CX301802 | Citrus Genome Database

Overview


Name	CX301802
Unique Name	CX301802
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	726

Libraries


Library Name	Type
PhyRootSw1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig7970	contig	Csv1_Contig7970:294..1017.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

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BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.315e-46
Identity = 92/152 (60.53%), Postives = 112/152 (73.68%), Query Frame = 2

Query:    2 TLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGP 457
            TLVNPCTWFH+TCN +N V R+DLGN+ LSG LVPELG L++LQYLELY NNI G IP  LGNL +L+SLDLY N+ SG IP SL KL  L FLRLN+N LTG IP  L  I++L+V+D+S+N L G++P +G F      +F NN  L GP
Sbjct:   53 TLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLCGP 204

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BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.315e-46
Identity = 89/145 (61.38%), Postives = 112/145 (77.24%), Query Frame = 2

Query:    2 TLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFEN 436
            TLV PCTWFH+TCN DN VTR+DLGN+NLSG+LV +LG+L +LQYLELY NNI GTIP +LGNL  L+SLDLY NN+SG IP +L +LK L FLRLN+N L+G+IPR L  + +L+V+D+S+N L G IP +G F      +F N
Sbjct:   52 TLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFAN 196

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BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.526e-46
Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 2

Query:    2 TLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGP 457
            TLVNPCTWFH+TCN +N V R+DLGN++LSG+LVP+LG+L++LQYLELY NNI G +P +LGNL +L+SLDLY N+ +G IP SL KL  L FLRLN+N LTG IP  L  I +L+V+D+S+N L G++P +G F      +F NN  L GP
Sbjct:   56 TLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLCGP 207

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BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.524e-45
Identity = 91/153 (59.48%), Postives = 113/153 (73.86%), Query Frame = 2

Query:    2 TLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPE 460
            TLV PCTWFH+TCN +N+VTR+DLGN+ LSG+LVPELG+L +LQYLELY NNI G IP ELG+L  L+SLDLY N+ISG IP SL KL  L FLRLN+N L+G+IP  L  +  L+V+D+S+N L G IP +G F      +F NN   + PE
Sbjct:   59 TLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSV-QLQVLDISNNRLSGDIPVNGSFSLFTPISFANNSLTDLPE 210

[Close]

BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.717e-42
Identity = 88/155 (56.77%), Postives = 109/155 (70.32%), Query Frame = 2

Query:    2 TLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN---PRLEGP 457
            T V PC+WFH+TCN +N VTRLDLG++NLSG LVP+L +L +LQYLEL+ NNI G IP ELG+L  L+SLDL+ NNISG IP SL KL  L FLRL +N L+G+IPR L  +  L V+D+S+N L G IP +G F      +F NN   PR   P
Sbjct:   54 THVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVNGSFSQFTSMSFANNKLRPRPASP 207

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BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26
Identity = 66/144 (45.83%), Postives = 86/144 (59.72%), Query Frame = 2

Query:    8 VNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 439
            VNPCTW  + C+  N VT L L + N SG L   +G LE+L+ L L  N I G IP + GNL SL SLDL +N ++G+IP ++  LK L FL L+ N+L G IP  L G+ +L  + + SN L G IP S     IP  NF +N
Sbjct:   56 VNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQS--LFEIPKYNFTSN 197

[Close]

BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24
Identity = 67/157 (42.68%), Postives = 88/157 (56.05%), Query Frame = 2

Query:   14 PCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS--GPFEHIPLNNFENNPRLEGPELLGLAS 478
            PC WF ITC+    V  L+   S +SG+L PE+G+L+ LQ L+L  NN  GTIP  LGN   L +LDL  N  S KIP +L  LK L  L L  N LTG++P  L  I  L+V+ +  N+L G IP S     E + L+ + N      PE +G +S
Sbjct:   63 PCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRLEVLYLYINFLTGELPESLFRIPKLQVLYLDYNNLTGPIPQSIGDAKELVELSMYANQFSGNIPESIGNSS 219

HSP 2 Score: 83.5741 bits (205), Expect = 1.200e-15
Identity = 44/114 (38.60%), Postives = 69/114 (60.53%), Query Frame = 2

Query:   56 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 397
            + R  L  +NLSG L+PE  +   L +L+   NN +G IP  LG+ K+L S++L  N  +G+IPP L  L++L ++ L+ N L G +P +L    SL+  DV  N L G++P++
Sbjct:  485 IRRFILRENNLSG-LLPEFSQDHSLSFLDFNSNNFEGPIPGSLGSCKNLSSINLSRNRFTGQIPPQLGNLQNLGYMNLSRNLLEGSLPAQLSNCVSLERFDVGFNSLNGSVPSN 597

HSP 3 Score: 83.1889 bits (204), Expect = 1.568e-15
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 2

Query:   56 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 397
            +T L +GN++L G +       ++L  L+L  N  +G +P  LGN  SL +L + + N+SG IP SL  LK+L  L L++NRL+G IP EL   SSL ++ ++ N L G IP++
Sbjct:  245 LTTLFVGNNSLQGPVRFGSPNCKNLLTLDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSA 358

HSP 4 Score: 81.6481 bits (200), Expect = 4.561e-15
Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 2

Query:   56 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            +T L+L  + LSG +  ELG    L  L+L  N + G IP  LG L+ L SL+L+ N  SG+IP  + K +SL  L +  N LTG++P E+  +  LK+  + +N   G IP
Sbjct:  317 LTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIP 428

HSP 5 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 2

Query:   77 NSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            + NLSG +   LG L++L  L L +N + G+IP ELGN  SL  L L +N + G IP +L KL+ L  L L +NR +G+IP E+    SL  + V  N+L G +P
Sbjct:  300 SGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELP 404

HSP 6 Score: 79.7221 bits (195), Expect = 1.733e-14
Identity = 44/109 (40.37%), Postives = 58/109 (53.21%), Query Frame = 2

Query:   65 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            LDL  +   G + P LG    L  L +   N+ GTIP  LG LK+L  L+L  N +SG IP  L    SL  L+LNDN+L G IP  L  +  L+ +++  N   G IP
Sbjct:  272 LDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIP 380

HSP 7 Score: 78.5666 bits (192), Expect = 3.861e-14
Identity = 36/114 (31.58%), Postives = 70/114 (61.40%), Query Frame = 2

Query:   56 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 397
            ++ ++L  +  +G++ P+LG L++L Y+ L +N ++G++P +L N  SL   D+  N+++G +P + +  K L  L L++NR +G IP+ L  +  L  + ++ N   G IP+S
Sbjct:  532 LSSINLSRNRFTGQIPPQLGNLQNLGYMNLSRNLLEGSLPAQLSNCVSLERFDVGFNSLNGSVPSNFSNWKGLTTLVLSENRFSGGIPQFLPELKKLSTLQIARNAFGGEIPSS 645

HSP 8 Score: 77.7962 bits (190), Expect = 6.586e-14
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 2

Query:   53 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 397
            ++  L+L  +  SG +  E+ K + L  L +Y+NN+ G +PVE+  +K L    L+NN+  G IPP L    SL  +    N+LTG+IP  L     L+++++ SN L GTIP S
Sbjct:  364 KLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIPPNLCHGRKLRILNLGSNLLHGTIPAS 478

HSP 9 Score: 77.411 bits (189), Expect = 8.602e-14
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 2

Query:   65 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            L L ++ L G +   LGKL  L+ LEL++N   G IP+E+   +SL  L +Y NN++G++P  + ++K L    L +N   G IP  L   SSL+ VD   N L G IP
Sbjct:  344 LKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIP 452

HSP 10 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 2

Query:   56 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLI-SLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS--GPFEHIPLNNFENNPRL 448
            +T L L  +  SG +   L +L+ L  L++ +N   G IP  +G ++ LI  LDL  N ++G+IP  L  L  L  L +++N LTG +   L G++SL  VDVS+N   G IP +  G     P ++F  NP L
Sbjct:  604 LTTLVLSENRFSGGIPQFLPELKKLSTLQIARNAFGGEIPSSIGLIEDLIYDLDLSGNGLTGEIPAKLGDLIKLTRLNISNNNLTGSL-SVLKGLTSLLHVDVSNNQFTGPIPDNLEGQLLSEP-SSFSGNPNL 735

HSP 11 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 2

Query:   56 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGP 457
            +T+L +  +NL+G L  E+ +++ L+   L+ N+  G IP  LG   SL  +D   N ++G+IPP+L   + L  L L  N L G IP  +    +++   +  N+L G +P       +   +F +N   EGP
Sbjct:  389 LTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIPPNLCHGRKLRILNLGSNLLHGTIPASIGHCKTIRRFILRENNLSGLLPEFSQDHSLSFLDFNSN-NFEGP 521

[Close]

BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.484e-23
Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 2

Query:    8 VNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            V+PCTW  + C+ +  V  L++ +  LSG L   +G+L HL  L L  N + G IP ELG L  L +LDL  N  SG+IP SL  L  L +LRL+ N L+GQ+P  + G+S L  +D+S N+L G  P
Sbjct:   65 VDPCTWNMVGCSSEGFVVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSFNNLSGPTP 192

[Close]

BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.551e-23
Identity = 58/149 (38.93%), Postives = 87/149 (58.39%), Query Frame = 2

Query:   14 PCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIPLNNFENNPRLEGP 457
            PC+W+ ITC+ DNRV  + + ++ L+   +P+L  L  LQ+L L   N+ G IP   G L  L  LDL +N++SG IP  L +L +L FL LN N+L+G IP ++  + +L+V+ +  N L G+IP+S G    +       N  L GP
Sbjct:   55 PCSWYGITCSADNRVISVSIPDTFLNLSSIPDLSSLSSLQFLNLSSTNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQFLILNANKLSGSIPSQISNLFALQVLCLQDNLLNGSIPSSFGSLVSLQQFRLGGNTNLGGP 203

HSP 2 Score: 87.4261 bits (215), Expect = 8.312e-17
Identity = 51/112 (45.54%), Postives = 64/112 (57.14%), Query Frame = 2

Query:   56 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            +T L    S LSG +    G L +LQ L LY   I GTIP +LG    L +L L+ N ++G IP  L KL+ +  L L  N L+G IP E+   SSL V DVS+NDL G IP
Sbjct:  214 LTTLGFAASGLSGSIPSTFGNLVNLQTLALYDTEISGTIPPQLGLCSELRNLYLHMNKLTGSIPKELGKLQKITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIP 325

HSP 3 Score: 86.6557 bits (213), Expect = 1.418e-16
Identity = 51/136 (37.50%), Postives = 74/136 (54.41%), Query Frame = 2

Query:   56 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNN------------------------IQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            + RL +G + LSG++  E+G+L++L +L+LY N+                        I G IP +LGNL +L  LDL  N+ +G IP S   L  L  L LN+N LTGQIP+ +  +  L ++D+S N L G IP
Sbjct:  454 LVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIP 589

HSP 4 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 2

Query:   50 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 394
            + +  L L  + L+G +  ELGKL+ +  L L+ N++ G IP E+ N  SL+  D+  N+++G IP  L KL  L  L+L+DN  TGQIP EL   SSL  + +  N L G+IP+
Sbjct:  260 SELRNLYLHMNKLTGSIPKELGKLQKITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPS 374

HSP 5 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = 2

Query:   65 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKV-VDVSSNDLCGTIP 391
            LD+ N+ ++G +  +LG L +L+ L+L +N+  G IP+  GNL  L  L L NN ++G+IP S+  L+ L  L L+ N L+G+IP+EL  ++SL + +D+S N   G IP
Sbjct:  505 LDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIPQELGQVTSLTINLDLSYNTFTGNIP 614

HSP 6 Score: 82.4185 bits (202), Expect = 2.674e-15
Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 2

Query:   62 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 397
            +L L ++  +G++  EL     L  L+L KN + G+IP ++GNLKSL S  L+ N+ISG IP S      LV L L+ N+LTG+IP EL  +  L  + +  N L G +P S
Sbjct:  336 QLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKS 447

HSP 7 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 2

Query:   65 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            L L  + LSG +  ++G L+ LQ   L++N+I GTIP   GN   L++LDL  N ++G+IP  L  LK L  L L  N L+G +P+ +    SL  + V  N L G IP
Sbjct:  361 LQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIP 469

HSP 8 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 42/115 (36.52%), Postives = 71/115 (61.74%), Query Frame = 2

Query:   53 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 397
            R+++L L  ++LSG L   + K + L  L + +N + G IP E+G L++L+ LDLY N+ SG +P  ++ +  L  L +++N +TG IP +L  + +L+ +D+S N   G IP S
Sbjct:  429 RLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLS 543

HSP 9 Score: 78.5666 bits (192), Expect = 3.861e-14
Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 2

Query:   65 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            LDL  + L+GR+  EL  L+ L  L L  N++ G +P  +   +SL+ L +  N +SG+IP  + +L++LVFL L  N  +G +P E+  I+ L+++DV +N + G IP
Sbjct:  409 LDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIP 517

HSP 10 Score: 77.7962 bits (190), Expect = 6.586e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 2

Query:   68 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            D+  ++L+G +  +LGKL  L+ L+L  N   G IP EL N  SLI+L L  N +SG IP  +  LKSL    L +N ++G IP      + L  +D+S N L G IP
Sbjct:  314 DVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIP 421

HSP 11 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = 2

Query:   53 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 397
            ++T L L  ++LSG + PE+     L   ++  N++ G IP +LG L  L  L L +N  +G+IP  L+   SL+ L+L+ N+L+G IP ++  + SL+   +  N + GTIP+S
Sbjct:  285 KITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSS 399

HSP 12 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = 2

Query:   62 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL-VFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFE-----HIPLNNF 430
            +LDL  ++ +G +    G L +L  L L  N + G IP  + NL+ L  LDL  N++SG+IP  L ++ SL + L L+ N  TG IP     ++ L+ +D+SSN L G I   G        +I  NNF
Sbjct:  528 QLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIPQELGQVTSLTINLDLSYNTFTGNIPETFSDLTQLQSLDLSSNSLHGDIKVLGSLTSLASLNISCNNF 656

[Close]

BLAST of CX301802 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23
Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 2

Query:    8 VNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 391
            V+PC+W  I+C+ DN V  L   + +LSG L   +G L +L+ + L  NNI G IP E+ +L  L +LDL NN  SG+IP S+ +L +L +LRLN+N L+G  P  L  I  L  +D+S N+L G +P
Sbjct:   60 VDPCSWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLRGPVP 187

The following BLAST results are available for this feature:

BLAST of CX301802 vs. ExPASy Swiss-Prot

BLAST of CX301802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104


Match Name	E-value	Identity	Description
SERK1_ARATH	1.315e-46	60.53	Somatic embryogenesis receptor kinase 1 OS=Arabido...	[more]
BAK1_ARATH	1.315e-46	61.38	BRASSINOSTEROID INSENSITIVE 1-associated receptor ...	[more]
SERK2_ARATH	6.526e-46	58.55	Somatic embryogenesis receptor kinase 2 OS=Arabido...	[more]
SERK4_ARATH	5.524e-45	59.48	Somatic embryogenesis receptor kinase 4 OS=Arabido...	[more]
SERK5_ARATH	5.717e-42	56.77	Somatic embryogenesis receptor kinase 5 OS=Arabido...	[more]
Y5129_ARATH	1.157e-26	45.83	Probable LRR receptor-like serine/threonine-protei...	[more]
PEPR1_ARATH	1.083e-24	42.68	Leucine-rich repeat receptor-like protein kinase P...	[more]
Y5457_ARATH	3.484e-23	43.75	Probable LRR receptor-like serine/threonine-protei...	[more]
Y1341_ARATH	4.551e-23	38.93	Probable LRR receptor-like serine/threonine-protei...	[more]
Y2239_ARATH	7.762e-23	43.75	Probable LRR receptor-like serine/threonine-protei...	[more]

Pages

Properties


Property Name	Value
Genbank description	C08013G05SK PhyRootSw1 Citrus sinensis cDNA clone C08013G05, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX301802 ID=CX301802; Name=CX301802; organism=Citrus sinensis; type=EST; length=726bp
AACTCTCGTCAATCCCTGCACTTGGTTTCACATAACCTGTAATCAGGACA
ACCGCGTTACCCGACTGGATTTGGGTAATTCAAATCTATCCGGCCGTCTC
GTCCCTGAACTGGGCAAGCTCGAGCATTTGCAATACCTGGAACTTTACAA
AAACAACATCCAAGGAACTATCCCTGTCGAGCTCGGTAACTTGAAGAGCC
TCATCAGCTTGGACTTGTATAATAACAACATCTCGGGGAAAATCCCTCCT
TCCTTGGCTAAATTGAAATCTCTTGTTTTTTTGCGGCTTAACGATAATCG
GCTAACTGGACAAATTCCCAGGGAACTTGTTGGAATTTCAAGTCTCAAAG
TTGTGGATGTTTCAAGCAATGATCTGTGTGGAACAATTCCTACAAGCGGA
CCATTTGAACACATCCCACTCAACAACTTTGAGAATAACCCTCGATTAGA
AGGTCCAGAGTTGCTGGGACTTGCAAGTTATGACACAAACTGCTCATAAA
CGATTGATTGTTGCTTCAAGCTCTACTCAGGTTTCGAATAGATGTGTCCG
CGAAGATTGAAAGCGTCTTTACCTAAAAAGCATAGTGTTATTGGTGAAAT
GAAGCCATCATATATGTAAATTGTATTATACTGCTTAAATGCATCTGTAA
TAGCATCGTTGTGATCTTCATAAAAATGTTTCAACTTTCAAGATGAGAAT
TTTATTGATGTAAATACATACTAGCC