CX301763

Overview
NameCX301763
Unique NameCX301763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length536
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301763 vs. ExPASy Swiss-Prot
Match: TYPX_TRYBB (Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27
Identity = 65/137 (47.45%), Postives = 84/137 (61.31%), Query Frame = 3
Query:   54 SLKTKAGTASTEEALVGKKLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDASNLEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASARNTVTESNGDLDDALSQW 464
            +L +K+G  S   +LVGK  V +YFSA WCPPCRGFTP+LAEFY   K   A N E++ I+ D +E+ F+DYY  MPWLAL    +S +  L + FGV  IPT + +N +TG +I   AR  V E   D D A   W
Sbjct:   13 NLLSKSGEVSLG-SLVGKT-VFLYFSASWCPPCRGFTPVLAEFYE--KHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIE---DPDGANFPW 142          
BLAST of CX301763 vs. ExPASy Swiss-Prot
Match: NXN_DANRE (Nucleoredoxin OS=Danio rerio GN=nxn PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.137e-22
Identity = 53/128 (41.41%), Postives = 75/128 (58.59%), Query Frame = 3
Query:   81 STEEALVGKKLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDASNLEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASARNTVTESNGDLDDALSQW 464
            +T+   +    VGVYFSAHWCPPCR  T +L E Y  VK+      EI+F+++DR E SF  Y+S MPWLA+ +S+++    L   +G++GIPT ++L+ E G +I    R    E   D D  L  W
Sbjct:  168 TTDSTALEGSYVGVYFSAHWCPPCRSLTRVLVESYRKVKET-GQKFEIVFVSADRSEESFTQYFSEMPWLAVPYSDEARRSRLNRLYGIQGIPTLILLDTE-GHMITRQGR---VEILNDPDCGLFPW 290          

HSP 2 Score: 68.5514 bits (166), Expect = 2.217e-11
Identity = 47/152 (30.92%), Postives = 68/152 (44.74%), Query Frame = 3
Query:   21 MVAWQTELFGESLKTKAGTASTEEALVGK-KLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDA--SNLEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASARNTVTESNGDLDDALSQWG 467
            M  +   L GE L          +AL  +  L+G+YF      PC+ F   L EFY+  KK       LEI+FI+SD+D+  + D+   M W AL   ++     L  K+ V  IP+ V ++  TG V+    RN +     D       WG
Sbjct:    1 MSEFLVNLLGERLVNGEKAEVDVQALGSRLSLLGLYFGCSLNGPCKQFNASLTEFYSKFKKSSEHKDKLEIVFISSDQDQKQWQDFLQEMQWPALPFKDRHKKMKLWNKYKVTSIPSLVFIDAATGKVV---CRNGLLVVRDDPKGLEFPWG 149          
BLAST of CX301763 vs. ExPASy Swiss-Prot
Match: NXN_HUMAN (Nucleoredoxin OS=Homo sapiens GN=NXN PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 6.218e-22
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 3
Query:   81 STEEALVGKKLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDASNLEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASAR 413
            S E + +    VGVYFSAHWCPPCR  T +L E Y  +K+    N EIIF+++DR E SF  Y+S MPWLA+ +++++    L   +G++GIPT ++L+ + G VI    R
Sbjct:  185 SLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEA-GQNFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQ-GEVITRQGR 293          

HSP 2 Score: 68.9366 bits (167), Expect = 1.697e-11
Identity = 48/169 (28.40%), Postives = 73/169 (43.20%), Query Frame = 3
Query:   21 MVAWQTELFGESLKTKAGTASTEEALV--GKKLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDASN------------------LEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASARNTVTESNGDLDDALSQWG 467
            M  +  EL GE L T  G      +L   G  L+G+YF      PC   +  LA FY  ++   A+                   LEI+F++SD+D+  + D+   MPWLAL +  +     L  K+ +  IP+ + L+  TG V+    RN +     D +     WG
Sbjct:    1 MSGFLEELLGEKLVTGGGEEVDVHSLGARGISLLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRISNIPSLIFLDATTGKVV---CRNGLLVIRDDPEGLEFPWG 166          
BLAST of CX301763 vs. ExPASy Swiss-Prot
Match: NXN_MOUSE (Nucleoredoxin OS=Mus musculus GN=Nxn PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.809e-21
Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = 3
Query:   81 STEEALVGKKLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDASNLEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASAR 413
            S E + +    VGVYFSAHWCPPCR  T +L E Y  +K+      EIIF+++DR E SF  Y+S MPWLA+ +++++    L   +G++GIPT ++L+ + G VI    R
Sbjct:  185 SLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEA-GQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQ-GEVITRQGR 293          

HSP 2 Score: 67.781 bits (164), Expect = 3.781e-11
Identity = 48/169 (28.40%), Postives = 73/169 (43.20%), Query Frame = 3
Query:   21 MVAWQTELFGESLKTKAGTASTEEALV--GKKLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDASN------------------LEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASARNTVTESNGDLDDALSQWG 467
            M  +  EL G+ L T  G      +L   G  L+G+YF      PC   +  LA FY  ++   A+                   LEI+F++SD+D+  + D+   MPWLAL +  +     L  K+ V  IP+ + L+  TG V+    RN +     D +     WG
Sbjct:    1 MSGFLEELLGDKLVTGGGEEVDVHSLGARGIALLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGAGAGAGAAAEPEPRHRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDATTGKVV---CRNGLLVIRDDPEGLEFPWG 166          
BLAST of CX301763 vs. ExPASy Swiss-Prot
Match: NXN_BOVIN (Nucleoredoxin OS=Bos taurus GN=NXN PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.363e-21
Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = 3
Query:   81 STEEALVGKKLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDASNLEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASAR 413
            S E + +    VGVYFSAHWCPPCR  T +L E Y  +K+      EIIF+++DR E SF  Y+S MPWLA+ +++++    L   +G++GIPT ++L+ + G VI    R
Sbjct:  185 SLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEA-GQKFEIIFVSADRSEDSFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQ-GEVITRQGR 293          

HSP 2 Score: 68.5514 bits (166), Expect = 2.217e-11
Identity = 47/169 (27.81%), Postives = 73/169 (43.20%), Query Frame = 3
Query:   21 MVAWQTELFGESLKTKAGTASTEEALV--GKKLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDASN------------------LEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASARNTVTESNGDLDDALSQWG 467
            M  +  EL GE L T  G      +L   G  L+G+YF      PC   +  LA FY  ++   A+                   LEI+F++SD+D+  + D+   MPWLAL +  +     L  K+ +  IP+ + L+  +G V+    RN +     D +     WG
Sbjct:    1 MSGFLEELLGEKLVTGGGEEVDVHSLAARGISLLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGPGPGAGASAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRISNIPSLIFLDATSGKVV---CRNGLLVIRDDPEGLEFPWG 166          
BLAST of CX301763 vs. ExPASy Swiss-Prot
Match: NXN_XENLA (Nucleoredoxin OS=Xenopus laevis GN=nxn PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.456e-20
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 3
Query:   81 STEEALVGKKLVGVYFSAHWCPPCRGFTPILAEFYNDVKKRDASNLEIIFITSDRDEASFNDYYSSMPWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASAR 413
            S E + +    VG+YFSA+WCPPCR  T +L E Y  +K+      EI+ +++DR E SF  Y+S MPWLA+ +S+++    L   +G++GIP  +IL+ + G VI    R
Sbjct:  164 SQESSTLEGSYVGIYFSAYWCPPCRSLTRVLVESYRKIKE-SGQKFEIVLVSADRSEESFKQYFSEMPWLAVPYSDEARRSRLNRLYGIQGIPNLIILDPK-GEVITRQGR 272          
BLAST of CX301763 vs. ExPASy Swiss-Prot
Match: NXNL2_MOUSE (Nucleoredoxin-like protein 2 OS=Mus musculus GN=Nxnl2 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.423e-11
Identity = 40/133 (30.08%), Postives = 67/133 (50.38%), Query Frame = 3
Query:   42 LFGESLKTKAGTASTEEALVGKKLVGVYFSAHWCPPCRGFTPILAEFYNDV--KKRDASNLEIIFITSDRDEASFNDYYSSM--PWLALEHSNQSLIKALKEKFGVRGIPTFVILNGETGGVIDASARNTVTE 428
            L G  L T+ GT    E  +  K+V +YF+A  C P R FTP+L +FY ++  + R  +  E++F+++D       D+   +   WLAL   +      LK+++ +  IP  V++  + G VI    R  + E
Sbjct:    5 LGGRRLVTREGTVVEAEVALQNKVVALYFAAGRCSPSRDFTPLLCDFYTELVSEARRPAPFEVVFVSADGSAEEMLDFMRELHGSWLALPF-HDPYRHELKKRYEITAIPKLVVIK-QNGAVITNKGRKQIRE 135          
The following BLAST results are available for this feature:
BLAST of CX301763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TYPX_TRYBB1.293e-2747.45Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=... [more]
NXN_DANRE2.137e-2241.41Nucleoredoxin OS=Danio rerio GN=nxn PE=2 SV=1[more]
NXN_HUMAN6.218e-2244.14Nucleoredoxin OS=Homo sapiens GN=NXN PE=1 SV=2[more]
NXN_MOUSE1.809e-2143.24Nucleoredoxin OS=Mus musculus GN=Nxn PE=1 SV=1[more]
NXN_BOVIN2.363e-2143.24Nucleoredoxin OS=Bos taurus GN=NXN PE=2 SV=1[more]
NXN_XENLA4.456e-2040.54Nucleoredoxin OS=Xenopus laevis GN=nxn PE=2 SV=1[more]
NXNL2_MOUSE8.423e-1130.08Nucleoredoxin-like protein 2 OS=Mus musculus GN=Nx... [more]
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Properties
Property NameValue
Genbank descriptionC08013D02SK PhyRootSw1 Citrus sinensis cDNA clone C08013D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301763 ID=CX301763; Name=CX301763; organism=Citrus sinensis; type=EST; length=536bp
GAATTCGGCACGAGGTGAAGATGGTTGCCTGGCAAACTGAACTATTTGGC
GAATCTTTGAAGACTAAAGCTGGTACAGCTTCCACTGAAGAGGCATTGGT
TGGCAAAAAGCTCGTAGGAGTCTACTTTTCCGCTCATTGGTGTCCACCAT
GTCGAGGCTTTACTCCGATTCTGGCTGAGTTTTACAATGATGTGAAGAAG
CGAGATGCTTCTAATCTAGAGATTATTTTCATCACAAGCGATCGTGATGA
GGCAAGTTTCAATGATTATTATTCCTCAATGCCTTGGCTTGCATTGGAGC
ACTCCAATCAAAGTTTAATTAAAGCCTTAAAGGAAAAATTTGGAGTCAGA
GGCATTCCTACATTTGTCATCTTAAATGGAGAGACAGGCGGAGTCATTGA
TGCTTCTGCTCGAAATACTGTTACTGAATCAAACGGTGATCTCGATGATG
CCTTATCCCAATGGGGAGTTTCTGCTTAATTCCTTTGTTTGTAAATATAA
CTATTCTTTCCCTTTTCCAAAAAAAAAAAAAAAAAA
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