CX301775

Overview
NameCX301775
Unique NameCX301775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: ETHE1_MOUSE (Protein ETHE1, mitochondrial OS=Mus musculus GN=Ethe1 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44
Identity = 88/144 (61.11%), Postives = 107/144 (74.31%), Query Frame = 2
Query:  254 PLIFRQYFEGSSSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGRTD 685
            P++ RQ FE  S TYTYLL D ++REA+LIDPVLET  RD Q IK+LGL+L Y +NTH HADHITG+G L+      +SVIS  SGAQAD+HI E D I FG + +   A+PGHT GC+++VL+D S  FTGD LLIRGCGRTD
Sbjct:   22 PVLLRQMFEPKSCTYTYLLGDRESREAVLIDPVLETAHRDAQLIKELGLKLLYAVNTHCHADHITGTGVLRSLLPGCQSVISRLSGAQADLHIGEGDSIRFGRFALETRASPGHTPGCVTFVLNDQSMAFTGDALLIRGCGRTD 165          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: ETHE1_BOVIN (Protein ETHE1, mitochondrial OS=Bos taurus GN=ETHE1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.252e-44
Identity = 87/144 (60.42%), Postives = 107/144 (74.31%), Query Frame = 2
Query:  254 PLIFRQYFEGSSSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGRTD 685
            P++ RQ FE  S TYTYLL D ++REA+LIDPVLET  RD Q +K+LGL L Y +NTH HADHITGSG L+      +SVIS  SGAQAD HI++ D I+FG + +   A+PGHT GC+++VL+D S  FTGD LLIRGCGRTD
Sbjct:   22 PVLLRQMFEPKSCTYTYLLGDRESREAVLIDPVLETAQRDAQLVKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADWHIEDGDSIQFGRFALETRASPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTD 165          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: ETHE1_HUMAN (Protein ETHE1, mitochondrial OS=Homo sapiens GN=ETHE1 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 7.254e-44
Identity = 87/144 (60.42%), Postives = 107/144 (74.31%), Query Frame = 2
Query:  254 PLIFRQYFEGSSSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGRTD 685
            P++ RQ FE  S T+TYLL D ++REA+LIDPVLET  RD Q IK+LGL L Y +NTH HADHITGSG L+      +SVIS  SGAQAD+HI++ D I FG + +   A+PGHT GC+++VL+D S  FTGD LLIRGCGRTD
Sbjct:   22 PILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHSMAFTGDALLIRGCGRTD 165          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2O_ARATH (Hydroxyacylglutathione hydrolase 3, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.264e-36
Identity = 79/151 (52.32%), Postives = 104/151 (68.87%), Query Frame = 2
Query:  257 LIFRQYFEGSSSTYTYLLADAK--TREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLS------RVFTGDTLLIRGCGRTD 685
            L+FRQ FE  SST+TYLLAD     + A+LIDPV +TVDRDL+ I +LGL+L Y +NTH+HADH+TG+G LK +    KSVIS  SG++AD+ ++  D +  G   +   ATPGHT GC++YV  + +        FTGD +LIRGCGRTD
Sbjct:   14 LLFRQLFENESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTD 164          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_SYNJA (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gloB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 45/136 (33.09%), Postives = 67/136 (49.26%), Query Frame = 2
Query:  296 YTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQAD--------IHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGR 679
            Y YLL D +T  A ++DP +   +  L ++ +LG EL    NTH H DH+ G+ QL  R   A     +  G+QAD        + +   + + F   +   +  PGHT G ++Y   +   +F GDTL   GCGR
Sbjct:   13 YIYLLHDPETATAAVVDPTV--AEPVLDKLAELGAELVAIFNTHHHHDHVGGNLQLLARYPRA-----VVYGSQADRGRIPGQTVELQAGETVAFAGRQAKVLFVPGHTRGHVAYYFPESGDLFCGDTLFAGGCGR 141          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_SYNJB (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 2
Query:  296 YTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQAD--------IHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGR 679
            Y YLL +  T  A ++DP +   +  L+++ +LG EL    NTH H DH+ G+ QL  R   A+       G+Q D        + +   + +EF       +  PGHT G I+Y   +   +F GDTL   GCGR
Sbjct:   13 YIYLLHNPDTATAAVVDPAV--AEPVLEKLAELGAELVAIFNTHHHHDHVGGNRQLLERYPRARVY-----GSQVDRGRIPGQTVELKAGETVEFAGRLAKVLFVPGHTRGHIAYYFSESGDLFCGDTLFAGGCGR 141          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS4 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  287 SSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSAN--AKSVISIHSGAQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGR 679
            S  Y +L+ DA T E  ++D  +      L+ +++ G  L   L TH H+DH+ G  +L+  +    A +    H     D+ + E D +  G+     +  PGHT G I++   D S  FTGD+L+  GCGR
Sbjct:   12 SDNYAFLVHDAGTGETSVVD--VPEAGPILKALEERGWHLSQILLTHHHSDHVAGVEELRAATGARVAGAAADAHRLPPLDLELAEGDLVRVGASEGRVIEVPGHTVGHIAFHFPDSSLAFTGDSLMAMGCGR 142          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS1 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  287 SSTYTYLLADAKTREAILIDPVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSAN--AKSVISIHSGAQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGR 679
            S  Y +L+ DA T E  ++D  +      L+ +++ G  L   L TH H+DH+ G  +L+  +    A +    H     D+ + E D +  G+     +  PGHT G I++   D S  FTGD+L+  GCGR
Sbjct:   12 SDNYAFLVHDAGTGETSVVD--VPEAGPVLKALEERGWHLSQILLTHHHSDHVAGVEELRAATGARVAGAAADAHRLPPLDLELAEGDLVRVGASEGRVIEVPGHTVGHIAFHFPDSSLAFTGDSLMAMGCGR 142          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_OCHA4 (Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 55/151 (36.42%), Postives = 72/151 (47.68%), Query Frame = 2
Query:  254 PLIFRQYFEGSSSTYTYLLADAKTREAILID-PVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSGAQA--------DIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGR 679
            P +  + F   S  Y  L+ D ++     ID P    ++  L   K  G  L +   TH H DH+ G+  LK     AK  +SI  G +A        D  + + D   FG +RV  +ATPGHT G +SY L D   VFTGDTL   GCGR
Sbjct:    6 PRLEIEQFICRSDNYGVLIHDPQSALTASIDAPDAAAIEAAL---KRRGWTLDFIFTTHHHLDHVEGNEALK-----AKYGVSI-IGPKAEETKIPGIDRTVKDGDEFTFGLFRVKVIATPGHTAGEVSYYLPDAKAVFTGDTLFALGCGR 147          
BLAST of CX301775 vs. ExPASy Swiss-Prot
Match: GLO2_BRAJA (Hydroxyacylglutathione hydrolase OS=Bradyrhizobium japonicum GN=gloB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 48/144 (33.33%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  275 FEGSSSTYTYLLADAKTREAILID-----PVLETVDRDLQQIKDLGLELKYTLNTHLHADHITGSGQLKLRSANAKSVISIHSG----AQADIHIDEFDFIEFGSWRVYAVATPGHTDGCISYVLDDLSRVFTGDTLLIRGCGR 679
            F   +  + YL+ D +T+    ID     P+L+ ++R+  Q+ D+       L TH H DH+ G  +LK    N + V++ H      A  D+ +   D ++ G+     V TPGHT   ISYV D    VF  DTL   GCGR
Sbjct:    8 FSCLNDNFGYLIHDVETKATASIDAPEAGPILKALEREGWQLTDI-------LITHHHGDHVGGVAELK-HKYNCR-VVAPHDKTTAIANVDLRVANADVVKVGNLLARVVETPGHTLDHISYVFDTEKTVFAADTLFSIGCGR 142          
The following BLAST results are available for this feature:
BLAST of CX301775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ETHE1_MOUSE2.493e-4461.11Protein ETHE1, mitochondrial OS=Mus musculus GN=Et... [more]
ETHE1_BOVIN4.252e-4460.42Protein ETHE1, mitochondrial OS=Bos taurus GN=ETHE... [more]
ETHE1_HUMAN7.254e-4460.42Protein ETHE1, mitochondrial OS=Homo sapiens GN=ET... [more]
GLO2O_ARATH3.264e-3652.32Hydroxyacylglutathione hydrolase 3, mitochondrial ... [more]
GLO2_SYNJA1.129e-1233.09Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SYNJB3.286e-1233.09Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_RHOS43.286e-1231.58Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_RHOS13.286e-1231.58Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_OCHA43.286e-1236.42Hydroxyacylglutathione hydrolase OS=Ochrobactrum a... [more]
GLO2_BRAJA7.321e-1233.33Hydroxyacylglutathione hydrolase OS=Bradyrhizobium... [more]

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Properties
Property NameValue
Genbank descriptionC08013E02SK PhyRootSw1 Citrus sinensis cDNA clone C08013E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301775 ID=CX301775; Name=CX301775; organism=Citrus sinensis; type=EST; length=686bp
GAATTCGGCACGAGGCCGTATTTACAAGACCTTTGAGCACAATTTGTTGA
GTTTACCTGTGCCTGTTTTGATCTCTGGCGACTCTTTAGACTTCAACACT
GCTGCTTTACTCAGCTTTCTCGCTGTTTCTCATCGAATTCATAAGGATCA
GATTCATGCAGTGGCTGGAAGACTTCACCTTCAACACTATGAACAAGAGC
CAAGACTCGTTACATGGCTTCACACGGTCATCGAACATTATTTCATCAAG
AATCCTTTAATTTTTAGACAATATTTTGAAGGATCTTCATCGACTTATAC
ATATCTATTAGCTGATGCGAAGACAAGGGAAGCAATTCTCATCGATCCTG
TTCTCGAGACTGTTGACAGAGATTTGCAACAGATTAAAGATCTAGGATTA
GAGTTAAAATATACTCTTAACACTCATCTTCATGCTGATCACATCACAGG
CTCAGGACAACTAAAACTCAGAAGTGCGAATGCAAAATCCGTAATCTCGA
TTCATTCTGGCGCTCAAGCTGATATTCATATTGATGAATTTGATTTTATT
GAGTTTGGATCATGGAGGGTGTATGCTGTAGCCACACCTGGACATACTGA
TGGATGCATTTCTTATGTCTTAGATGACCTTTCTCGAGTATTTACTGGTG
ATACTCTATTGATTCGTGGATGTGGTCGCACTGACT
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