDIA1_PONAB1.909e-4441.74Protein disulfide-isomerase OS=Pongo abelii GN=P4H... [more]
PDI2_CAEEL1.909e-4441.86Protein disulfide-isomerase 2 OS=Caenorhabditis el... [more]

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Properties
Property NameValue
Genbank descriptionC08013H04SK PhyRootSw1 Citrus sinensis cDNA clone C08013H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301813 ID=CX301813; Name=CX301813; organism=Citrus sinensis; type=EST; length=687bp
CTCGTGCCGAATTCGGCACGAGGGTCCAACAATTCGCCCTCGCTAACTCC
TCTCCATTAATCCAAGAGTTCTCTCAGGAATCCTCCAAGAAGATCTTTAG
CTCCCAGGTCCAGAAGCATTTCCTCTTCTTCACTAACAAGGCCAGCGAGC
ATCATGCTTCAACTATTGCCACCTTCCGTGAAGTCGCTGCTGCTTACAAG
GGTCAAGCTCTCTTCGTTAATGTTCCTACCTCTGAACAGAGAATCCTTGA
TTTCTTTGAGATCAAGGCCACTGATGTTCCTGCTGCCATCTTAGCCGATT
TAGGTAACGAGTCAGGAATGAAGAAGTACCCATTCAATGGTGAATACACT
GTTGATTCGCTCAAGTCATTCGTTCAAGATTTCTTCGATGGAAAGCTTAA
GCCACACTTAAAGACTGAAGAAGTGTCTGCTGATGACACCACTGGTGACG
TGGTTGTCTTACGTGGAAAGTCCTTCAAGGAGATCGTCCTTGACAACGAC
AAGGATGTCTTGGTCGAGTTCTATGCTCCTTGGTGTGGTCACTGCAAGAA
GTTAGCTCCAACATGGGAAGAGCTCGGTCAACACTTCAAGTCAAACAGCA
ACGTTGTCATCGCCAAGATTGATTCCACTGCCAATGAAATTGATGTCCCA
GGAGTCGCTGTCCGTGGTTTCCCACCATCTACTTCTT
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