CX301764

Overview
NameCX301764
Unique NameCX301764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6531 contig Csv1_Contig6531:7..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: OPD22_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 6.615e-48
Identity = 89/102 (87.25%), Postives = 96/102 (94.12%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KAK NSLKP+DYEGGTFTV+NLGGPFGIKQFCA+INPPQ+ ILA+GSAEKRVVPG GPDQY  +S+MSVTLSCDHRVIDGAIGAEWLKAFKGYIE PESMLL
Sbjct:  438 KAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVINPPQAAILAIGSAEKRVVPGTGPDQYNVASYMSVTLSCDHRVIDGAIGAEWLKAFKGYIETPESMLL 539          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: OPD23_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.474e-47
Identity = 87/102 (85.29%), Postives = 97/102 (95.10%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KAK NSLKP+DYEGGTFTV+NLGGPFGIKQFCA++NPPQ+ ILAVGSAEKRVVPG GPDQ+ F+S+M VTLSCDHRV+DGAIGAEWLKAFKGYIENP+SMLL
Sbjct:  438 KAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEKRVVPGNGPDQFNFASYMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_DICDI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=pdhC PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.173e-28
Identity = 62/103 (60.19%), Postives = 79/103 (76.70%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQ-YKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+   L P ++E GTFT++NLG   GIKQF A+INPPQ+ ILAVG+ E RVV    PD  Y+ ++ +SVTLSCDHRVIDGA+GAEWLK+FK Y+ENP  ++L
Sbjct:  534 KAQNGKLHPSEFESGTFTISNLG-MLGIKQFAAVINPPQAAILAVGTTETRVVLSNKPDSPYETATILSVTLSCDHRVIDGAVGAEWLKSFKDYVENPIKLIL 635          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_RAT (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus GN=Dlat PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 57/102 (55.88%), Postives = 78/102 (76.47%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+   L+P +++GGTFT++NLG  FGIK F AIINPPQ+ ILA+G++E +++P      +  +S MSVTLSCDHRV+DGA+GA+WL  FK Y+E P +MLL
Sbjct:  532 KAREGKLQPHEFQGGTFTISNLG-MFGIKNFSAIINPPQACILAIGASEDKLIPADNEKGFDVASVMSVTLSCDHRVVDGAVGAQWLAEFKKYLEKPVTMLL 632          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_MOUSE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dlat PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 57/102 (55.88%), Postives = 78/102 (76.47%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+   L+P +++GGTFT++NLG  FGIK F AIINPPQ+ ILA+G++E +++P      +  +S MSVTLSCDHRV+DGA+GA+WL  FK Y+E P +MLL
Sbjct:  542 KAREGKLQPHEFQGGTFTISNLG-MFGIKNFSAIINPPQACILAIGASEDKLIPADNEKGFDVASVMSVTLSCDHRVVDGAVGAQWLAEFKKYLEKPITMLL 642          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_HUMAN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DLAT PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 2.890e-27
Identity = 57/102 (55.88%), Postives = 78/102 (76.47%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+   L+P +++GGTFT++NLG  FGIK F AIINPPQ+ ILA+G++E ++VP      +  +S MSVTLSCDHRV+DGA+GA+WL  F+ Y+E P +MLL
Sbjct:  547 KAREGKLQPHEFQGGTFTISNLG-MFGIKNFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL 647          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_RICBR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia bellii (strain RML369-C) GN=pdhC PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KA+ N L P++++GG FT++NLG  +GIK F AIINPPQS I+ VGS+ KR +  +  DQ   ++ M VTLS DHRV+DGA+GAE+L AFK +IE+P  MLL
Sbjct:  317 KARENKLTPEEFQGGGFTISNLG-MYGIKNFNAIINPPQSCIMGVGSSSKRAI--VKNDQISIATIMDVTLSADHRVVDGAVGAEFLAAFKRFIESPALMLL 415          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_RICFE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia felis GN=pdhC PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KAK N L P++++GG FT++NLG  +GIK F AIINPPQS I+ VG++ KR +  +  DQ   ++ M VTLS DHRV+DGA+GAE+L AFK +IE+P  ML+
Sbjct:  314 KAKDNKLTPEEFQGGGFTISNLG-MYGIKNFNAIINPPQSCIMGVGASAKRAI--VKNDQVTIATIMDVTLSADHRVVDGAVGAEFLAAFKKFIESPALMLI 412          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_RICCN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia conorii GN=pdhC PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            KAK N L P++++GG FT++NLG  +GIK F AIINPPQS I+ VG++ KR +  +  DQ   ++ M VTLS DHRV+DGA+GAE+L AFK +IE+P  ML+
Sbjct:  314 KAKDNKLTPEEFQGGGFTISNLG-MYGIKNFNAIINPPQSCIMGVGASAKRAI--VKNDQITIATIMDVTLSADHRVVDGAVGAEFLVAFKKFIESPVLMLI 412          
BLAST of CX301764 vs. ExPASy Swiss-Prot
Match: ODP2_CAEEL (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Caenorhabditis elegans GN=F23B12.5 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23
Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 3
Query:    3 KAKYNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 308
            +A+   L+P +++GGTFTV+NLG    +  F AIINPPQS ILA+G A  ++VP    + YK    M VTLSCDHR +DGA+GA WL+ FK ++E P +MLL
Sbjct:  407 RAREGKLQPHEFQGGTFTVSNLGMFGSVSDFTAIINPPQSCILAIGGASDKLVPD-EAEGYKKIKTMKVTLSCDHRTVDGAVGAVWLRHFKEFLEKPHTMLL 507          
The following BLAST results are available for this feature:
BLAST of CX301764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
OPD22_ARATH6.615e-4887.25Dihydrolipoyllysine-residue acetyltransferase comp... [more]
OPD23_ARATH1.474e-4785.29Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_DICDI1.173e-2860.19Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RAT1.694e-2755.88Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_MOUSE2.212e-2755.88Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_HUMAN2.890e-2755.88Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICBR2.990e-2455.88Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICFE1.136e-2354.90Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICCN1.938e-2354.90Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_CAEEL1.938e-2351.96Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Properties
Property NameValue
Genbank descriptionC08013D03SK PhyRootSw1 Citrus sinensis cDNA clone C08013D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301764 ID=CX301764; Name=CX301764; organism=Citrus sinensis; type=EST; length=701bp
AGAAAGCCAAATACAACAGCTTGAAACCACAAGATTATGAGGGAGGCACA
TTCACAGTTACCAATTTGGGAGGACCCTTCGGCATCAAGCAATTCTGTGC
CATTATCAATCCTCCTCAATCTGGCATTCTTGCAGTTGGATCTGCTGAGA
AAAGGGTTGTCCCTGGCTTGGGTCCAGATCAGTACAAATTTTCTTCCTTC
ATGTCGGTAACATTAAGTTGTGATCATCGCGTAATAGATGGTGCGATTGG
TGCTGAATGGTTGAAAGCATTCAAAGGATACATTGAGAATCCGGAGTCCA
TGTTGCTATAAGCCAAACTCTTCTTTTTCTAAGTTGAGAAGCTCTTTCCT
AGCTGTATCAGTTTAGATGGGGGCTTCAGTTCAACCCCTTCCACCTGGGA
TCAGATTGGCATGGTTGTGTCACTGAGCACATCTTGATTTTGTTTTTCAA
TTGGTAAACACTTTTATGCAAAATTTTTGGAATAAAAGCAGGGGATCGAG
GCATGAAACCAATCCTTAAACTCATACTCATCCTTGATAGGGTGTTCAAC
AAGGTGTTCTGCTATCGACCTTTCCTTAATGGATTTTTGGGTTACATACG
TGATGAACATGATTTTAGTAGAGTGTAATCGCCTCTTTCATGCGGGTAAT
AATTTGATTTATATATATTTTTTGGATTTTCCATTACCAGTGTTGTGTGA
A
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